EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015013252 (Gene tree)
Gene ID: 108936633
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11628 bases
Position: chrKV411122.1:1481038-1492665
Accession: 108936633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015020660	ResIII	PF04851.15	9.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015020894	SMARCA5-201	4067	XM_018756125	ENSSFOP00015020660	1028 (aa)	XP_018611641	A0A1W5AFS0

Gene Model

Click here to download ENSSFOG00015013252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015013252	SMARCA5	98	83.481	ENSSFOG00015009043	smarca1	99	83.481
ENSSFOG00015013252	SMARCA5	53	44.928	ENSSFOG00015003649	chd1l	63	44.928
ENSSFOG00015013252	SMARCA5	98	91.733	ENSSFOG00015016794	smarca5	100	93.498
ENSSFOG00015013252	SMARCA5	50	37.625	ENSSFOG00015017895	hells	74	37.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015013252	SMARCA5	97	90.050	ENSG00000153147	SMARCA5	99	85.918	Homo_sapiens
ENSSFOG00015013252	SMARCA5	97	90.352	ENSAMEG00000009585	SMARCA5	95	89.930	Ailuropoda_melanoleuca
ENSSFOG00015013252	SMARCA5	93	91.210	ENSAPLG00000009206	SMARCA5	99	91.210	Anas_platyrhynchos
ENSSFOG00015013252	SMARCA5	95	91.411	ENSACAG00000003038	SMARCA5	100	87.524	Anolis_carolinensis
ENSSFOG00015013252	SMARCA5	97	90.151	ENSANAG00000019345	SMARCA5	99	90.679	Aotus_nancymaae
ENSSFOG00015013252	SMARCA5	97	90.352	ENSBTAG00000003399	SMARCA5	94	90.352	Bos_taurus
ENSSFOG00015013252	SMARCA5	97	90.151	ENSCJAG00000002735	SMARCA5	94	90.151	Callithrix_jacchus
ENSSFOG00015013252	SMARCA5	97	89.930	ENSCAFG00000007525	SMARCA5	95	89.930	Canis_familiaris
ENSSFOG00015013252	SMARCA5	95	90.234	ENSCAFG00020025641	SMARCA5	94	90.234	Canis_lupus_dingo
ENSSFOG00015013252	SMARCA5	97	90.352	ENSCHIG00000013730	-	94	90.352	Capra_hircus
ENSSFOG00015013252	SMARCA5	97	88.744	ENSCHIG00000016375	-	95	89.775	Capra_hircus
ENSSFOG00015013252	SMARCA5	99	88.639	ENSTSYG00000009954	SMARCA5	99	90.241	Carlito_syrichta
ENSSFOG00015013252	SMARCA5	94	90.815	ENSCAPG00000013747	SMARCA5	95	90.815	Cavia_aperea
ENSSFOG00015013252	SMARCA5	97	89.950	ENSCPOG00000002259	SMARCA5	100	86.122	Cavia_porcellus
ENSSFOG00015013252	SMARCA5	97	90.151	ENSCCAG00000027215	SMARCA5	99	90.679	Cebus_capucinus
ENSSFOG00015013252	SMARCA5	97	90.050	ENSCATG00000044917	SMARCA5	94	90.050	Cercocebus_atys
ENSSFOG00015013252	SMARCA5	96	90.578	ENSCLAG00000006153	SMARCA5	99	90.578	Chinchilla_lanigera
ENSSFOG00015013252	SMARCA5	94	91.237	ENSCSAG00000003448	SMARCA5	100	91.237	Chlorocebus_sabaeus
ENSSFOG00015013252	SMARCA5	85	90.444	ENSCHOG00000011724	SMARCA5	83	90.444	Choloepus_hoffmanni
ENSSFOG00015013252	SMARCA5	97	90.452	ENSCPBG00000027535	SMARCA5	96	89.772	Chrysemys_picta_bellii
ENSSFOG00015013252	SMARCA5	97	90.050	ENSCANG00000041629	SMARCA5	94	90.050	Colobus_angolensis_palliatus
ENSSFOG00015013252	SMARCA5	97	89.631	ENSCGRG00001012719	Smarca5	96	88.126	Cricetulus_griseus_chok1gshd
ENSSFOG00015013252	SMARCA5	96	90.679	ENSCGRG00000001417	Smarca5	98	90.679	Cricetulus_griseus_crigri
ENSSFOG00015013252	SMARCA5	96	88.698	ENSDNOG00000009158	SMARCA5	94	88.698	Dasypus_novemcinctus
ENSSFOG00015013252	SMARCA5	92	83.983	ENSDORG00000003466	Smarca5	97	83.983	Dipodomys_ordii
ENSSFOG00015013252	SMARCA5	94	84.004	ENSEBUG00000014773	SMARCA5	96	84.004	Eptatretus_burgeri
ENSSFOG00015013252	SMARCA5	97	90.352	ENSEASG00005001866	SMARCA5	98	91.889	Equus_asinus_asinus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSECAG00000002676	SMARCA5	94	90.352	Equus_caballus
ENSSFOG00015013252	SMARCA5	96	87.437	ENSEEUG00000013176	SMARCA5	99	87.437	Erinaceus_europaeus
ENSSFOG00015013252	SMARCA5	94	92.157	ENSELUG00000014653	SMARCA5	99	92.157	Esox_lucius
ENSSFOG00015013252	SMARCA5	97	90.352	ENSFCAG00000004544	SMARCA5	99	87.140	Felis_catus
ENSSFOG00015013252	SMARCA5	94	92.062	ENSFALG00000004987	SMARCA5	100	92.062	Ficedula_albicollis
ENSSFOG00015013252	SMARCA5	96	90.679	ENSFDAG00000021016	SMARCA5	99	90.679	Fukomys_damarensis
ENSSFOG00015013252	SMARCA5	100	87.440	ENSGMOG00000007519	SMARCA5	100	87.440	Gadus_morhua
ENSSFOG00015013252	SMARCA5	96	91.423	ENSGALG00000009913	SMARCA5	95	91.423	Gallus_gallus
ENSSFOG00015013252	SMARCA5	98	89.583	ENSGACG00000017238	SMARCA5	100	88.201	Gasterosteus_aculeatus
ENSSFOG00015013252	SMARCA5	97	90.040	ENSGAGG00000019882	SMARCA5	98	88.878	Gopherus_agassizii
ENSSFOG00015013252	SMARCA5	97	90.050	ENSGGOG00000012595	SMARCA5	99	90.578	Gorilla_gorilla
ENSSFOG00015013252	SMARCA5	97	81.827	ENSHGLG00000000317	-	95	81.827	Heterocephalus_glaber_female
ENSSFOG00015013252	SMARCA5	97	89.721	ENSHGLG00000000816	-	95	89.631	Heterocephalus_glaber_female
ENSSFOG00015013252	SMARCA5	96	90.578	ENSHGLG00100018421	-	99	90.578	Heterocephalus_glaber_male
ENSSFOG00015013252	SMARCA5	97	90.352	ENSSTOG00000010683	SMARCA5	99	86.948	Ictidomys_tridecemlineatus
ENSSFOG00015013252	SMARCA5	97	89.831	ENSJJAG00000014965	Smarca5	96	89.831	Jaculus_jaculus
ENSSFOG00015013252	SMARCA5	97	91.073	ENSLACG00000007091	SMARCA5	99	89.401	Latimeria_chalumnae
ENSSFOG00015013252	SMARCA5	100	91.359	ENSLOCG00000008966	SMARCA5	100	91.570	Lepisosteus_oculatus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSLAFG00000007795	SMARCA5	94	90.352	Loxodonta_africana
ENSSFOG00015013252	SMARCA5	97	90.050	ENSMFAG00000043649	SMARCA5	94	90.050	Macaca_fascicularis
ENSSFOG00015013252	SMARCA5	97	90.050	ENSMMUG00000000829	SMARCA5	97	91.570	Macaca_mulatta
ENSSFOG00015013252	SMARCA5	97	90.050	ENSMNEG00000031916	SMARCA5	94	90.050	Macaca_nemestrina
ENSSFOG00015013252	SMARCA5	97	90.050	ENSMLEG00000042393	SMARCA5	94	90.050	Mandrillus_leucophaeus
ENSSFOG00015013252	SMARCA5	97	90.891	ENSMGAG00000003517	SMARCA5	99	90.891	Meleagris_gallopavo
ENSSFOG00015013252	SMARCA5	97	89.970	ENSMAUG00000015902	Smarca5	98	89.970	Mesocricetus_auratus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSMICG00000003971	SMARCA5	99	89.638	Microcebus_murinus
ENSSFOG00015013252	SMARCA5	97	89.950	ENSMOCG00000016986	-	95	89.950	Microtus_ochrogaster
ENSSFOG00015013252	SMARCA5	99	88.856	ENSMODG00000000391	SMARCA5	96	88.563	Monodelphis_domestica
ENSSFOG00015013252	SMARCA5	97	89.631	ENSMUSG00000031715	Smarca5	100	86.217	Mus_musculus
ENSSFOG00015013252	SMARCA5	97	89.731	MGP_PahariEiJ_G0022862	Smarca5	100	86.312	Mus_pahari
ENSSFOG00015013252	SMARCA5	97	90.352	ENSMLUG00000000468	SMARCA5	94	90.352	Myotis_lucifugus
ENSSFOG00015013252	SMARCA5	97	89.731	ENSNGAG00000000441	Smarca5	100	86.312	Nannospalax_galili
ENSSFOG00015013252	SMARCA5	97	90.050	ENSNLEG00000005383	SMARCA5	94	90.050	Nomascus_leucogenys
ENSSFOG00015013252	SMARCA5	94	84.623	ENSMEUG00000001267	SMARCA5	100	84.623	Notamacropus_eugenii
ENSSFOG00015013252	SMARCA5	86	96.335	ENSOPRG00000014427	SMARCA5	86	96.335	Ochotona_princeps
ENSSFOG00015013252	SMARCA5	94	91.649	ENSOANG00000013921	SMARCA5	100	91.649	Ornithorhynchus_anatinus
ENSSFOG00015013252	SMARCA5	94	91.443	ENSOCUG00000013042	SMARCA5	100	91.443	Oryctolagus_cuniculus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSOGAG00000009702	SMARCA5	94	90.352	Otolemur_garnettii
ENSSFOG00015013252	SMARCA5	96	90.141	ENSOARG00000010589	SMARCA5	98	86.840	Ovis_aries
ENSSFOG00015013252	SMARCA5	97	90.151	ENSPPAG00000028523	SMARCA5	99	90.679	Pan_paniscus
ENSSFOG00015013252	SMARCA5	97	85.427	ENSPPRG00000004925	SMARCA5	99	82.821	Panthera_pardus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSPTIG00000020959	SMARCA5	96	89.930	Panthera_tigris_altaica
ENSSFOG00015013252	SMARCA5	97	90.050	ENSPTRG00000016472	SMARCA5	99	90.578	Pan_troglodytes
ENSSFOG00015013252	SMARCA5	97	90.050	ENSPANG00000001175	SMARCA5	94	90.050	Papio_anubis
ENSSFOG00015013252	SMARCA5	95	92.806	ENSPKIG00000015699	SMARCA5	98	92.544	Paramormyrops_kingsleyae
ENSSFOG00015013252	SMARCA5	100	93.093	ENSPKIG00000015885	SMARCA5	100	95.459	Paramormyrops_kingsleyae
ENSSFOG00015013252	SMARCA5	97	88.844	ENSPSIG00000004177	SMARCA5	99	88.844	Pelodiscus_sinensis
ENSSFOG00015013252	SMARCA5	94	91.555	ENSPMGG00000012316	SMARCA5	100	91.555	Periophthalmus_magnuspinnatus
ENSSFOG00015013252	SMARCA5	97	88.484	ENSPEMG00000008060	Smarca5	97	90.679	Peromyscus_maniculatus_bairdii
ENSSFOG00015013252	SMARCA5	95	70.876	ENSPMAG00000006011	SMARCA5	84	85.552	Petromyzon_marinus
ENSSFOG00015013252	SMARCA5	63	83.617	ENSPMAG00000008026	SMARCA5	100	83.617	Petromyzon_marinus
ENSSFOG00015013252	SMARCA5	98	89.861	ENSPCIG00000003926	SMARCA5	94	90.983	Phascolarctos_cinereus
ENSSFOG00015013252	SMARCA5	97	90.050	ENSPPYG00000015091	SMARCA5	94	90.050	Pongo_abelii
ENSSFOG00015013252	SMARCA5	81	87.333	ENSPCAG00000014230	SMARCA5	83	87.333	Procavia_capensis
ENSSFOG00015013252	SMARCA5	97	87.827	ENSPCOG00000026744	SMARCA5	99	88.057	Propithecus_coquereli
ENSSFOG00015013252	SMARCA5	97	90.251	ENSPVAG00000006482	SMARCA5	95	90.251	Pteropus_vampyrus
ENSSFOG00015013252	SMARCA5	100	90.329	ENSPNAG00000027824	SMARCA5	100	90.329	Pygocentrus_nattereri
ENSSFOG00015013252	SMARCA5	97	90.050	ENSRNOG00000018149	Smarca5	99	90.050	Rattus_norvegicus
ENSSFOG00015013252	SMARCA5	96	90.578	ENSRBIG00000044644	SMARCA5	96	88.270	Rhinopithecus_bieti
ENSSFOG00015013252	SMARCA5	96	90.578	ENSRROG00000029591	SMARCA5	99	90.578	Rhinopithecus_roxellana
ENSSFOG00015013252	SMARCA5	97	90.151	ENSSBOG00000036257	SMARCA5	94	90.151	Saimiri_boliviensis_boliviensis
ENSSFOG00015013252	SMARCA5	96	90.983	ENSSHAG00000008464	SMARCA5	99	90.983	Sarcophilus_harrisii
ENSSFOG00015013252	SMARCA5	96	89.362	ENSSPUG00000007604	SMARCA5	99	89.362	Sphenodon_punctatus
ENSSFOG00015013252	SMARCA5	97	90.352	ENSSSCG00000009047	SMARCA5	94	90.352	Sus_scrofa
ENSSFOG00015013252	SMARCA5	95	91.906	ENSTGUG00000002408	SMARCA5	97	91.906	Taeniopygia_guttata
ENSSFOG00015013252	SMARCA5	96	90.071	ENSUAMG00000023495	SMARCA5	94	89.980	Ursus_americanus
ENSSFOG00015013252	SMARCA5	97	89.930	ENSUMAG00000015324	SMARCA5	97	89.930	Ursus_maritimus
ENSSFOG00015013252	SMARCA5	97	90.251	ENSVPAG00000008982	SMARCA5	94	90.251	Vicugna_pacos
ENSSFOG00015013252	SMARCA5	97	89.930	ENSVVUG00000017473	SMARCA5	95	89.930	Vulpes_vulpes
ENSSFOG00015013252	SMARCA5	94	87.551	ENSXETG00000017566	smarca5	97	87.551	Xenopus_tropicalis