EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015013572 (Gene tree)
Gene ID: 108935226
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5812 bases
Position: chrKV411097.1:6047960-6053771
Accession: 108935226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021079	PRP38	PF03371.15	6.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015021314	-	4593	XM_018753659	ENSSFOP00015021079	309 (aa)	XP_018609175	A0A1W5A877

Gene Model

Click here to download ENSSFOG00015013572's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015013572	prpf38a	100	79.553	ENSG00000134748	PRPF38A	100	78.914	Homo_sapiens
ENSSFOG00015013572	prpf38a	95	91.186	ENSAPOG00000011652	prpf38a	100	92.581	Acanthochromis_polyacanthus
ENSSFOG00015013572	prpf38a	100	79.553	ENSAMEG00000009319	PRPF38A	100	78.914	Ailuropoda_melanoleuca
ENSSFOG00015013572	prpf38a	72	90.541	ENSACIG00000012292	prpf38a	100	85.761	Amphilophus_citrinellus
ENSSFOG00015013572	prpf38a	95	91.186	ENSAOCG00000018004	prpf38a	100	92.581	Amphiprion_ocellaris
ENSSFOG00015013572	prpf38a	95	91.186	ENSAPEG00000021414	prpf38a	100	92.581	Amphiprion_percula
ENSSFOG00015013572	prpf38a	72	88.288	ENSATEG00000004608	prpf38a	100	92.581	Anabas_testudineus
ENSSFOG00015013572	prpf38a	79	75.000	ENSAPLG00000005827	PRPF38A	99	74.597	Anas_platyrhynchos
ENSSFOG00015013572	prpf38a	100	79.233	ENSACAG00000008249	PRPF38A	100	81.150	Anolis_carolinensis
ENSSFOG00015013572	prpf38a	100	58.413	ENSANAG00000029204	-	100	55.272	Aotus_nancymaae
ENSSFOG00015013572	prpf38a	100	79.553	ENSANAG00000027839	PRPF38A	100	78.914	Aotus_nancymaae
ENSSFOG00015013572	prpf38a	72	89.189	ENSACLG00000021595	prpf38a	100	92.581	Astatotilapia_calliptera
ENSSFOG00015013572	prpf38a	100	82.166	ENSAMXG00000029274	prpf38a	100	85.350	Astyanax_mexicanus
ENSSFOG00015013572	prpf38a	100	79.553	ENSBTAG00000002720	PRPF38A	100	78.914	Bos_taurus
ENSSFOG00015013572	prpf38a	63	64.615	WBGene00008380	prp-38	59	65.957	Caenorhabditis_elegans
ENSSFOG00015013572	prpf38a	100	79.553	ENSCJAG00000021594	PRPF38A	100	78.914	Callithrix_jacchus
ENSSFOG00015013572	prpf38a	100	79.553	ENSCAFG00000003740	PRPF38A	100	78.914	Canis_familiaris
ENSSFOG00015013572	prpf38a	100	79.553	ENSCAFG00020010939	PRPF38A	100	78.914	Canis_lupus_dingo
ENSSFOG00015013572	prpf38a	100	79.553	ENSCHIG00000024730	PRPF38A	100	78.914	Capra_hircus
ENSSFOG00015013572	prpf38a	86	75.185	ENSTSYG00000031994	-	95	74.444	Carlito_syrichta
ENSSFOG00015013572	prpf38a	100	79.553	ENSTSYG00000009868	-	100	78.914	Carlito_syrichta
ENSSFOG00015013572	prpf38a	100	81.350	ENSCPOG00000005079	PRPF38A	100	82.958	Cavia_porcellus
ENSSFOG00015013572	prpf38a	100	77.244	ENSCCAG00000026502	PRPF38A	100	77.955	Cebus_capucinus
ENSSFOG00015013572	prpf38a	100	54.019	ENSCATG00000044190	-	57	55.319	Cercocebus_atys
ENSSFOG00015013572	prpf38a	100	79.553	ENSCATG00000032296	PRPF38A	100	78.914	Cercocebus_atys
ENSSFOG00015013572	prpf38a	100	79.553	ENSCLAG00000005816	PRPF38A	100	78.914	Chinchilla_lanigera
ENSSFOG00015013572	prpf38a	100	80.192	ENSCPBG00000014791	PRPF38A	100	79.553	Chrysemys_picta_bellii
ENSSFOG00015013572	prpf38a	75	69.828	ENSCSAVG00000009580	-	71	72.018	Ciona_savignyi
ENSSFOG00015013572	prpf38a	75	84.483	ENSCANG00000032608	PRPF38A	74	86.036	Colobus_angolensis_palliatus
ENSSFOG00015013572	prpf38a	85	69.466	ENSCGRG00001002557	-	74	73.423	Cricetulus_griseus_chok1gshd
ENSSFOG00015013572	prpf38a	100	79.553	ENSCGRG00001018502	-	100	78.914	Cricetulus_griseus_chok1gshd
ENSSFOG00015013572	prpf38a	100	79.553	ENSCGRG00000014868	Prpf38a	100	78.914	Cricetulus_griseus_crigri
ENSSFOG00015013572	prpf38a	72	86.937	ENSCSEG00000001269	prpf38a	76	89.640	Cynoglossus_semilaevis
ENSSFOG00015013572	prpf38a	72	89.189	ENSCVAG00000012305	prpf38a	100	91.935	Cyprinodon_variegatus
ENSSFOG00015013572	prpf38a	100	82.166	ENSDARG00000039213	prpf38a	100	84.713	Danio_rerio
ENSSFOG00015013572	prpf38a	100	79.553	ENSDNOG00000042326	PRPF38A	100	78.914	Dasypus_novemcinctus
ENSSFOG00015013572	prpf38a	100	68.051	ENSDORG00000023857	-	100	97.917	Dipodomys_ordii
ENSSFOG00015013572	prpf38a	85	74.621	ENSDORG00000023691	-	67	88.298	Dipodomys_ordii
ENSSFOG00015013572	prpf38a	85	74.621	ENSDORG00000025371	-	67	88.298	Dipodomys_ordii
ENSSFOG00015013572	prpf38a	66	70.732	FBgn0050342	Prp38	57	73.936	Drosophila_melanogaster
ENSSFOG00015013572	prpf38a	77	79.916	ENSEBUG00000012588	prpf38a	71	79.821	Eptatretus_burgeri
ENSSFOG00015013572	prpf38a	100	79.553	ENSEASG00005014427	PRPF38A	100	78.914	Equus_asinus_asinus
ENSSFOG00015013572	prpf38a	100	79.553	ENSECAG00000022628	PRPF38A	100	78.914	Equus_caballus
ENSSFOG00015013572	prpf38a	72	90.541	ENSELUG00000021094	prpf38a	100	93.548	Esox_lucius
ENSSFOG00015013572	prpf38a	100	79.553	ENSFCAG00000002518	PRPF38A	100	78.914	Felis_catus
ENSSFOG00015013572	prpf38a	99	73.871	ENSFALG00000003612	-	63	87.234	Ficedula_albicollis
ENSSFOG00015013572	prpf38a	87	77.206	ENSFALG00000005598	-	100	76.471	Ficedula_albicollis
ENSSFOG00015013572	prpf38a	100	81.029	ENSFDAG00000011287	PRPF38A	100	79.032	Fukomys_damarensis
ENSSFOG00015013572	prpf38a	91	80.357	ENSFHEG00000014317	prpf38a	75	90.541	Fundulus_heteroclitus
ENSSFOG00015013572	prpf38a	54	95.181	ENSGMOG00000011384	prpf38a	54	95.181	Gadus_morhua
ENSSFOG00015013572	prpf38a	100	80.511	ENSGALG00000010627	PRPF38A	100	79.872	Gallus_gallus
ENSSFOG00015013572	prpf38a	72	89.189	ENSGAFG00000012422	prpf38a	100	92.258	Gambusia_affinis
ENSSFOG00015013572	prpf38a	50	87.821	ENSGACG00000000182	-	100	88.889	Gasterosteus_aculeatus
ENSSFOG00015013572	prpf38a	72	87.054	ENSGACG00000005423	prpf38a	100	91.667	Gasterosteus_aculeatus
ENSSFOG00015013572	prpf38a	100	80.192	ENSGAGG00000020547	PRPF38A	100	79.553	Gopherus_agassizii
ENSSFOG00015013572	prpf38a	100	79.553	ENSGGOG00000003940	PRPF38A	100	78.914	Gorilla_gorilla
ENSSFOG00015013572	prpf38a	61	93.651	ENSHBUG00000020572	prpf38a	80	93.617	Haplochromis_burtoni
ENSSFOG00015013572	prpf38a	100	72.669	ENSHGLG00000007918	-	100	70.550	Heterocephalus_glaber_female
ENSSFOG00015013572	prpf38a	100	79.553	ENSHGLG00000000475	PRPF38A	100	78.914	Heterocephalus_glaber_female
ENSSFOG00015013572	prpf38a	100	79.553	ENSHGLG00100008935	PRPF38A	100	78.914	Heterocephalus_glaber_male
ENSSFOG00015013572	prpf38a	100	72.669	ENSHGLG00100003928	-	100	70.550	Heterocephalus_glaber_male
ENSSFOG00015013572	prpf38a	59	92.857	ENSHCOG00000020781	prpf38a	59	93.085	Hippocampus_comes
ENSSFOG00015013572	prpf38a	91	78.819	ENSIPUG00000005757	prpf38a	71	91.892	Ictalurus_punctatus
ENSSFOG00015013572	prpf38a	100	79.553	ENSSTOG00000015610	PRPF38A	100	78.914	Ictidomys_tridecemlineatus
ENSSFOG00015013572	prpf38a	100	78.914	ENSJJAG00000015811	Prpf38a	100	78.275	Jaculus_jaculus
ENSSFOG00015013572	prpf38a	72	88.288	ENSKMAG00000006588	prpf38a	100	91.935	Kryptolebias_marmoratus
ENSSFOG00015013572	prpf38a	95	91.525	ENSLBEG00000020585	prpf38a	100	92.258	Labrus_bergylta
ENSSFOG00015013572	prpf38a	100	81.789	ENSLACG00000011495	PRPF38A	100	80.831	Latimeria_chalumnae
ENSSFOG00015013572	prpf38a	100	94.822	ENSLOCG00000006262	prpf38a	100	94.822	Lepisosteus_oculatus
ENSSFOG00015013572	prpf38a	100	79.553	ENSLAFG00000025862	PRPF38A	100	78.914	Loxodonta_africana
ENSSFOG00015013572	prpf38a	100	79.553	ENSMFAG00000039449	PRPF38A	100	78.914	Macaca_fascicularis
ENSSFOG00015013572	prpf38a	87	76.103	ENSMMUG00000014333	PRPF38A	98	75.092	Macaca_mulatta
ENSSFOG00015013572	prpf38a	100	54.019	ENSMNEG00000040242	-	57	55.851	Macaca_nemestrina
ENSSFOG00015013572	prpf38a	100	79.553	ENSMNEG00000031221	PRPF38A	100	78.914	Macaca_nemestrina
ENSSFOG00015013572	prpf38a	100	79.553	ENSMLEG00000041105	PRPF38A	100	78.914	Mandrillus_leucophaeus
ENSSFOG00015013572	prpf38a	72	90.090	ENSMAMG00000015431	prpf38a	100	93.226	Mastacembelus_armatus
ENSSFOG00015013572	prpf38a	72	89.189	ENSMZEG00005017838	prpf38a	100	92.581	Maylandia_zebra
ENSSFOG00015013572	prpf38a	75	85.776	ENSMGAG00000011176	PRPF38A	74	87.387	Meleagris_gallopavo
ENSSFOG00015013572	prpf38a	85	81.132	ENSMAUG00000018029	-	84	81.532	Mesocricetus_auratus
ENSSFOG00015013572	prpf38a	100	79.553	ENSMICG00000014193	PRPF38A	100	78.914	Microcebus_murinus
ENSSFOG00015013572	prpf38a	100	79.553	ENSMOCG00000013080	Prpf38a	100	78.914	Microtus_ochrogaster
ENSSFOG00015013572	prpf38a	83	84.436	ENSMMOG00000016972	prpf38a	100	82.258	Mola_mola
ENSSFOG00015013572	prpf38a	100	79.553	ENSMODG00000000644	PRPF38A	100	78.275	Monodelphis_domestica
ENSSFOG00015013572	prpf38a	72	88.288	ENSMALG00000019363	prpf38a	97	92.903	Monopterus_albus
ENSSFOG00015013572	prpf38a	100	79.233	MGP_CAROLIEiJ_G0026269	Prpf38a	100	80.192	Mus_caroli
ENSSFOG00015013572	prpf38a	100	79.233	ENSMUSG00000063800	Prpf38a	100	80.192	Mus_musculus
ENSSFOG00015013572	prpf38a	100	79.233	MGP_PahariEiJ_G0028602	Prpf38a	100	80.192	Mus_pahari
ENSSFOG00015013572	prpf38a	100	78.914	MGP_SPRETEiJ_G0027238	Prpf38a	93	91.489	Mus_spretus
ENSSFOG00015013572	prpf38a	100	79.553	ENSMPUG00000006896	PRPF38A	100	78.914	Mustela_putorius_furo
ENSSFOG00015013572	prpf38a	100	81.672	ENSNGAG00000011884	Prpf38a	100	80.259	Nannospalax_galili
ENSSFOG00015013572	prpf38a	72	89.189	ENSNBRG00000004013	prpf38a	98	85.113	Neolamprologus_brichardi
ENSSFOG00015013572	prpf38a	100	56.869	ENSNLEG00000033398	-	94	48.562	Nomascus_leucogenys
ENSSFOG00015013572	prpf38a	93	77.931	ENSNLEG00000017999	PRPF38A	93	77.241	Nomascus_leucogenys
ENSSFOG00015013572	prpf38a	97	62.376	ENSNLEG00000012592	-	99	62.706	Nomascus_leucogenys
ENSSFOG00015013572	prpf38a	100	77.636	ENSMEUG00000003860	PRPF38A	100	77.955	Notamacropus_eugenii
ENSSFOG00015013572	prpf38a	74	84.716	ENSOPRG00000008985	PRPF38A	92	86.036	Ochotona_princeps
ENSSFOG00015013572	prpf38a	100	79.553	ENSODEG00000005869	PRPF38A	100	78.914	Octodon_degus
ENSSFOG00015013572	prpf38a	72	88.288	ENSONIG00000007816	prpf38a	100	91.935	Oreochromis_niloticus
ENSSFOG00015013572	prpf38a	100	49.841	ENSOANG00000009541	-	100	48.254	Ornithorhynchus_anatinus
ENSSFOG00015013572	prpf38a	100	79.553	ENSOCUG00000000963	PRPF38A	100	78.914	Oryctolagus_cuniculus
ENSSFOG00015013572	prpf38a	96	90.572	ENSORLG00000013485	prpf38a	99	91.909	Oryzias_latipes
ENSSFOG00015013572	prpf38a	96	90.572	ENSORLG00020002130	prpf38a	99	91.909	Oryzias_latipes_hni
ENSSFOG00015013572	prpf38a	96	90.909	ENSORLG00015021393	prpf38a	99	91.586	Oryzias_latipes_hsok
ENSSFOG00015013572	prpf38a	95	90.169	ENSOMEG00000016333	prpf38a	100	91.290	Oryzias_melastigma
ENSSFOG00015013572	prpf38a	100	79.553	ENSOGAG00000005423	PRPF38A	100	78.914	Otolemur_garnettii
ENSSFOG00015013572	prpf38a	100	79.553	ENSOARG00000005373	PRPF38A	100	78.914	Ovis_aries
ENSSFOG00015013572	prpf38a	100	79.553	ENSPPAG00000030905	PRPF38A	100	78.914	Pan_paniscus
ENSSFOG00015013572	prpf38a	100	67.732	ENSPPAG00000033867	-	56	74.566	Pan_paniscus
ENSSFOG00015013572	prpf38a	100	79.553	ENSPPRG00000013268	PRPF38A	100	78.914	Panthera_pardus
ENSSFOG00015013572	prpf38a	100	79.553	ENSPTIG00000015419	PRPF38A	100	78.914	Panthera_tigris_altaica
ENSSFOG00015013572	prpf38a	100	79.553	ENSPTRG00000000739	PRPF38A	100	78.914	Pan_troglodytes
ENSSFOG00015013572	prpf38a	100	79.553	ENSPANG00000015483	PRPF38A	100	78.914	Papio_anubis
ENSSFOG00015013572	prpf38a	100	94.498	ENSPKIG00000011439	prpf38a	100	94.822	Paramormyrops_kingsleyae
ENSSFOG00015013572	prpf38a	100	79.872	ENSPSIG00000017487	PRPF38A	100	78.914	Pelodiscus_sinensis
ENSSFOG00015013572	prpf38a	84	79.231	ENSPMGG00000021352	prpf38a	76	87.838	Periophthalmus_magnuspinnatus
ENSSFOG00015013572	prpf38a	100	79.553	ENSPEMG00000023277	-	100	78.914	Peromyscus_maniculatus_bairdii
ENSSFOG00015013572	prpf38a	100	79.048	ENSPEMG00000011212	-	100	75.238	Peromyscus_maniculatus_bairdii
ENSSFOG00015013572	prpf38a	100	79.233	ENSPCIG00000022369	-	100	77.955	Phascolarctos_cinereus
ENSSFOG00015013572	prpf38a	95	82.550	ENSPFOG00000004248	prpf38a	100	92.258	Poecilia_formosa
ENSSFOG00015013572	prpf38a	92	77.509	ENSPLAG00000010328	prpf38a	100	92.258	Poecilia_latipinna
ENSSFOG00015013572	prpf38a	92	77.509	ENSPMEG00000011804	prpf38a	100	92.258	Poecilia_mexicana
ENSSFOG00015013572	prpf38a	95	77.667	ENSPREG00000002835	prpf38a	58	93.617	Poecilia_reticulata
ENSSFOG00015013572	prpf38a	100	71.069	ENSPPYG00000001348	PRPF38A	100	70.755	Pongo_abelii
ENSSFOG00015013572	prpf38a	100	79.872	ENSPCAG00000013328	PRPF38A	100	79.233	Procavia_capensis
ENSSFOG00015013572	prpf38a	100	79.553	ENSPCOG00000016387	-	100	78.914	Propithecus_coquereli
ENSSFOG00015013572	prpf38a	100	64.194	ENSPCOG00000020709	-	64	78.191	Propithecus_coquereli
ENSSFOG00015013572	prpf38a	100	79.553	ENSPVAG00000009803	PRPF38A	100	78.914	Pteropus_vampyrus
ENSSFOG00015013572	prpf38a	72	89.189	ENSPNYG00000005571	prpf38a	100	92.581	Pundamilia_nyererei
ENSSFOG00015013572	prpf38a	100	81.847	ENSPNAG00000010399	prpf38a	100	85.669	Pygocentrus_nattereri
ENSSFOG00015013572	prpf38a	100	79.872	ENSRNOG00000009451	Prpf38a	100	79.233	Rattus_norvegicus
ENSSFOG00015013572	prpf38a	100	79.553	ENSRBIG00000036442	PRPF38A	100	78.914	Rhinopithecus_bieti
ENSSFOG00015013572	prpf38a	100	79.553	ENSRROG00000032788	PRPF38A	100	78.914	Rhinopithecus_roxellana
ENSSFOG00015013572	prpf38a	98	68.525	ENSRROG00000040003	-	60	74.468	Rhinopithecus_roxellana
ENSSFOG00015013572	prpf38a	100	79.553	ENSSBOG00000019515	PRPF38A	100	78.914	Saimiri_boliviensis_boliviensis
ENSSFOG00015013572	prpf38a	96	63.696	ENSSHAG00000006029	-	62	81.818	Sarcophilus_harrisii
ENSSFOG00015013572	prpf38a	86	76.015	ENSSHAG00000006906	-	100	74.539	Sarcophilus_harrisii
ENSSFOG00015013572	prpf38a	72	87.387	ENSSMAG00000015379	prpf38a	99	91.883	Scophthalmus_maximus
ENSSFOG00015013572	prpf38a	72	89.640	ENSSDUG00000001324	prpf38a	100	92.903	Seriola_dumerili
ENSSFOG00015013572	prpf38a	72	89.640	ENSSLDG00000014803	prpf38a	100	92.903	Seriola_lalandi_dorsalis
ENSSFOG00015013572	prpf38a	100	62.620	ENSSARG00000014458	PRPF38A	100	62.300	Sorex_araneus
ENSSFOG00015013572	prpf38a	100	79.872	ENSSPUG00000013259	PRPF38A	100	80.831	Sphenodon_punctatus
ENSSFOG00015013572	prpf38a	72	73.423	ENSSPAG00000010449	prpf38a	100	73.139	Stegastes_partitus
ENSSFOG00015013572	prpf38a	100	79.553	ENSSSCG00000028288	PRPF38A	100	78.914	Sus_scrofa
ENSSFOG00015013572	prpf38a	100	76.677	ENSTGUG00000008995	PRPF38A	100	76.038	Taeniopygia_guttata
ENSSFOG00015013572	prpf38a	72	88.288	ENSTRUG00000003374	prpf38a	68	90.090	Takifugu_rubripes
ENSSFOG00015013572	prpf38a	72	85.714	ENSTNIG00000005533	prpf38a	100	90.064	Tetraodon_nigroviridis
ENSSFOG00015013572	prpf38a	100	78.914	ENSTBEG00000000725	PRPF38A	100	78.275	Tupaia_belangeri
ENSSFOG00015013572	prpf38a	100	79.553	ENSTTRG00000016139	PRPF38A	100	78.914	Tursiops_truncatus
ENSSFOG00015013572	prpf38a	100	79.553	ENSUAMG00000000625	PRPF38A	100	78.914	Ursus_americanus
ENSSFOG00015013572	prpf38a	100	79.553	ENSUMAG00000022674	PRPF38A	100	78.914	Ursus_maritimus
ENSSFOG00015013572	prpf38a	75	84.052	ENSVPAG00000000907	PRPF38A	71	86.486	Vicugna_pacos
ENSSFOG00015013572	prpf38a	100	79.553	ENSVVUG00000004475	PRPF38A	100	78.914	Vulpes_vulpes
ENSSFOG00015013572	prpf38a	100	79.936	ENSXETG00000008060	prpf38a	100	75.949	Xenopus_tropicalis
ENSSFOG00015013572	prpf38a	72	87.054	ENSXCOG00000007393	prpf38a	100	83.280	Xiphophorus_couchianus
ENSSFOG00015013572	prpf38a	72	89.189	ENSXMAG00000026143	prpf38a	100	92.258	Xiphophorus_maculatus