EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015013921 (Gene tree)
Gene ID: 108922089
Gene Symbol: gnl1
Alias: zgc:154008
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13346 bases
Position: chrKV410810.1:243145-256490
Accession: 108922089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021668	MMR_HSR1	PF01926.23	1.7e-14	1	1
ENSSFOP00015021638	MMR_HSR1	PF01926.23	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015021910	-	1752	-	ENSSFOP00015021668	583 (aa)	-	-
ENSSFOT00015021879	-	6382	XM_018731986	ENSSFOP00015021638	605 (aa)	XP_018587502	A0A1W4Y7I9

Gene Model

Click here to download ENSSFOG00015013921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015013921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015013921	gnl1	68	30.000	ENSSFOG00015008955	lsg1	68	30.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015013921	gnl1	99	59.451	ENSG00000204590	GNL1	90	62.842	Homo_sapiens
ENSSFOG00015013921	gnl1	100	72.568	ENSAPOG00000006315	gnl1	100	65.909	Acanthochromis_polyacanthus
ENSSFOG00015013921	gnl1	99	59.612	ENSAMEG00000013421	GNL1	90	62.477	Ailuropoda_melanoleuca
ENSSFOG00015013921	gnl1	100	73.899	ENSACIG00000013539	gnl1	100	71.686	Amphilophus_citrinellus
ENSSFOG00015013921	gnl1	100	74.188	ENSAOCG00000008320	gnl1	100	71.661	Amphiprion_ocellaris
ENSSFOG00015013921	gnl1	100	74.026	ENSAPEG00000011154	gnl1	100	71.498	Amphiprion_percula
ENSSFOG00015013921	gnl1	100	74.026	ENSATEG00000020647	gnl1	100	72.638	Anabas_testudineus
ENSSFOG00015013921	gnl1	89	61.844	ENSACAG00000010395	GNL1	87	63.071	Anolis_carolinensis
ENSSFOG00015013921	gnl1	99	59.742	ENSANAG00000028106	GNL1	90	62.613	Aotus_nancymaae
ENSSFOG00015013921	gnl1	100	74.715	ENSACLG00000025394	gnl1	100	72.340	Astatotilapia_calliptera
ENSSFOG00015013921	gnl1	100	66.227	ENSAMXG00000016080	gnl1	90	75.233	Astyanax_mexicanus
ENSSFOG00015013921	gnl1	99	59.774	ENSBTAG00000025516	GNL1	90	62.659	Bos_taurus
ENSSFOG00015013921	gnl1	99	59.742	ENSCJAG00000019996	GNL1	90	62.613	Callithrix_jacchus
ENSSFOG00015013921	gnl1	99	59.289	ENSCAFG00000000396	GNL1	90	62.295	Canis_familiaris
ENSSFOG00015013921	gnl1	99	59.289	ENSCAFG00020017556	GNL1	90	62.295	Canis_lupus_dingo
ENSSFOG00015013921	gnl1	99	59.612	ENSCHIG00000019763	GNL1	90	62.477	Capra_hircus
ENSSFOG00015013921	gnl1	99	60.097	ENSTSYG00000000164	GNL1	90	63.024	Carlito_syrichta
ENSSFOG00015013921	gnl1	91	59.259	ENSCAPG00000006662	GNL1	86	61.996	Cavia_aperea
ENSSFOG00015013921	gnl1	99	58.738	ENSCPOG00000001944	GNL1	90	61.384	Cavia_porcellus
ENSSFOG00015013921	gnl1	99	59.935	ENSCCAG00000037467	GNL1	90	62.842	Cebus_capucinus
ENSSFOG00015013921	gnl1	99	59.774	ENSCATG00000045232	GNL1	90	62.659	Cercocebus_atys
ENSSFOG00015013921	gnl1	96	57.118	ENSCLAG00000012557	GNL1	88	61.197	Chinchilla_lanigera
ENSSFOG00015013921	gnl1	99	59.774	ENSCSAG00000008202	GNL1	90	62.659	Chlorocebus_sabaeus
ENSSFOG00015013921	gnl1	87	52.347	ENSCHOG00000010907	GNL1	77	61.905	Choloepus_hoffmanni
ENSSFOG00015013921	gnl1	88	63.352	ENSCPBG00000018821	GNL1	91	64.340	Chrysemys_picta_bellii
ENSSFOG00015013921	gnl1	88	49.814	ENSCING00000014499	-	100	50.186	Ciona_intestinalis
ENSSFOG00015013921	gnl1	92	46.809	ENSCSAVG00000007354	-	90	48.141	Ciona_savignyi
ENSSFOG00015013921	gnl1	99	59.774	ENSCANG00000012933	GNL1	90	62.659	Colobus_angolensis_palliatus
ENSSFOG00015013921	gnl1	99	60.032	ENSCGRG00001004986	Gnl1	90	63.024	Cricetulus_griseus_chok1gshd
ENSSFOG00015013921	gnl1	96	58.348	ENSCGRG00000014309	Gnl1	88	62.355	Cricetulus_griseus_crigri
ENSSFOG00015013921	gnl1	89	64.388	ENSCSEG00000019714	gnl1	90	64.587	Cynoglossus_semilaevis
ENSSFOG00015013921	gnl1	100	69.756	ENSCVAG00000022650	gnl1	89	73.945	Cyprinodon_variegatus
ENSSFOG00015013921	gnl1	100	73.650	ENSDARG00000061789	gnl1	100	72.459	Danio_rerio
ENSSFOG00015013921	gnl1	99	51.691	ENSDNOG00000041571	GNL1	88	55.576	Dasypus_novemcinctus
ENSSFOG00015013921	gnl1	91	42.857	FBgn0032882	Ns4	83	44.177	Drosophila_melanogaster
ENSSFOG00015013921	gnl1	54	60.185	ENSETEG00000005518	-	80	65.863	Echinops_telfairi
ENSSFOG00015013921	gnl1	60	52.394	ENSEBUG00000009531	-	82	59.794	Eptatretus_burgeri
ENSSFOG00015013921	gnl1	99	59.612	ENSEASG00005018610	GNL1	90	62.659	Equus_asinus_asinus
ENSSFOG00015013921	gnl1	99	59.774	ENSECAG00000023081	GNL1	90	62.659	Equus_caballus
ENSSFOG00015013921	gnl1	100	72.231	ENSELUG00000006281	gnl1	100	72.231	Esox_lucius
ENSSFOG00015013921	gnl1	99	59.451	ENSFCAG00000007676	GNL1	90	62.295	Felis_catus
ENSSFOG00015013921	gnl1	91	59.259	ENSFDAG00000000584	GNL1	88	62.446	Fukomys_damarensis
ENSSFOG00015013921	gnl1	100	69.431	ENSFHEG00000011353	gnl1	89	73.713	Fundulus_heteroclitus
ENSSFOG00015013921	gnl1	99	69.431	ENSGMOG00000015224	gnl1	100	69.268	Gadus_morhua
ENSSFOG00015013921	gnl1	88	76.022	ENSGAFG00000014611	gnl1	88	75.646	Gambusia_affinis
ENSSFOG00015013921	gnl1	99	70.096	ENSGACG00000009765	gnl1	100	68.167	Gasterosteus_aculeatus
ENSSFOG00015013921	gnl1	99	59.289	ENSGGOG00000014590	GNL1	90	62.659	Gorilla_gorilla
ENSSFOG00015013921	gnl1	100	74.715	ENSHBUG00000016745	gnl1	100	72.340	Haplochromis_burtoni
ENSSFOG00015013921	gnl1	99	57.189	ENSHGLG00000017193	GNL1	89	60.838	Heterocephalus_glaber_female
ENSSFOG00015013921	gnl1	91	57.671	ENSHGLG00100009994	GNL1	88	60.300	Heterocephalus_glaber_male
ENSSFOG00015013921	gnl1	100	73.377	ENSHCOG00000012493	gnl1	100	70.521	Hippocampus_comes
ENSSFOG00015013921	gnl1	88	74.302	ENSIPUG00000004850	gnl1	100	69.836	Ictalurus_punctatus
ENSSFOG00015013921	gnl1	99	59.871	ENSSTOG00000011822	GNL1	90	62.774	Ictidomys_tridecemlineatus
ENSSFOG00015013921	gnl1	99	59.547	ENSJJAG00000010831	-	90	62.477	Jaculus_jaculus
ENSSFOG00015013921	gnl1	88	76.340	ENSKMAG00000009059	gnl1	89	75.963	Kryptolebias_marmoratus
ENSSFOG00015013921	gnl1	99	71.637	ENSLBEG00000011038	gnl1	99	69.431	Labrus_bergylta
ENSSFOG00015013921	gnl1	99	60.000	ENSLACG00000001713	GNL1	89	64.022	Latimeria_chalumnae
ENSSFOG00015013921	gnl1	99	58.966	ENSLAFG00000030406	GNL1	92	60.498	Loxodonta_africana
ENSSFOG00015013921	gnl1	99	59.774	ENSMFAG00000001167	GNL1	90	62.659	Macaca_fascicularis
ENSSFOG00015013921	gnl1	99	59.774	ENSMMUG00000020077	GNL1	90	62.659	Macaca_mulatta
ENSSFOG00015013921	gnl1	99	59.774	ENSMNEG00000031618	GNL1	90	62.659	Macaca_nemestrina
ENSSFOG00015013921	gnl1	99	59.774	ENSMLEG00000030252	GNL1	90	62.659	Mandrillus_leucophaeus
ENSSFOG00015013921	gnl1	100	73.701	ENSMAMG00000003554	gnl1	100	71.336	Mastacembelus_armatus
ENSSFOG00015013921	gnl1	100	74.715	ENSMZEG00005018216	gnl1	100	72.340	Maylandia_zebra
ENSSFOG00015013921	gnl1	99	58.937	ENSMAUG00000015596	Gnl1	89	61.749	Mesocricetus_auratus
ENSSFOG00015013921	gnl1	99	59.774	ENSMICG00000014708	GNL1	90	62.659	Microcebus_murinus
ENSSFOG00015013921	gnl1	99	60.097	ENSMOCG00000020934	Gnl1	90	62.842	Microtus_ochrogaster
ENSSFOG00015013921	gnl1	100	73.083	ENSMMOG00000015833	gnl1	100	71.358	Mola_mola
ENSSFOG00015013921	gnl1	88	63.187	ENSMODG00000015964	GNL1	86	63.934	Monodelphis_domestica
ENSSFOG00015013921	gnl1	100	72.168	ENSMALG00000022523	gnl1	100	70.569	Monopterus_albus
ENSSFOG00015013921	gnl1	88	62.271	MGP_CAROLIEiJ_G0021547	Gnl1	90	62.842	Mus_caroli
ENSSFOG00015013921	gnl1	99	60.097	ENSMUSG00000024429	Gnl1	90	63.024	Mus_musculus
ENSSFOG00015013921	gnl1	99	59.935	MGP_PahariEiJ_G0020539	Gnl1	90	62.842	Mus_pahari
ENSSFOG00015013921	gnl1	99	59.935	MGP_SPRETEiJ_G0022452	Gnl1	90	62.842	Mus_spretus
ENSSFOG00015013921	gnl1	96	57.746	ENSMPUG00000011828	GNL1	69	61.776	Mustela_putorius_furo
ENSSFOG00015013921	gnl1	96	57.443	ENSMLUG00000008722	GNL1	85	61.240	Myotis_lucifugus
ENSSFOG00015013921	gnl1	99	58.643	ENSNGAG00000000745	Gnl1	90	62.295	Nannospalax_galili
ENSSFOG00015013921	gnl1	100	74.388	ENSNBRG00000020813	gnl1	100	72.177	Neolamprologus_brichardi
ENSSFOG00015013921	gnl1	88	58.942	ENSNLEG00000005058	GNL1	78	59.528	Nomascus_leucogenys
ENSSFOG00015013921	gnl1	91	59.519	ENSOPRG00000000007	GNL1	88	62.232	Ochotona_princeps
ENSSFOG00015013921	gnl1	99	57.997	ENSODEG00000018111	GNL1	90	61.091	Octodon_degus
ENSSFOG00015013921	gnl1	100	74.715	ENSONIG00000013044	gnl1	100	72.340	Oreochromis_niloticus
ENSSFOG00015013921	gnl1	99	57.674	ENSOCUG00000002110	GNL1	90	60.219	Oryctolagus_cuniculus
ENSSFOG00015013921	gnl1	89	73.675	ENSORLG00000012862	gnl1	88	74.212	Oryzias_latipes
ENSSFOG00015013921	gnl1	89	73.675	ENSORLG00020003923	gnl1	88	74.212	Oryzias_latipes_hni
ENSSFOG00015013921	gnl1	89	73.492	ENSORLG00015009552	gnl1	88	74.026	Oryzias_latipes_hsok
ENSSFOG00015013921	gnl1	100	71.824	ENSOMEG00000014409	gnl1	100	68.921	Oryzias_melastigma
ENSSFOG00015013921	gnl1	99	60.097	ENSOGAG00000004428	-	90	63.024	Otolemur_garnettii
ENSSFOG00015013921	gnl1	94	58.803	ENSOGAG00000024106	-	92	60.364	Otolemur_garnettii
ENSSFOG00015013921	gnl1	99	59.206	ENSOARG00000012966	GNL1	90	61.400	Ovis_aries
ENSSFOG00015013921	gnl1	99	59.451	ENSPPAG00000044009	GNL1	90	62.842	Pan_paniscus
ENSSFOG00015013921	gnl1	99	59.612	ENSPPRG00000007039	GNL1	90	62.477	Panthera_pardus
ENSSFOG00015013921	gnl1	99	59.451	ENSPTIG00000011307	GNL1	90	62.295	Panthera_tigris_altaica
ENSSFOG00015013921	gnl1	88	62.088	ENSPTRG00000017928	GNL1	90	62.432	Pan_troglodytes
ENSSFOG00015013921	gnl1	99	59.774	ENSPANG00000020097	GNL1	90	62.659	Papio_anubis
ENSSFOG00015013921	gnl1	100	77.100	ENSPKIG00000002200	gnl1	100	74.135	Paramormyrops_kingsleyae
ENSSFOG00015013921	gnl1	82	53.101	ENSPSIG00000008441	GNL1	87	53.488	Pelodiscus_sinensis
ENSSFOG00015013921	gnl1	88	75.138	ENSPMGG00000007259	gnl1	90	75.506	Periophthalmus_magnuspinnatus
ENSSFOG00015013921	gnl1	96	58.127	ENSPEMG00000002731	Gnl1	87	61.822	Peromyscus_maniculatus_bairdii
ENSSFOG00015013921	gnl1	88	63.486	ENSPCIG00000014975	GNL1	90	64.051	Phascolarctos_cinereus
ENSSFOG00015013921	gnl1	100	70.740	ENSPFOG00000015398	gnl1	89	76.015	Poecilia_formosa
ENSSFOG00015013921	gnl1	89	76.277	ENSPLAG00000003231	gnl1	88	76.384	Poecilia_latipinna
ENSSFOG00015013921	gnl1	100	70.740	ENSPMEG00000005001	gnl1	89	76.015	Poecilia_mexicana
ENSSFOG00015013921	gnl1	100	71.778	ENSPREG00000012818	gnl1	89	76.015	Poecilia_reticulata
ENSSFOG00015013921	gnl1	99	59.935	ENSPPYG00000016408	GNL1	90	62.842	Pongo_abelii
ENSSFOG00015013921	gnl1	55	68.116	ENSPCAG00000004522	-	70	68.116	Procavia_capensis
ENSSFOG00015013921	gnl1	99	59.935	ENSPCOG00000015669	GNL1	90	62.842	Propithecus_coquereli
ENSSFOG00015013921	gnl1	99	59.355	ENSPVAG00000003970	GNL1	89	62.477	Pteropus_vampyrus
ENSSFOG00015013921	gnl1	100	74.551	ENSPNYG00000022614	gnl1	100	72.177	Pundamilia_nyererei
ENSSFOG00015013921	gnl1	100	71.173	ENSPNAG00000021257	gnl1	100	71.664	Pygocentrus_nattereri
ENSSFOG00015013921	gnl1	99	59.451	ENSRNOG00000000798	Gnl1	87	69.892	Rattus_norvegicus
ENSSFOG00015013921	gnl1	99	59.774	ENSRBIG00000019143	GNL1	90	62.659	Rhinopithecus_bieti
ENSSFOG00015013921	gnl1	99	59.774	ENSRROG00000030029	GNL1	90	62.659	Rhinopithecus_roxellana
ENSSFOG00015013921	gnl1	99	59.935	ENSSBOG00000031909	GNL1	90	62.842	Saimiri_boliviensis_boliviensis
ENSSFOG00015013921	gnl1	99	58.065	ENSSHAG00000007557	GNL1	90	61.861	Sarcophilus_harrisii
ENSSFOG00015013921	gnl1	100	70.400	ENSSMAG00000010147	gnl1	100	69.431	Scophthalmus_maximus
ENSSFOG00015013921	gnl1	100	74.188	ENSSDUG00000013824	gnl1	100	71.661	Seriola_dumerili
ENSSFOG00015013921	gnl1	100	74.188	ENSSLDG00000024560	gnl1	100	71.661	Seriola_lalandi_dorsalis
ENSSFOG00015013921	gnl1	60	62.948	ENSSARG00000006156	-	69	71.348	Sorex_araneus
ENSSFOG00015013921	gnl1	89	63.587	ENSSPUG00000015374	GNL1	88	64.051	Sphenodon_punctatus
ENSSFOG00015013921	gnl1	100	72.890	ENSSPAG00000017541	gnl1	100	71.336	Stegastes_partitus
ENSSFOG00015013921	gnl1	99	59.774	ENSSSCG00000001372	GNL1	97	63.011	Sus_scrofa
ENSSFOG00015013921	gnl1	100	66.830	ENSTRUG00000011226	gnl1	92	66.612	Takifugu_rubripes
ENSSFOG00015013921	gnl1	99	67.045	ENSTNIG00000008017	gnl1	100	66.341	Tetraodon_nigroviridis
ENSSFOG00015013921	gnl1	99	55.412	ENSTBEG00000007538	GNL1	89	57.741	Tupaia_belangeri
ENSSFOG00015013921	gnl1	99	59.385	ENSTTRG00000008287	GNL1	90	62.226	Tursiops_truncatus
ENSSFOG00015013921	gnl1	99	59.289	ENSUAMG00000007671	GNL1	90	62.113	Ursus_americanus
ENSSFOG00015013921	gnl1	99	56.019	ENSUMAG00000018935	GNL1	88	60.894	Ursus_maritimus
ENSSFOG00015013921	gnl1	99	59.289	ENSVVUG00000009537	GNL1	90	62.295	Vulpes_vulpes
ENSSFOG00015013921	gnl1	87	60.256	ENSXETG00000024087	gnl1	90	60.256	Xenopus_tropicalis
ENSSFOG00015013921	gnl1	100	70.418	ENSXCOG00000019185	gnl1	89	75.646	Xiphophorus_couchianus
ENSSFOG00015013921	gnl1	100	70.418	ENSXMAG00000011015	gnl1	89	75.646	Xiphophorus_maculatus