EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015013507 (Gene tree)
Gene ID: 108934670
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10284 bases
Position: chrKV410795.1:885734-896017
Accession: 108934670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021040	R3H	PF01424.22	2e-13	1	1
ENSSFOP00015020989	R3H	PF01424.22	6.2e-12	1	1
ENSSFOP00015021001	R3H	PF01424.22	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015021223	-	5700	XM_018752682	ENSSFOP00015020989	375 (aa)	XP_018608198	A0A1W5A5I2
ENSSFOT00015021235	-	1434	XM_018752719	ENSSFOP00015021001	375 (aa)	XP_018608235	A0A1W5A5I2
ENSSFOT00015021275	-	1002	-	ENSSFOP00015021040	333 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015013507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015013507	r3hcc1	98	34.278	ENSG00000104679	R3HCC1	96	32.300	Homo_sapiens
ENSSFOG00015013507	r3hcc1	100	44.975	ENSAPOG00000003616	r3hcc1	88	46.482	Acanthochromis_polyacanthus
ENSSFOG00015013507	r3hcc1	98	35.678	ENSAMEG00000002963	R3HCC1	83	36.432	Ailuropoda_melanoleuca
ENSSFOG00015013507	r3hcc1	82	64.368	ENSACIG00000017144	r3hcc1	100	38.525	Amphilophus_citrinellus
ENSSFOG00015013507	r3hcc1	100	45.844	ENSAOCG00000003945	r3hcc1	87	62.162	Amphiprion_ocellaris
ENSSFOG00015013507	r3hcc1	100	46.482	ENSAPEG00000003613	r3hcc1	85	62.162	Amphiprion_percula
ENSSFOG00015013507	r3hcc1	76	56.757	ENSATEG00000023860	r3hcc1	99	49.871	Anabas_testudineus
ENSSFOG00015013507	r3hcc1	91	49.398	ENSACAG00000016627	R3HCC1	91	37.530	Anolis_carolinensis
ENSSFOG00015013507	r3hcc1	98	34.872	ENSANAG00000036169	R3HCC1	96	33.077	Aotus_nancymaae
ENSSFOG00015013507	r3hcc1	98	39.756	ENSBTAG00000025830	R3HCC1	87	40.000	Bos_taurus
ENSSFOG00015013507	r3hcc1	98	34.872	ENSCJAG00000020118	R3HCC1	96	32.051	Callithrix_jacchus
ENSSFOG00015013507	r3hcc1	97	37.845	ENSCAFG00000009210	R3HCC1	86	37.437	Canis_familiaris
ENSSFOG00015013507	r3hcc1	87	46.067	ENSCAFG00020012870	R3HCC1	80	34.593	Canis_lupus_dingo
ENSSFOG00015013507	r3hcc1	98	35.904	ENSCHIG00000009107	R3HCC1	96	31.395	Capra_hircus
ENSSFOG00015013507	r3hcc1	98	34.336	ENSTSYG00000000511	R3HCC1	70	35.539	Carlito_syrichta
ENSSFOG00015013507	r3hcc1	79	58.333	ENSCAPG00000015813	R3HCC1	71	58.333	Cavia_aperea
ENSSFOG00015013507	r3hcc1	92	48.889	ENSCPOG00000009696	R3HCC1	92	34.253	Cavia_porcellus
ENSSFOG00015013507	r3hcc1	63	47.191	ENSCCAG00000037811	R3HCC1	96	31.250	Cebus_capucinus
ENSSFOG00015013507	r3hcc1	97	31.443	ENSCATG00000032971	R3HCC1	96	34.301	Cercocebus_atys
ENSSFOG00015013507	r3hcc1	98	35.949	ENSCLAG00000015556	R3HCC1	76	37.129	Chinchilla_lanigera
ENSSFOG00015013507	r3hcc1	63	46.067	ENSCSAG00000016250	R3HCC1	83	35.049	Chlorocebus_sabaeus
ENSSFOG00015013507	r3hcc1	98	34.559	ENSCHOG00000000396	R3HCC1	93	30.645	Choloepus_hoffmanni
ENSSFOG00015013507	r3hcc1	98	34.974	ENSCANG00000029441	R3HCC1	96	32.190	Colobus_angolensis_palliatus
ENSSFOG00015013507	r3hcc1	100	47.859	ENSCSEG00000005748	r3hcc1	95	47.859	Cynoglossus_semilaevis
ENSSFOG00015013507	r3hcc1	84	40.580	ENSCVAG00000002640	r3hcc1	91	40.580	Cyprinodon_variegatus
ENSSFOG00015013507	r3hcc1	98	46.579	ENSDARG00000099593	r3hcc1	99	40.102	Danio_rerio
ENSSFOG00015013507	r3hcc1	98	35.644	ENSDNOG00000007168	R3HCC1	83	36.139	Dasypus_novemcinctus
ENSSFOG00015013507	r3hcc1	86	45.977	ENSDORG00000026365	R3hcc1	92	34.783	Dipodomys_ordii
ENSSFOG00015013507	r3hcc1	98	33.985	ENSETEG00000001147	R3HCC1	88	34.398	Echinops_telfairi
ENSSFOG00015013507	r3hcc1	98	36.207	ENSEASG00005018782	R3HCC1	73	36.453	Equus_asinus_asinus
ENSSFOG00015013507	r3hcc1	98	36.105	ENSECAG00000025013	R3HCC1	89	37.192	Equus_caballus
ENSSFOG00015013507	r3hcc1	98	34.988	ENSEEUG00000011918	R3HCC1	88	34.217	Erinaceus_europaeus
ENSSFOG00015013507	r3hcc1	99	51.574	ENSELUG00000023650	r3hcc1	99	50.732	Esox_lucius
ENSSFOG00015013507	r3hcc1	98	37.203	ENSFCAG00000012395	R3HCC1	88	36.272	Felis_catus
ENSSFOG00015013507	r3hcc1	69	48.592	ENSFDAG00000001572	R3HCC1	91	34.752	Fukomys_damarensis
ENSSFOG00015013507	r3hcc1	93	37.143	ENSGMOG00000017590	-	98	34.435	Gadus_morhua
ENSSFOG00015013507	r3hcc1	100	45.340	ENSGAFG00000008747	-	93	46.373	Gambusia_affinis
ENSSFOG00015013507	r3hcc1	96	47.532	ENSGACG00000008447	r3hcc1	88	47.532	Gasterosteus_aculeatus
ENSSFOG00015013507	r3hcc1	98	33.661	ENSGGOG00000013817	R3HCC1	96	33.419	Gorilla_gorilla
ENSSFOG00015013507	r3hcc1	100	42.382	ENSHBUG00000022250	-	86	62.712	Haplochromis_burtoni
ENSSFOG00015013507	r3hcc1	98	37.624	ENSHGLG00000010517	R3HCC1	84	38.084	Heterocephalus_glaber_female
ENSSFOG00015013507	r3hcc1	98	37.624	ENSHGLG00100006388	R3HCC1	84	38.084	Heterocephalus_glaber_male
ENSSFOG00015013507	r3hcc1	96	46.736	ENSHCOG00000011745	r3hcc1	94	42.857	Hippocampus_comes
ENSSFOG00015013507	r3hcc1	97	52.861	ENSIPUG00000024504	r3hcc1	80	52.507	Ictalurus_punctatus
ENSSFOG00015013507	r3hcc1	71	51.316	ENSSTOG00000027130	R3HCC1	58	51.316	Ictidomys_tridecemlineatus
ENSSFOG00015013507	r3hcc1	71	48.366	ENSJJAG00000013075	R3hcc1	91	35.529	Jaculus_jaculus
ENSSFOG00015013507	r3hcc1	100	48.866	ENSKMAG00000000286	r3hcc1	99	48.866	Kryptolebias_marmoratus
ENSSFOG00015013507	r3hcc1	99	38.200	ENSLACG00000011894	R3HCC1	92	37.713	Latimeria_chalumnae
ENSSFOG00015013507	r3hcc1	99	50.868	ENSLOCG00000015442	r3hcc1	96	49.740	Lepisosteus_oculatus
ENSSFOG00015013507	r3hcc1	98	34.014	ENSLAFG00000016137	R3HCC1	88	34.091	Loxodonta_africana
ENSSFOG00015013507	r3hcc1	65	46.067	ENSMFAG00000032894	R3HCC1	96	34.037	Macaca_fascicularis
ENSSFOG00015013507	r3hcc1	65	46.067	ENSMMUG00000016655	R3HCC1	96	31.500	Macaca_mulatta
ENSSFOG00015013507	r3hcc1	98	35.459	ENSMNEG00000043283	R3HCC1	96	32.982	Macaca_nemestrina
ENSSFOG00015013507	r3hcc1	82	40.690	ENSMLEG00000030147	R3HCC1	96	33.077	Mandrillus_leucophaeus
ENSSFOG00015013507	r3hcc1	100	48.030	ENSMAMG00000018146	r3hcc1	99	49.015	Mastacembelus_armatus
ENSSFOG00015013507	r3hcc1	99	39.430	ENSMGAG00000001356	R3HCC1	86	40.338	Meleagris_gallopavo
ENSSFOG00015013507	r3hcc1	68	50.355	ENSMAUG00000016096	R3hcc1	50	53.333	Mesocricetus_auratus
ENSSFOG00015013507	r3hcc1	98	36.500	ENSMICG00000011146	R3HCC1	96	32.737	Microcebus_murinus
ENSSFOG00015013507	r3hcc1	70	50.000	ENSMOCG00000018508	R3hcc1	52	46.667	Microtus_ochrogaster
ENSSFOG00015013507	r3hcc1	86	36.011	ENSMODG00000016809	-	66	38.276	Monodelphis_domestica
ENSSFOG00015013507	r3hcc1	100	45.813	ENSMALG00000000731	r3hcc1	99	45.297	Monopterus_albus
ENSSFOG00015013507	r3hcc1	70	46.980	ENSMUSG00000034194	R3hcc1	56	47.436	Mus_musculus
ENSSFOG00015013507	r3hcc1	72	46.104	MGP_PahariEiJ_G0030484	R3hcc1	55	46.104	Mus_pahari
ENSSFOG00015013507	r3hcc1	70	46.980	MGP_SPRETEiJ_G0020359	R3hcc1	56	47.436	Mus_spretus
ENSSFOG00015013507	r3hcc1	98	36.935	ENSMPUG00000003457	R3HCC1	79	37.186	Mustela_putorius_furo
ENSSFOG00015013507	r3hcc1	98	34.411	ENSMLUG00000000266	R3HCC1	84	37.037	Myotis_lucifugus
ENSSFOG00015013507	r3hcc1	69	51.408	ENSNGAG00000016747	R3hcc1	91	34.259	Nannospalax_galili
ENSSFOG00015013507	r3hcc1	81	88.889	ENSNBRG00000016975	-	75	88.889	Neolamprologus_brichardi
ENSSFOG00015013507	r3hcc1	90	32.468	ENSNLEG00000015944	R3HCC1	80	32.474	Nomascus_leucogenys
ENSSFOG00015013507	r3hcc1	98	35.369	ENSMEUG00000010587	R3HCC1	90	36.802	Notamacropus_eugenii
ENSSFOG00015013507	r3hcc1	97	37.343	ENSOPRG00000013390	R3HCC1	86	37.845	Ochotona_princeps
ENSSFOG00015013507	r3hcc1	71	50.993	ENSODEG00000007529	R3HCC1	64	47.090	Octodon_degus
ENSSFOG00015013507	r3hcc1	98	38.035	ENSOANG00000013877	R3HCC1	89	37.531	Ornithorhynchus_anatinus
ENSSFOG00015013507	r3hcc1	97	36.203	ENSOCUG00000023554	R3HCC1	77	36.735	Oryctolagus_cuniculus
ENSSFOG00015013507	r3hcc1	100	44.724	ENSORLG00000016816	r3hcc1	99	45.455	Oryzias_latipes
ENSSFOG00015013507	r3hcc1	100	43.939	ENSORLG00020012005	r3hcc1	99	44.444	Oryzias_latipes_hni
ENSSFOG00015013507	r3hcc1	100	43.939	ENSORLG00015007018	r3hcc1	99	45.113	Oryzias_latipes_hsok
ENSSFOG00015013507	r3hcc1	97	43.333	ENSOMEG00000000816	r3hcc1	97	43.478	Oryzias_melastigma
ENSSFOG00015013507	r3hcc1	98	35.167	ENSOGAG00000001291	R3HCC1	84	35.024	Otolemur_garnettii
ENSSFOG00015013507	r3hcc1	98	36.740	ENSOARG00000010146	R3HCC1	88	37.805	Ovis_aries
ENSSFOG00015013507	r3hcc1	98	33.090	ENSPPAG00000033165	R3HCC1	96	31.486	Pan_paniscus
ENSSFOG00015013507	r3hcc1	98	36.020	ENSPPRG00000002522	R3HCC1	97	33.419	Panthera_pardus
ENSSFOG00015013507	r3hcc1	94	36.364	ENSPTIG00000011230	R3HCC1	92	36.623	Panthera_tigris_altaica
ENSSFOG00015013507	r3hcc1	98	32.847	ENSPTRG00000020076	R3HCC1	96	31.486	Pan_troglodytes
ENSSFOG00015013507	r3hcc1	82	40.690	ENSPANG00000000453	R3HCC1	96	34.301	Papio_anubis
ENSSFOG00015013507	r3hcc1	97	59.259	ENSPKIG00000020397	-	96	59.259	Paramormyrops_kingsleyae
ENSSFOG00015013507	r3hcc1	97	58.583	ENSPKIG00000014426	-	96	58.583	Paramormyrops_kingsleyae
ENSSFOG00015013507	r3hcc1	98	40.146	ENSPSIG00000017664	R3HCC1	90	39.130	Pelodiscus_sinensis
ENSSFOG00015013507	r3hcc1	65	53.261	ENSPMGG00000007792	r3hcc1	56	53.261	Periophthalmus_magnuspinnatus
ENSSFOG00015013507	r3hcc1	53	61.702	ENSPCIG00000022718	-	82	35.500	Phascolarctos_cinereus
ENSSFOG00015013507	r3hcc1	100	44.949	ENSPFOG00000022301	r3hcc1	86	44.444	Poecilia_formosa
ENSSFOG00015013507	r3hcc1	100	44.444	ENSPLAG00000010794	r3hcc1	76	56.044	Poecilia_latipinna
ENSSFOG00015013507	r3hcc1	100	44.949	ENSPMEG00000022515	r3hcc1	86	44.444	Poecilia_mexicana
ENSSFOG00015013507	r3hcc1	100	44.836	ENSPREG00000000713	r3hcc1	76	56.044	Poecilia_reticulata
ENSSFOG00015013507	r3hcc1	94	34.085	ENSPPYG00000018436	R3HCC1	96	34.328	Pongo_abelii
ENSSFOG00015013507	r3hcc1	68	49.645	ENSPCAG00000012229	R3HCC1	57	49.645	Procavia_capensis
ENSSFOG00015013507	r3hcc1	98	35.544	ENSPCOG00000027554	R3HCC1	90	36.364	Propithecus_coquereli
ENSSFOG00015013507	r3hcc1	98	37.093	ENSPVAG00000009829	R3HCC1	87	37.624	Pteropus_vampyrus
ENSSFOG00015013507	r3hcc1	95	51.639	ENSPNAG00000023875	r3hcc1	93	53.151	Pygocentrus_nattereri
ENSSFOG00015013507	r3hcc1	98	33.172	ENSRBIG00000028045	R3HCC1	96	32.558	Rhinopithecus_bieti
ENSSFOG00015013507	r3hcc1	98	33.172	ENSRROG00000031126	R3HCC1	96	32.558	Rhinopithecus_roxellana
ENSSFOG00015013507	r3hcc1	98	34.949	ENSSBOG00000022590	R3HCC1	96	33.333	Saimiri_boliviensis_boliviensis
ENSSFOG00015013507	r3hcc1	75	42.069	ENSSHAG00000016526	-	64	42.069	Sarcophilus_harrisii
ENSSFOG00015013507	r3hcc1	100	47.654	ENSSMAG00000008647	r3hcc1	99	47.654	Scophthalmus_maximus
ENSSFOG00015013507	r3hcc1	100	47.666	ENSSDUG00000022786	r3hcc1	93	49.140	Seriola_dumerili
ENSSFOG00015013507	r3hcc1	100	47.654	ENSSLDG00000019031	r3hcc1	93	48.642	Seriola_lalandi_dorsalis
ENSSFOG00015013507	r3hcc1	100	45.137	ENSSPAG00000013497	r3hcc1	96	45.137	Stegastes_partitus
ENSSFOG00015013507	r3hcc1	98	34.577	ENSSSCG00000037347	-	87	32.353	Sus_scrofa
ENSSFOG00015013507	r3hcc1	98	37.469	ENSSSCG00000039915	-	89	39.086	Sus_scrofa
ENSSFOG00015013507	r3hcc1	99	43.684	ENSTRUG00000015880	r3hcc1	99	37.469	Takifugu_rubripes
ENSSFOG00015013507	r3hcc1	97	34.739	ENSTTRG00000012247	R3HCC1	87	35.323	Tursiops_truncatus
ENSSFOG00015013507	r3hcc1	98	36.181	ENSUAMG00000007344	R3HCC1	90	36.935	Ursus_americanus
ENSSFOG00015013507	r3hcc1	98	37.905	ENSVVUG00000005056	R3HCC1	87	37.621	Vulpes_vulpes
ENSSFOG00015013507	r3hcc1	98	43.117	ENSXCOG00000017626	r3hcc1	86	44.444	Xiphophorus_couchianus
ENSSFOG00015013507	r3hcc1	100	44.192	ENSXMAG00000018375	r3hcc1	75	65.455	Xiphophorus_maculatus