EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015013391 (Gene tree)
Gene ID: 108920190
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7676 bases
Position: chrKV411284.1:278984-286659
Accession: 108920190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015020820	TruB_N	PF01509.18	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015021054	-	4788	XM_018728765	ENSSFOP00015020820	309 (aa)	XP_018584281	A0A1W4Y7N4

Gene Model

Click here to download ENSSFOG00015013391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015013391	trub2	89	57.914	ENSG00000167112	TRUB2	84	57.914	Homo_sapiens
ENSSFOG00015013391	trub2	66	69.118	ENSAPOG00000015733	trub2	74	69.118	Acanthochromis_polyacanthus
ENSSFOG00015013391	trub2	68	71.318	ENSAPOG00000018284	-	79	71.318	Acanthochromis_polyacanthus
ENSSFOG00015013391	trub2	89	56.835	ENSAMEG00000015395	TRUB2	84	56.835	Ailuropoda_melanoleuca
ENSSFOG00015013391	trub2	92	63.066	ENSACIG00000016500	trub2	89	62.116	Amphilophus_citrinellus
ENSSFOG00015013391	trub2	92	65.278	ENSAOCG00000002330	trub2	84	65.278	Amphiprion_ocellaris
ENSSFOG00015013391	trub2	92	65.278	ENSAPEG00000013177	trub2	84	65.278	Amphiprion_percula
ENSSFOG00015013391	trub2	94	62.838	ENSATEG00000011371	trub2	93	62.838	Anabas_testudineus
ENSSFOG00015013391	trub2	87	55.882	ENSAPLG00000009254	TRUB2	89	56.618	Anas_platyrhynchos
ENSSFOG00015013391	trub2	90	58.929	ENSACAG00000007331	TRUB2	85	58.929	Anolis_carolinensis
ENSSFOG00015013391	trub2	91	57.544	ENSANAG00000036234	TRUB2	91	57.544	Aotus_nancymaae
ENSSFOG00015013391	trub2	94	62.245	ENSACLG00000010793	trub2	89	62.245	Astatotilapia_calliptera
ENSSFOG00015013391	trub2	92	67.596	ENSAMXG00000031679	trub2	82	67.596	Astyanax_mexicanus
ENSSFOG00015013391	trub2	91	56.842	ENSCJAG00000020009	TRUB2	86	56.842	Callithrix_jacchus
ENSSFOG00015013391	trub2	89	56.115	ENSCAFG00000020068	TRUB2	84	56.115	Canis_familiaris
ENSSFOG00015013391	trub2	54	55.621	ENSCAFG00020017325	-	95	55.621	Canis_lupus_dingo
ENSSFOG00015013391	trub2	89	58.633	ENSCHIG00000021160	TRUB2	84	58.633	Capra_hircus
ENSSFOG00015013391	trub2	89	57.194	ENSTSYG00000034163	TRUB2	84	57.194	Carlito_syrichta
ENSSFOG00015013391	trub2	80	53.815	ENSCAPG00000000223	TRUB2	89	50.000	Cavia_aperea
ENSSFOG00015013391	trub2	93	54.483	ENSCPOG00000013535	TRUB2	91	51.934	Cavia_porcellus
ENSSFOG00015013391	trub2	89	54.317	ENSCCAG00000028463	-	84	54.317	Cebus_capucinus
ENSSFOG00015013391	trub2	94	55.593	ENSCCAG00000026531	-	90	55.593	Cebus_capucinus
ENSSFOG00015013391	trub2	89	58.633	ENSCATG00000038234	TRUB2	84	58.633	Cercocebus_atys
ENSSFOG00015013391	trub2	89	56.475	ENSCLAG00000001702	TRUB2	87	55.621	Chinchilla_lanigera
ENSSFOG00015013391	trub2	89	54.480	ENSCSAG00000014117	TRUB2	84	54.480	Chlorocebus_sabaeus
ENSSFOG00015013391	trub2	89	56.679	ENSCHOG00000001555	TRUB2	84	56.679	Choloepus_hoffmanni
ENSSFOG00015013391	trub2	89	59.712	ENSCPBG00000025186	TRUB2	82	59.712	Chrysemys_picta_bellii
ENSSFOG00015013391	trub2	84	36.090	ENSCSAVG00000003930	-	81	36.090	Ciona_savignyi
ENSSFOG00015013391	trub2	89	51.079	ENSCANG00000016135	TRUB2	83	51.079	Colobus_angolensis_palliatus
ENSSFOG00015013391	trub2	89	55.396	ENSCGRG00001024441	Trub2	91	52.663	Cricetulus_griseus_chok1gshd
ENSSFOG00015013391	trub2	89	55.396	ENSCGRG00000005633	Trub2	84	55.396	Cricetulus_griseus_crigri
ENSSFOG00015013391	trub2	92	64.685	ENSCSEG00000001331	trub2	86	64.685	Cynoglossus_semilaevis
ENSSFOG00015013391	trub2	92	63.763	ENSCVAG00000009901	trub2	86	63.763	Cyprinodon_variegatus
ENSSFOG00015013391	trub2	92	65.972	ENSDARG00000028379	trub2	82	65.972	Danio_rerio
ENSSFOG00015013391	trub2	86	37.358	ENSDNOG00000043967	-	82	37.358	Dasypus_novemcinctus
ENSSFOG00015013391	trub2	89	57.194	ENSDNOG00000045679	-	84	57.194	Dasypus_novemcinctus
ENSSFOG00015013391	trub2	91	56.491	ENSDORG00000016222	Trub2	88	56.835	Dipodomys_ordii
ENSSFOG00015013391	trub2	90	34.397	FBgn0033060	CG7849	89	34.397	Drosophila_melanogaster
ENSSFOG00015013391	trub2	89	57.194	ENSETEG00000009114	TRUB2	86	57.194	Echinops_telfairi
ENSSFOG00015013391	trub2	69	52.381	ENSEBUG00000015723	trub2	79	52.381	Eptatretus_burgeri
ENSSFOG00015013391	trub2	94	55.782	ENSEASG00005016819	TRUB2	89	55.782	Equus_asinus_asinus
ENSSFOG00015013391	trub2	94	55.442	ENSECAG00000023520	TRUB2	89	55.442	Equus_caballus
ENSSFOG00015013391	trub2	89	56.115	ENSEEUG00000008908	TRUB2	84	56.115	Erinaceus_europaeus
ENSSFOG00015013391	trub2	92	66.333	ENSELUG00000002376	trub2	94	66.333	Esox_lucius
ENSSFOG00015013391	trub2	89	56.475	ENSFCAG00000005839	TRUB2	87	56.475	Felis_catus
ENSSFOG00015013391	trub2	80	59.677	ENSFALG00000001364	TRUB2	80	59.677	Ficedula_albicollis
ENSSFOG00015013391	trub2	89	56.115	ENSFDAG00000021374	TRUB2	96	51.323	Fukomys_damarensis
ENSSFOG00015013391	trub2	96	58.553	ENSFHEG00000014655	trub2	90	58.553	Fundulus_heteroclitus
ENSSFOG00015013391	trub2	92	55.282	ENSGMOG00000000981	trub2	96	55.282	Gadus_morhua
ENSSFOG00015013391	trub2	88	58.303	ENSGALG00000004920	TRUB2	67	58.303	Gallus_gallus
ENSSFOG00015013391	trub2	92	64.111	ENSGAFG00000010107	trub2	86	63.889	Gambusia_affinis
ENSSFOG00015013391	trub2	92	65.505	ENSGACG00000001476	trub2	86	65.505	Gasterosteus_aculeatus
ENSSFOG00015013391	trub2	92	59.722	ENSGAGG00000022872	TRUB2	85	59.722	Gopherus_agassizii
ENSSFOG00015013391	trub2	89	57.194	ENSGGOG00000014780	TRUB2	84	57.194	Gorilla_gorilla
ENSSFOG00015013391	trub2	94	62.925	ENSHBUG00000022384	trub2	89	62.925	Haplochromis_burtoni
ENSSFOG00015013391	trub2	88	56.159	ENSHGLG00000016715	TRUB2	83	56.159	Heterocephalus_glaber_female
ENSSFOG00015013391	trub2	88	56.159	ENSHGLG00100016548	TRUB2	83	56.159	Heterocephalus_glaber_male
ENSSFOG00015013391	trub2	92	67.719	ENSHCOG00000017748	trub2	88	67.719	Hippocampus_comes
ENSSFOG00015013391	trub2	92	66.899	ENSIPUG00000017725	hdhd3	50	66.899	Ictalurus_punctatus
ENSSFOG00015013391	trub2	89	56.679	ENSSTOG00000008024	-	87	54.762	Ictidomys_tridecemlineatus
ENSSFOG00015013391	trub2	89	56.318	ENSSTOG00000022617	-	85	56.318	Ictidomys_tridecemlineatus
ENSSFOG00015013391	trub2	88	51.087	ENSJJAG00000019181	Trub2	82	51.087	Jaculus_jaculus
ENSSFOG00015013391	trub2	92	62.847	ENSKMAG00000007861	trub2	86	62.847	Kryptolebias_marmoratus
ENSSFOG00015013391	trub2	92	65.625	ENSLBEG00000000907	trub2	85	65.625	Labrus_bergylta
ENSSFOG00015013391	trub2	91	59.717	ENSLACG00000001515	TRUB2	83	59.717	Latimeria_chalumnae
ENSSFOG00015013391	trub2	92	70.035	ENSLOCG00000000885	trub2	95	70.035	Lepisosteus_oculatus
ENSSFOG00015013391	trub2	89	56.835	ENSLAFG00000002174	TRUB2	92	56.835	Loxodonta_africana
ENSSFOG00015013391	trub2	89	58.273	ENSMFAG00000000881	TRUB2	84	58.273	Macaca_fascicularis
ENSSFOG00015013391	trub2	89	58.273	ENSMMUG00000014146	TRUB2	84	58.273	Macaca_mulatta
ENSSFOG00015013391	trub2	89	58.273	ENSMNEG00000011189	TRUB2	84	58.273	Macaca_nemestrina
ENSSFOG00015013391	trub2	89	58.633	ENSMLEG00000037270	TRUB2	84	58.633	Mandrillus_leucophaeus
ENSSFOG00015013391	trub2	92	63.889	ENSMAMG00000023643	trub2	95	63.889	Mastacembelus_armatus
ENSSFOG00015013391	trub2	94	62.585	ENSMZEG00005016018	trub2	89	62.585	Maylandia_zebra
ENSSFOG00015013391	trub2	59	60.109	ENSMGAG00000003894	TRUB2	92	60.109	Meleagris_gallopavo
ENSSFOG00015013391	trub2	89	55.755	ENSMAUG00000010403	Trub2	95	51.087	Mesocricetus_auratus
ENSSFOG00015013391	trub2	91	57.193	ENSMICG00000047032	TRUB2	86	57.193	Microcebus_murinus
ENSSFOG00015013391	trub2	89	55.396	ENSMOCG00000014291	Trub2	92	55.396	Microtus_ochrogaster
ENSSFOG00015013391	trub2	92	64.236	ENSMMOG00000021674	trub2	88	64.236	Mola_mola
ENSSFOG00015013391	trub2	88	56.159	ENSMODG00000005940	TRUB2	93	56.159	Monodelphis_domestica
ENSSFOG00015013391	trub2	97	63.023	ENSMALG00000021231	trub2	92	63.023	Monopterus_albus
ENSSFOG00015013391	trub2	89	55.755	MGP_CAROLIEiJ_G0023368	Trub2	87	53.254	Mus_caroli
ENSSFOG00015013391	trub2	89	56.115	ENSMUSG00000039826	Trub2	87	53.846	Mus_musculus
ENSSFOG00015013391	trub2	89	55.755	MGP_PahariEiJ_G0024826	Trub2	87	53.254	Mus_pahari
ENSSFOG00015013391	trub2	89	55.755	MGP_SPRETEiJ_G0024286	Trub2	95	51.087	Mus_spretus
ENSSFOG00015013391	trub2	89	55.396	ENSMPUG00000013206	TRUB2	76	55.396	Mustela_putorius_furo
ENSSFOG00015013391	trub2	89	58.993	ENSMLUG00000005256	TRUB2	84	58.993	Myotis_lucifugus
ENSSFOG00015013391	trub2	89	55.755	ENSNGAG00000018679	Trub2	84	55.755	Nannospalax_galili
ENSSFOG00015013391	trub2	94	63.946	ENSNBRG00000016294	trub2	89	63.946	Neolamprologus_brichardi
ENSSFOG00015013391	trub2	89	58.273	ENSNLEG00000017556	TRUB2	84	58.273	Nomascus_leucogenys
ENSSFOG00015013391	trub2	88	57.609	ENSMEUG00000000484	TRUB2	89	57.609	Notamacropus_eugenii
ENSSFOG00015013391	trub2	89	54.317	ENSOPRG00000001981	TRUB2	84	54.317	Ochotona_princeps
ENSSFOG00015013391	trub2	89	56.115	ENSODEG00000017292	TRUB2	86	56.115	Octodon_degus
ENSSFOG00015013391	trub2	94	61.775	ENSONIG00000004230	trub2	89	61.775	Oreochromis_niloticus
ENSSFOG00015013391	trub2	60	54.011	ENSOANG00000029023	-	83	54.011	Ornithorhynchus_anatinus
ENSSFOG00015013391	trub2	89	57.914	ENSOCUG00000026296	TRUB2	76	57.914	Oryctolagus_cuniculus
ENSSFOG00015013391	trub2	89	62.950	ENSORLG00000020011	trub2	84	62.950	Oryzias_latipes
ENSSFOG00015013391	trub2	89	63.177	ENSORLG00020011028	trub2	81	63.177	Oryzias_latipes_hni
ENSSFOG00015013391	trub2	89	63.406	ENSORLG00015007494	trub2	85	63.177	Oryzias_latipes_hsok
ENSSFOG00015013391	trub2	92	63.066	ENSOMEG00000006702	trub2	87	63.066	Oryzias_melastigma
ENSSFOG00015013391	trub2	89	60.072	ENSOARG00000010579	-	84	60.072	Ovis_aries
ENSSFOG00015013391	trub2	65	61.000	ENSOARG00000003785	-	82	59.420	Ovis_aries
ENSSFOG00015013391	trub2	89	57.914	ENSPPAG00000043146	TRUB2	84	57.914	Pan_paniscus
ENSSFOG00015013391	trub2	89	56.475	ENSPPRG00000006307	TRUB2	87	56.475	Panthera_pardus
ENSSFOG00015013391	trub2	89	56.835	ENSPTIG00000012366	TRUB2	87	56.835	Panthera_tigris_altaica
ENSSFOG00015013391	trub2	89	57.554	ENSPTRG00000052151	-	84	57.554	Pan_troglodytes
ENSSFOG00015013391	trub2	89	57.554	ENSPTRG00000021423	TRUB2	84	57.554	Pan_troglodytes
ENSSFOG00015013391	trub2	89	58.273	ENSPANG00000025856	TRUB2	84	58.273	Papio_anubis
ENSSFOG00015013391	trub2	92	75.261	ENSPKIG00000019769	trub2	94	75.261	Paramormyrops_kingsleyae
ENSSFOG00015013391	trub2	90	54.064	ENSPSIG00000015701	TRUB2	94	54.064	Pelodiscus_sinensis
ENSSFOG00015013391	trub2	92	61.856	ENSPMGG00000010206	trub2	91	61.856	Periophthalmus_magnuspinnatus
ENSSFOG00015013391	trub2	89	55.556	ENSPEMG00000017893	Trub2	91	53.529	Peromyscus_maniculatus_bairdii
ENSSFOG00015013391	trub2	89	57.401	ENSPCIG00000026731	TRUB2	89	57.401	Phascolarctos_cinereus
ENSSFOG00015013391	trub2	88	64.982	ENSPFOG00000018018	trub2	73	64.982	Poecilia_formosa
ENSSFOG00015013391	trub2	88	64.982	ENSPLAG00000010484	trub2	79	64.982	Poecilia_latipinna
ENSSFOG00015013391	trub2	92	63.542	ENSPMEG00000012913	trub2	85	63.542	Poecilia_mexicana
ENSSFOG00015013391	trub2	92	63.542	ENSPREG00000002549	trub2	85	63.542	Poecilia_reticulata
ENSSFOG00015013391	trub2	89	56.115	ENSPPYG00000019650	TRUB2	85	56.115	Pongo_abelii
ENSSFOG00015013391	trub2	89	57.194	ENSPCAG00000015068	TRUB2	85	57.194	Procavia_capensis
ENSSFOG00015013391	trub2	91	57.544	ENSPCOG00000017100	TRUB2	86	57.544	Propithecus_coquereli
ENSSFOG00015013391	trub2	83	57.471	ENSPVAG00000001224	TRUB2	88	57.471	Pteropus_vampyrus
ENSSFOG00015013391	trub2	94	62.585	ENSPNYG00000013666	trub2	89	62.585	Pundamilia_nyererei
ENSSFOG00015013391	trub2	92	70.035	ENSPNAG00000017292	trub2	82	70.035	Pygocentrus_nattereri
ENSSFOG00015013391	trub2	89	55.755	ENSRNOG00000043189	Trub2	86	55.755	Rattus_norvegicus
ENSSFOG00015013391	trub2	89	51.439	ENSRBIG00000006965	TRUB2	83	51.439	Rhinopithecus_bieti
ENSSFOG00015013391	trub2	89	57.194	ENSRROG00000042928	TRUB2	84	57.194	Rhinopithecus_roxellana
ENSSFOG00015013391	trub2	92	55.556	ENSSBOG00000022439	TRUB2	87	55.556	Saimiri_boliviensis_boliviensis
ENSSFOG00015013391	trub2	92	64.236	ENSSMAG00000020820	trub2	88	64.236	Scophthalmus_maximus
ENSSFOG00015013391	trub2	92	64.706	ENSSDUG00000016928	trub2	86	64.706	Seriola_dumerili
ENSSFOG00015013391	trub2	92	64.583	ENSSLDG00000024701	trub2	86	64.583	Seriola_lalandi_dorsalis
ENSSFOG00015013391	trub2	91	56.842	ENSSPUG00000015515	TRUB2	85	56.842	Sphenodon_punctatus
ENSSFOG00015013391	trub2	92	67.361	ENSSPAG00000017865	trub2	87	67.361	Stegastes_partitus
ENSSFOG00015013391	trub2	92	57.986	ENSSSCG00000005645	TRUB2	84	57.600	Sus_scrofa
ENSSFOG00015013391	trub2	81	59.449	ENSTGUG00000003704	TRUB2	97	59.449	Taeniopygia_guttata
ENSSFOG00015013391	trub2	92	61.806	ENSTRUG00000015499	trub2	88	61.806	Takifugu_rubripes
ENSSFOG00015013391	trub2	92	63.889	ENSTNIG00000014721	trub2	98	63.889	Tetraodon_nigroviridis
ENSSFOG00015013391	trub2	58	55.556	ENSTBEG00000000586	TRUB2	80	55.556	Tupaia_belangeri
ENSSFOG00015013391	trub2	89	56.475	ENSTTRG00000016486	TRUB2	84	56.475	Tursiops_truncatus
ENSSFOG00015013391	trub2	89	56.475	ENSUAMG00000020276	TRUB2	82	56.475	Ursus_americanus
ENSSFOG00015013391	trub2	89	56.115	ENSUMAG00000022051	TRUB2	82	56.115	Ursus_maritimus
ENSSFOG00015013391	trub2	96	41.333	ENSVPAG00000005793	TRUB2	95	41.333	Vicugna_pacos
ENSSFOG00015013391	trub2	89	56.115	ENSVVUG00000013451	TRUB2	79	56.115	Vulpes_vulpes
ENSSFOG00015013391	trub2	92	60.140	ENSXETG00000003973	trub2	88	60.140	Xenopus_tropicalis
ENSSFOG00015013391	trub2	92	63.194	ENSXCOG00000008759	trub2	86	63.194	Xiphophorus_couchianus
ENSSFOG00015013391	trub2	92	63.194	ENSXMAG00000015478	trub2	86	63.194	Xiphophorus_maculatus