EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015013823 (Gene tree)
Gene ID
108926131
Gene Symbol
smarca4
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
14248 bases
Position
chrKV410851.1:1282152-1296399
Accession
108926131
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015021629ResIIIPF04851.152e-0911
ENSSFOP00015021536ResIIIPF04851.152.1e-0911
ENSSFOP00015021629BRKPF07533.167.1e-1711
ENSSFOP00015021536BRKPF07533.167.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015021775-5641XM_018738649ENSSFOP000150215361630 (aa)XP_018594165A0A1W4Z0U9
ENSSFOT00015021871-4821-ENSSFOP000150216291606 (aa)--
Gene Model
Click here to download ENSSFOG00015013823's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013823's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015013823smarca48975.781ENSSFOG00015014870SMARCA29377.541
ENSSFOG00015013823smarca49687.611ENSSFOG00015009921-9687.775
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015013823smarca410087.485ENSG00000127616SMARCA499100.000Homo_sapiens
ENSSFOG00015013823smarca49585.197ENSAPOG00000004542SMARCA49988.968Acanthochromis_polyacanthus
ENSSFOG00015013823smarca47790.507ENSAPOG00000003509smarca4a9989.809Acanthochromis_polyacanthus
ENSSFOG00015013823smarca410083.158ENSAMEG00000010868SMARCA410084.201Ailuropoda_melanoleuca
ENSSFOG00015013823smarca49388.837ENSACIG00000003035-9788.993Amphilophus_citrinellus
ENSSFOG00015013823smarca49991.140ENSACIG00000021550smarca4a9891.326Amphilophus_citrinellus
ENSSFOG00015013823smarca49487.078ENSAOCG00000009450-9787.638Amphiprion_ocellaris
ENSSFOG00015013823smarca48791.465ENSAOCG00000019167smarca4a10091.471Amphiprion_ocellaris
ENSSFOG00015013823smarca48791.536ENSAPEG00000015559smarca4a10091.542Amphiprion_percula
ENSSFOG00015013823smarca49984.579ENSAPEG00000023108-9886.825Amphiprion_percula
ENSSFOG00015013823smarca49985.984ENSATEG00000001094-9787.751Anabas_testudineus
ENSSFOG00015013823smarca410090.970ENSATEG00000011524smarca4a10090.848Anabas_testudineus
ENSSFOG00015013823smarca49987.154ENSANAG00000036991SMARCA410085.576Aotus_nancymaae
ENSSFOG00015013823smarca49388.652ENSACLG00000008638-9888.600Astatotilapia_calliptera
ENSSFOG00015013823smarca49990.317ENSACLG00000000163smarca4a10089.224Astatotilapia_calliptera
ENSSFOG00015013823smarca49590.072ENSAMXG00000021023smarca4a9990.215Astyanax_mexicanus
ENSSFOG00015013823smarca49488.557ENSAMXG00000011238-9689.151Astyanax_mexicanus
ENSSFOG00015013823smarca410088.041ENSBTAG00000019220SMARCA410088.774Bos_taurus
ENSSFOG00015013823smarca49789.635ENSCJAG00000005936SMARCA410084.687Callithrix_jacchus
ENSSFOG00015013823smarca410087.310ENSCAFG00000017584SMARCA410088.518Canis_familiaris
ENSSFOG00015013823smarca410086.103ENSCAFG00020024620SMARCA49988.518Canis_lupus_dingo
ENSSFOG00015013823smarca410084.339ENSCHIG00000015318SMARCA410085.619Capra_hircus
ENSSFOG00015013823smarca410087.492ENSTSYG00000012966SMARCA410088.713Carlito_syrichta
ENSSFOG00015013823smarca49285.384ENSCAPG00000015932SMARCA49491.248Cavia_aperea
ENSSFOG00015013823smarca410087.189ENSCPOG00000015549SMARCA410088.335Cavia_porcellus
ENSSFOG00015013823smarca410084.350ENSCCAG00000031660SMARCA49985.732Cebus_capucinus
ENSSFOG00015013823smarca410087.432ENSCATG00000029530SMARCA410088.578Cercocebus_atys
ENSSFOG00015013823smarca410087.302ENSCLAG00000011946SMARCA410088.584Chinchilla_lanigera
ENSSFOG00015013823smarca410087.720ENSCPBG00000009994SMARCA410088.389Chrysemys_picta_bellii
ENSSFOG00015013823smarca410087.371ENSCANG00000036013SMARCA410088.578Colobus_angolensis_palliatus
ENSSFOG00015013823smarca410087.189ENSCGRG00001016732Smarca410088.335Cricetulus_griseus_chok1gshd
ENSSFOG00015013823smarca410087.189ENSCGRG00000017242Smarca410088.335Cricetulus_griseus_crigri
ENSSFOG00015013823smarca49689.311ENSCSEG00000014771smarca4a9989.177Cynoglossus_semilaevis
ENSSFOG00015013823smarca49989.653ENSCVAG00000006979smarca4a9989.845Cyprinodon_variegatus
ENSSFOG00015013823smarca49984.848ENSCVAG00000003018-9885.187Cyprinodon_variegatus
ENSSFOG00015013823smarca410091.198ENSDARG00000077226smarca4a10091.748Danio_rerio
ENSSFOG00015013823smarca49285.923ENSDARG00000104339SMARCA49486.056Danio_rerio
ENSSFOG00015013823smarca49785.111ENSDNOG00000048847SMARCA49092.541Dasypus_novemcinctus
ENSSFOG00015013823smarca48581.437ENSDORG00000002544Smarca49183.960Dipodomys_ordii
ENSSFOG00015013823smarca49476.399ENSETEG00000013361SMARCA49477.417Echinops_telfairi
ENSSFOG00015013823smarca410087.189ENSEASG00005006167SMARCA410086.556Equus_asinus_asinus
ENSSFOG00015013823smarca410087.250ENSECAG00000008334SMARCA410088.457Equus_caballus
ENSSFOG00015013823smarca49880.349ENSELUG00000023232-9778.609Esox_lucius
ENSSFOG00015013823smarca410089.994ENSELUG00000010247smarca4a10089.630Esox_lucius
ENSSFOG00015013823smarca410087.273ENSFCAG00000004894SMARCA410088.417Felis_catus
ENSSFOG00015013823smarca47492.301ENSFALG00000004208SMARCA49583.713Ficedula_albicollis
ENSSFOG00015013823smarca49286.821ENSFDAG00000012237SMARCA49788.742Fukomys_damarensis
ENSSFOG00015013823smarca49688.136ENSFHEG00000010182smarca4a10088.385Fundulus_heteroclitus
ENSSFOG00015013823smarca49985.535ENSFHEG00000007902-9986.251Fundulus_heteroclitus
ENSSFOG00015013823smarca48888.136ENSGMOG00000002649smarca4a9485.757Gadus_morhua
ENSSFOG00015013823smarca49281.320ENSGMOG00000005756-9080.532Gadus_morhua
ENSSFOG00015013823smarca47386.164ENSGALG00000047145SMARCA410087.490Gallus_gallus
ENSSFOG00015013823smarca48889.539ENSGAFG00000014900smarca4a9989.328Gambusia_affinis
ENSSFOG00015013823smarca49784.872ENSGAFG00000008827-9885.577Gambusia_affinis
ENSSFOG00015013823smarca49888.702ENSGACG00000006691smarca4a10088.476Gasterosteus_aculeatus
ENSSFOG00015013823smarca49980.346ENSGACG00000016033-9980.574Gasterosteus_aculeatus
ENSSFOG00015013823smarca410087.942ENSGAGG00000016757SMARCA410088.611Gopherus_agassizii
ENSSFOG00015013823smarca410087.432ENSGGOG00000009882SMARCA410088.578Gorilla_gorilla
ENSSFOG00015013823smarca49985.689ENSHBUG00000005447-9888.800Haplochromis_burtoni
ENSSFOG00015013823smarca410090.759ENSHBUG00000021172smarca4a10091.214Haplochromis_burtoni
ENSSFOG00015013823smarca410088.029ENSHGLG00000010519SMARCA410087.787Heterocephalus_glaber_female
ENSSFOG00015013823smarca410087.871ENSHGLG00100013774SMARCA410087.326Heterocephalus_glaber_male
ENSSFOG00015013823smarca49590.354ENSHCOG00000009510smarca4a9690.693Hippocampus_comes
ENSSFOG00015013823smarca410090.262ENSIPUG00000006107smarca4a10091.254Ictalurus_punctatus
ENSSFOG00015013823smarca49686.528ENSIPUG00000016346-9587.344Ictalurus_punctatus
ENSSFOG00015013823smarca410087.189ENSSTOG00000007939SMARCA410088.335Ictidomys_tridecemlineatus
ENSSFOG00015013823smarca410085.179ENSJJAG00000012877Smarca410086.063Jaculus_jaculus
ENSSFOG00015013823smarca49985.364ENSKMAG00000019518-9887.412Kryptolebias_marmoratus
ENSSFOG00015013823smarca410089.548ENSKMAG00000011931smarca4a10089.853Kryptolebias_marmoratus
ENSSFOG00015013823smarca49587.532ENSLBEG00000017383smarca4a9787.090Labrus_bergylta
ENSSFOG00015013823smarca49983.846ENSLBEG00000020655-9883.256Labrus_bergylta
ENSSFOG00015013823smarca45282.787ENSLACG00000015309SMARCA410082.904Latimeria_chalumnae
ENSSFOG00015013823smarca410088.753ENSLOCG00000007820smarca4a9988.154Lepisosteus_oculatus
ENSSFOG00015013823smarca410087.212ENSLAFG00000001433SMARCA410088.357Loxodonta_africana
ENSSFOG00015013823smarca410086.224ENSMFAG00000032146SMARCA49988.578Macaca_fascicularis
ENSSFOG00015013823smarca410087.432ENSMMUG00000012042SMARCA410088.578Macaca_mulatta
ENSSFOG00015013823smarca410087.416ENSMNEG00000028512SMARCA410088.450Macaca_nemestrina
ENSSFOG00015013823smarca410087.273ENSMLEG00000034976SMARCA410088.357Mandrillus_leucophaeus
ENSSFOG00015013823smarca410090.526ENSMAMG00000009256smarca4a10090.954Mastacembelus_armatus
ENSSFOG00015013823smarca49985.136ENSMAMG00000002841-9888.054Mastacembelus_armatus
ENSSFOG00015013823smarca49586.464ENSMZEG00005023861-9887.247Maylandia_zebra
ENSSFOG00015013823smarca410090.514ENSMZEG00005003889smarca4a10090.970Maylandia_zebra
ENSSFOG00015013823smarca410086.909ENSMAUG00000020731Smarca410087.939Mesocricetus_auratus
ENSSFOG00015013823smarca410087.152ENSMICG00000009806SMARCA410088.296Microcebus_murinus
ENSSFOG00015013823smarca410086.909ENSMOCG00000022209Smarca410088.053Microtus_ochrogaster
ENSSFOG00015013823smarca49589.375ENSMMOG00000007571smarca4a9889.711Mola_mola
ENSSFOG00015013823smarca49785.962ENSMMOG00000008466-9885.723Mola_mola
ENSSFOG00015013823smarca410086.456ENSMODG00000006287SMARCA410086.925Monodelphis_domestica
ENSSFOG00015013823smarca49690.582ENSMALG00000003388smarca4a10090.976Monopterus_albus
ENSSFOG00015013823smarca48787.821ENSMALG00000021534-9988.060Monopterus_albus
ENSSFOG00015013823smarca410087.181MGP_CAROLIEiJ_G0031879Smarca410088.328Mus_caroli
ENSSFOG00015013823smarca410087.181ENSMUSG00000032187Smarca410088.328Mus_musculus
ENSSFOG00015013823smarca410087.561MGP_PahariEiJ_G0014745Smarca410087.980Mus_pahari
ENSSFOG00015013823smarca410087.181MGP_SPRETEiJ_G0033003Smarca410088.328Mus_spretus
ENSSFOG00015013823smarca410087.371ENSMPUG00000005711SMARCA410088.518Mustela_putorius_furo
ENSSFOG00015013823smarca410087.606ENSMLUG00000004491-10088.578Myotis_lucifugus
ENSSFOG00015013823smarca410087.401ENSNGAG00000021852Smarca410088.314Nannospalax_galili
ENSSFOG00015013823smarca48788.984ENSNBRG00000018865-9988.770Neolamprologus_brichardi
ENSSFOG00015013823smarca49391.438ENSNBRG00000011457smarca4a9692.118Neolamprologus_brichardi
ENSSFOG00015013823smarca49584.493ENSNLEG00000012389SMARCA49485.988Nomascus_leucogenys
ENSSFOG00015013823smarca48093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSSFOG00015013823smarca410086.388ENSODEG00000017127SMARCA410085.282Octodon_degus
ENSSFOG00015013823smarca410091.310ENSONIG00000008196smarca4a10091.153Oreochromis_niloticus
ENSSFOG00015013823smarca49985.869ENSONIG00000018040-9986.792Oreochromis_niloticus
ENSSFOG00015013823smarca49881.835ENSOCUG00000001787SMARCA49883.281Oryctolagus_cuniculus
ENSSFOG00015013823smarca49585.480ENSORLG00000003955-9986.140Oryzias_latipes
ENSSFOG00015013823smarca49989.653ENSORLG00000015452smarca4a9989.653Oryzias_latipes
ENSSFOG00015013823smarca49585.489ENSORLG00020009728-9986.148Oryzias_latipes_hni
ENSSFOG00015013823smarca49989.343ENSORLG00020004611smarca4a9989.653Oryzias_latipes_hni
ENSSFOG00015013823smarca49989.467ENSORLG00015016560smarca4a9989.715Oryzias_latipes_hsok
ENSSFOG00015013823smarca49985.046ENSORLG00015007739-9985.957Oryzias_latipes_hsok
ENSSFOG00015013823smarca49989.882ENSOMEG00000007486smarca4a9990.006Oryzias_melastigma
ENSSFOG00015013823smarca49685.367ENSOMEG00000016626-9985.966Oryzias_melastigma
ENSSFOG00015013823smarca48985.637ENSOGAG00000016148SMARCA410087.458Otolemur_garnettii
ENSSFOG00015013823smarca410087.370ENSOARG00000017454SMARCA410088.225Ovis_aries
ENSSFOG00015013823smarca410087.432ENSPPAG00000043191SMARCA410088.578Pan_paniscus
ENSSFOG00015013823smarca410087.273ENSPPRG00000000064SMARCA410088.417Panthera_pardus
ENSSFOG00015013823smarca47987.678ENSPTIG00000017447SMARCA410082.290Panthera_tigris_altaica
ENSSFOG00015013823smarca410087.432ENSPTRG00000010488SMARCA410088.578Pan_troglodytes
ENSSFOG00015013823smarca410086.328ENSPANG00000011042SMARCA49988.571Papio_anubis
ENSSFOG00015013823smarca410088.610ENSPKIG00000010087-9690.116Paramormyrops_kingsleyae
ENSSFOG00015013823smarca410094.179ENSPKIG00000007770SMARCA410094.547Paramormyrops_kingsleyae
ENSSFOG00015013823smarca410083.433ENSPSIG00000005547SMARCA49984.611Pelodiscus_sinensis
ENSSFOG00015013823smarca410086.970ENSPEMG00000020389Smarca410088.114Peromyscus_maniculatus_bairdii
ENSSFOG00015013823smarca410088.078ENSPCIG00000017138SMARCA410089.105Phascolarctos_cinereus
ENSSFOG00015013823smarca48889.187ENSPFOG00000012930-9984.217Poecilia_formosa
ENSSFOG00015013823smarca410087.704ENSPFOG00000007892smarca4a10088.613Poecilia_formosa
ENSSFOG00015013823smarca410087.644ENSPLAG00000014294smarca4a10088.552Poecilia_latipinna
ENSSFOG00015013823smarca48291.370ENSPLAG00000018616-9887.183Poecilia_latipinna
ENSSFOG00015013823smarca49787.716ENSPMEG00000008929-9888.107Poecilia_mexicana
ENSSFOG00015013823smarca49588.400ENSPMEG00000003725smarca4a9789.101Poecilia_mexicana
ENSSFOG00015013823smarca49784.244ENSPREG00000014823-9786.872Poecilia_reticulata
ENSSFOG00015013823smarca49985.059ENSPREG00000014608smarca4a10088.271Poecilia_reticulata
ENSSFOG00015013823smarca410085.655ENSPPYG00000009568SMARCA410086.361Pongo_abelii
ENSSFOG00015013823smarca47988.079ENSPCAG00000014054SMARCA47591.473Procavia_capensis
ENSSFOG00015013823smarca410087.091ENSPCOG00000023011SMARCA410088.235Propithecus_coquereli
ENSSFOG00015013823smarca49580.072ENSPVAG00000007787SMARCA49684.712Pteropus_vampyrus
ENSSFOG00015013823smarca49388.837ENSPNYG00000023995-9888.793Pundamilia_nyererei
ENSSFOG00015013823smarca49791.296ENSPNYG00000000717smarca4a9691.656Pundamilia_nyererei
ENSSFOG00015013823smarca49590.111ENSPNAG00000024136smarca4a9790.241Pygocentrus_nattereri
ENSSFOG00015013823smarca49588.739ENSPNAG00000006636-9489.088Pygocentrus_nattereri
ENSSFOG00015013823smarca410087.181ENSRNOG00000009271Smarca410088.328Rattus_norvegicus
ENSSFOG00015013823smarca410086.163ENSRBIG00000038696SMARCA49988.518Rhinopithecus_bieti
ENSSFOG00015013823smarca410087.371ENSRROG00000045509SMARCA410088.518Rhinopithecus_roxellana
ENSSFOG00015013823smarca49987.272ENSSBOG00000026896SMARCA49988.909Saimiri_boliviensis_boliviensis
ENSSFOG00015013823smarca410088.017ENSSHAG00000001642SMARCA410089.166Sarcophilus_harrisii
ENSSFOG00015013823smarca49983.192ENSSMAG00000014082-9984.354Scophthalmus_maximus
ENSSFOG00015013823smarca410088.452ENSSMAG00000003200smarca4a10089.057Scophthalmus_maximus
ENSSFOG00015013823smarca410085.993ENSSDUG00000017298smarca4a10085.957Seriola_dumerili
ENSSFOG00015013823smarca49987.252ENSSDUG00000005388-9886.742Seriola_dumerili
ENSSFOG00015013823smarca49587.001ENSSLDG00000023663-9788.171Seriola_lalandi_dorsalis
ENSSFOG00015013823smarca410090.617ENSSLDG00000024486smarca4a10092.422Seriola_lalandi_dorsalis
ENSSFOG00015013823smarca46298.137ENSSARG00000013477SMARCA48198.137Sorex_araneus
ENSSFOG00015013823smarca49585.096ENSSPUG00000004558SMARCA49885.560Sphenodon_punctatus
ENSSFOG00015013823smarca49984.419ENSSPAG00000012533-9985.234Stegastes_partitus
ENSSFOG00015013823smarca410089.709ENSSPAG00000004248smarca4a9991.265Stegastes_partitus
ENSSFOG00015013823smarca410087.576ENSSSCG00000013629SMARCA410088.478Sus_scrofa
ENSSFOG00015013823smarca45285.277ENSTGUG00000015488-9885.154Taeniopygia_guttata
ENSSFOG00015013823smarca48984.573ENSTRUG00000004885smarca4a10086.728Takifugu_rubripes
ENSSFOG00015013823smarca49584.522ENSTRUG00000001378SMARCA49885.515Takifugu_rubripes
ENSSFOG00015013823smarca47388.298ENSTNIG00000004859-10088.298Tetraodon_nigroviridis
ENSSFOG00015013823smarca49983.313ENSTNIG00000004536SMARCA49984.211Tetraodon_nigroviridis
ENSSFOG00015013823smarca410084.386ENSTTRG00000009519SMARCA410084.744Tursiops_truncatus
ENSSFOG00015013823smarca410087.371ENSUAMG00000014661SMARCA410088.518Ursus_americanus
ENSSFOG00015013823smarca49787.477ENSUMAG00000022005SMARCA49992.221Ursus_maritimus
ENSSFOG00015013823smarca410086.103ENSVVUG00000017820SMARCA49788.518Vulpes_vulpes
ENSSFOG00015013823smarca410083.413ENSXETG00000009355smarca49984.069Xenopus_tropicalis
ENSSFOG00015013823smarca49787.091ENSXCOG00000013494-9886.718Xiphophorus_couchianus
ENSSFOG00015013823smarca49786.962ENSXMAG00000007030-9986.792Xiphophorus_maculatus
ENSSFOG00015013823smarca410087.675ENSXMAG00000006321smarca4a10089.321Xiphophorus_maculatus

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