EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014004 (Gene tree)
Gene ID: 108933446
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5570 bases
Position: chrKV411026.1:3140347-3145916
Accession: 108933446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021761	RRM_1	PF00076.22	8.4e-21	1	1
ENSSFOP00015021732	RRM_1	PF00076.22	9.3e-21	1	1
ENSSFOP00015021739	RRM_1	PF00076.22	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022003	-	813	-	ENSSFOP00015021761	270 (aa)	-	-
ENSSFOT00015021974	-	1667	XM_018750527	ENSSFOP00015021732	290 (aa)	XP_018606043	A0A1W4ZQT6
ENSSFOT00015021981	-	1688	-	ENSSFOP00015021739	307 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015014004's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014004	tra2a	57	67.630	ENSSFOG00015013018	-	57	77.160
ENSSFOG00015014004	tra2a	64	69.634	ENSSFOG00015007738	tra2b	62	75.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014004	tra2a	90	74.908	ENSG00000164548	TRA2A	90	80.237	Homo_sapiens
ENSSFOG00015014004	tra2a	90	81.203	ENSAPOG00000017425	tra2a	90	82.707	Acanthochromis_polyacanthus
ENSSFOG00015014004	tra2a	86	75.194	ENSAMEG00000003501	TRA2A	51	83.735	Ailuropoda_melanoleuca
ENSSFOG00015014004	tra2a	60	83.978	ENSACIG00000001333	tra2a	79	90.411	Amphilophus_citrinellus
ENSSFOG00015014004	tra2a	90	80.899	ENSAOCG00000015445	tra2a	90	82.397	Amphiprion_ocellaris
ENSSFOG00015014004	tra2a	90	80.899	ENSAPEG00000018557	tra2a	90	82.397	Amphiprion_percula
ENSSFOG00015014004	tra2a	90	79.779	ENSATEG00000000671	tra2a	90	81.250	Anabas_testudineus
ENSSFOG00015014004	tra2a	86	76.772	ENSAPLG00000013689	TRA2A	90	83.475	Anas_platyrhynchos
ENSSFOG00015014004	tra2a	90	77.528	ENSACAG00000013502	TRA2A	90	82.869	Anolis_carolinensis
ENSSFOG00015014004	tra2a	79	60.159	ENSANAG00000035184	TRA2A	82	69.892	Aotus_nancymaae
ENSSFOG00015014004	tra2a	90	81.111	ENSACLG00000024845	tra2a	90	82.593	Astatotilapia_calliptera
ENSSFOG00015014004	tra2a	79	77.489	ENSAMXG00000005553	tra2a	98	87.190	Astyanax_mexicanus
ENSSFOG00015014004	tra2a	90	75.185	ENSBTAG00000012622	TRA2A	90	80.556	Bos_taurus
ENSSFOG00015014004	tra2a	90	74.908	ENSCJAG00000001509	-	90	80.237	Callithrix_jacchus
ENSSFOG00015014004	tra2a	94	74.468	ENSCJAG00000045802	-	96	78.968	Callithrix_jacchus
ENSSFOG00015014004	tra2a	90	75.185	ENSCAFG00000002788	TRA2A	91	80.556	Canis_familiaris
ENSSFOG00015014004	tra2a	61	75.543	ENSCAFG00020002745	TRA2A	63	83.735	Canis_lupus_dingo
ENSSFOG00015014004	tra2a	90	74.908	ENSTSYG00000000388	TRA2A	90	80.237	Carlito_syrichta
ENSSFOG00015014004	tra2a	86	63.077	ENSCAPG00000017377	TRA2A	58	64.671	Cavia_aperea
ENSSFOG00015014004	tra2a	90	74.908	ENSCPOG00000010739	TRA2A	90	80.237	Cavia_porcellus
ENSSFOG00015014004	tra2a	90	74.908	ENSCCAG00000019576	TRA2A	90	80.237	Cebus_capucinus
ENSSFOG00015014004	tra2a	90	74.908	ENSCATG00000041219	TRA2A	90	80.237	Cercocebus_atys
ENSSFOG00015014004	tra2a	90	74.908	ENSCLAG00000007917	TRA2A	90	80.237	Chinchilla_lanigera
ENSSFOG00015014004	tra2a	90	74.908	ENSCSAG00000014051	TRA2A	90	80.237	Chlorocebus_sabaeus
ENSSFOG00015014004	tra2a	90	74.539	ENSCHOG00000001130	TRA2A	90	79.842	Choloepus_hoffmanni
ENSSFOG00015014004	tra2a	90	74.908	ENSCPBG00000022466	TRA2A	90	80.632	Chrysemys_picta_bellii
ENSSFOG00015014004	tra2a	90	74.908	ENSCANG00000031292	TRA2A	90	80.237	Colobus_angolensis_palliatus
ENSSFOG00015014004	tra2a	90	75.646	ENSCGRG00001019980	Tra2a	90	81.028	Cricetulus_griseus_chok1gshd
ENSSFOG00015014004	tra2a	86	76.062	ENSCGRG00000006087	Tra2a	89	81.743	Cricetulus_griseus_crigri
ENSSFOG00015014004	tra2a	90	73.723	ENSCSEG00000012193	tra2a	90	74.088	Cynoglossus_semilaevis
ENSSFOG00015014004	tra2a	90	83.146	ENSDARG00000007863	tra2a	90	83.146	Danio_rerio
ENSSFOG00015014004	tra2a	90	75.277	ENSDNOG00000039446	TRA2A	90	80.237	Dasypus_novemcinctus
ENSSFOG00015014004	tra2a	90	76.208	ENSDORG00000009361	Tra2a	90	81.673	Dipodomys_ordii
ENSSFOG00015014004	tra2a	61	73.684	ENSETEG00000007250	TRA2A	60	81.395	Echinops_telfairi
ENSSFOG00015014004	tra2a	90	75.185	ENSEASG00005022002	TRA2A	90	80.556	Equus_asinus_asinus
ENSSFOG00015014004	tra2a	90	75.185	ENSECAG00000011508	TRA2A	90	80.556	Equus_caballus
ENSSFOG00015014004	tra2a	90	74.908	ENSEEUG00000015674	TRA2A	90	80.237	Erinaceus_europaeus
ENSSFOG00015014004	tra2a	80	83.544	ENSELUG00000005846	tra2a	91	73.826	Esox_lucius
ENSSFOG00015014004	tra2a	90	75.185	ENSFCAG00000005361	TRA2A	90	80.556	Felis_catus
ENSSFOG00015014004	tra2a	86	77.778	ENSFALG00000009605	TRA2A	89	84.615	Ficedula_albicollis
ENSSFOG00015014004	tra2a	90	74.265	ENSFDAG00000004949	TRA2A	90	79.528	Fukomys_damarensis
ENSSFOG00015014004	tra2a	90	72.202	ENSGMOG00000013740	tra2a	91	71.480	Gadus_morhua
ENSSFOG00015014004	tra2a	90	76.316	ENSGALG00000010973	TRA2A	90	82.661	Gallus_gallus
ENSSFOG00015014004	tra2a	90	79.848	ENSGACG00000006878	tra2a	90	76.046	Gasterosteus_aculeatus
ENSSFOG00015014004	tra2a	90	75.465	ENSGAGG00000005793	TRA2A	90	81.275	Gopherus_agassizii
ENSSFOG00015014004	tra2a	90	74.908	ENSGGOG00000009053	TRA2A	90	80.237	Gorilla_gorilla
ENSSFOG00015014004	tra2a	90	80.741	ENSHBUG00000018234	tra2a	90	82.222	Haplochromis_burtoni
ENSSFOG00015014004	tra2a	90	74.908	ENSHGLG00000012168	TRA2A	90	80.237	Heterocephalus_glaber_female
ENSSFOG00015014004	tra2a	90	74.908	ENSHGLG00100014577	TRA2A	90	80.237	Heterocephalus_glaber_male
ENSSFOG00015014004	tra2a	66	62.245	ENSHCOG00000006320	tra2a	52	64.423	Hippocampus_comes
ENSSFOG00015014004	tra2a	56	64.444	ENSHCOG00000006314	tra2a	80	62.500	Hippocampus_comes
ENSSFOG00015014004	tra2a	90	74.908	ENSSTOG00000012073	TRA2A	90	80.237	Ictidomys_tridecemlineatus
ENSSFOG00015014004	tra2a	90	76.208	ENSJJAG00000022787	Tra2a	90	81.673	Jaculus_jaculus
ENSSFOG00015014004	tra2a	85	73.764	ENSLBEG00000005297	tra2a	63	77.128	Labrus_bergylta
ENSSFOG00015014004	tra2a	90	78.626	ENSLACG00000014765	TRA2A	90	79.389	Latimeria_chalumnae
ENSSFOG00015014004	tra2a	70	58.515	ENSLOCG00000009558	-	58	72.832	Lepisosteus_oculatus
ENSSFOG00015014004	tra2a	90	90.076	ENSLOCG00000011615	-	90	92.748	Lepisosteus_oculatus
ENSSFOG00015014004	tra2a	90	74.632	ENSLAFG00000006598	TRA2A	90	79.921	Loxodonta_africana
ENSSFOG00015014004	tra2a	90	74.908	ENSMFAG00000043211	TRA2A	90	80.237	Macaca_fascicularis
ENSSFOG00015014004	tra2a	90	74.908	ENSMMUG00000006286	TRA2A	90	80.237	Macaca_mulatta
ENSSFOG00015014004	tra2a	90	74.908	ENSMNEG00000040670	TRA2A	90	80.237	Macaca_nemestrina
ENSSFOG00015014004	tra2a	90	74.908	ENSMLEG00000032154	TRA2A	90	80.237	Mandrillus_leucophaeus
ENSSFOG00015014004	tra2a	80	80.085	ENSMAMG00000008575	tra2a	91	84.034	Mastacembelus_armatus
ENSSFOG00015014004	tra2a	90	81.111	ENSMZEG00005009142	tra2a	90	82.593	Maylandia_zebra
ENSSFOG00015014004	tra2a	86	76.772	ENSMGAG00000010514	TRA2A	89	83.475	Meleagris_gallopavo
ENSSFOG00015014004	tra2a	100	66.667	ENSMICG00000036849	-	88	69.547	Microcebus_murinus
ENSSFOG00015014004	tra2a	90	75.277	ENSMICG00000043639	-	90	80.632	Microcebus_murinus
ENSSFOG00015014004	tra2a	69	75.532	ENSMOCG00000006467	-	98	72.000	Microtus_ochrogaster
ENSSFOG00015014004	tra2a	69	75.369	ENSMOCG00000010249	-	63	83.230	Microtus_ochrogaster
ENSSFOG00015014004	tra2a	88	78.378	ENSMMOG00000020174	tra2a	73	82.692	Mola_mola
ENSSFOG00015014004	tra2a	90	75.646	ENSMODG00000000807	TRA2A	90	81.028	Monodelphis_domestica
ENSSFOG00015014004	tra2a	79	82.553	ENSMALG00000020875	tra2a	90	77.174	Monopterus_albus
ENSSFOG00015014004	tra2a	90	75.646	ENSMUSG00000029817	Tra2a	90	81.028	Mus_musculus
ENSSFOG00015014004	tra2a	90	75.277	MGP_PahariEiJ_G0022115	Tra2a	90	80.632	Mus_pahari
ENSSFOG00015014004	tra2a	90	75.646	MGP_SPRETEiJ_G0029368	Tra2a	90	81.028	Mus_spretus
ENSSFOG00015014004	tra2a	90	75.185	ENSMPUG00000013480	TRA2A	90	80.556	Mustela_putorius_furo
ENSSFOG00015014004	tra2a	90	74.265	ENSMLUG00000013972	TRA2A	90	79.134	Myotis_lucifugus
ENSSFOG00015014004	tra2a	90	76.208	ENSNGAG00000023805	Tra2a	90	81.673	Nannospalax_galili
ENSSFOG00015014004	tra2a	56	77.647	ENSNBRG00000005992	tra2a	73	86.184	Neolamprologus_brichardi
ENSSFOG00015014004	tra2a	90	74.908	ENSNLEG00000014794	TRA2A	90	80.237	Nomascus_leucogenys
ENSSFOG00015014004	tra2a	66	57.789	ENSNLEG00000029659	-	88	67.550	Nomascus_leucogenys
ENSSFOG00015014004	tra2a	90	76.015	ENSMEUG00000001202	TRA2A	90	77.075	Notamacropus_eugenii
ENSSFOG00015014004	tra2a	90	74.539	ENSOPRG00000007606	TRA2A	90	79.842	Ochotona_princeps
ENSSFOG00015014004	tra2a	90	74.908	ENSODEG00000008335	TRA2A	90	80.237	Octodon_degus
ENSSFOG00015014004	tra2a	90	80.741	ENSONIG00000004503	tra2a	90	82.222	Oreochromis_niloticus
ENSSFOG00015014004	tra2a	89	73.188	ENSOANG00000014202	TRA2A	90	77.907	Ornithorhynchus_anatinus
ENSSFOG00015014004	tra2a	90	74.539	ENSOCUG00000024139	TRA2A	90	79.842	Oryctolagus_cuniculus
ENSSFOG00015014004	tra2a	90	62.030	ENSORLG00000022191	tra2a	61	75.000	Oryzias_latipes
ENSSFOG00015014004	tra2a	90	62.264	ENSORLG00020003490	tra2a	61	75.460	Oryzias_latipes_hni
ENSSFOG00015014004	tra2a	90	61.887	ENSORLG00015015485	tra2a	61	74.847	Oryzias_latipes_hsok
ENSSFOG00015014004	tra2a	90	62.692	ENSOMEG00000017864	tra2a	60	75.949	Oryzias_melastigma
ENSSFOG00015014004	tra2a	89	73.606	ENSOGAG00000009733	TRA2A	59	83.234	Otolemur_garnettii
ENSSFOG00015014004	tra2a	90	68.750	ENSOARG00000002323	-	89	72.835	Ovis_aries
ENSSFOG00015014004	tra2a	90	75.556	ENSOARG00000013147	TRA2A	90	80.556	Ovis_aries
ENSSFOG00015014004	tra2a	90	74.908	ENSPPAG00000034382	TRA2A	90	80.237	Pan_paniscus
ENSSFOG00015014004	tra2a	90	75.185	ENSPPRG00000015216	TRA2A	90	80.556	Panthera_pardus
ENSSFOG00015014004	tra2a	90	75.185	ENSPTIG00000021114	TRA2A	90	80.556	Panthera_tigris_altaica
ENSSFOG00015014004	tra2a	90	74.908	ENSPTRG00000046098	-	90	80.237	Pan_troglodytes
ENSSFOG00015014004	tra2a	91	75.182	ENSPTRG00000018988	TRA2A	91	80.237	Pan_troglodytes
ENSSFOG00015014004	tra2a	90	74.908	ENSPANG00000014541	TRA2A	90	80.237	Papio_anubis
ENSSFOG00015014004	tra2a	90	92.720	ENSPKIG00000012298	tra2a	90	92.720	Paramormyrops_kingsleyae
ENSSFOG00015014004	tra2a	88	74.532	ENSPSIG00000014993	TRA2A	90	80.321	Pelodiscus_sinensis
ENSSFOG00015014004	tra2a	90	75.926	ENSPEMG00000008564	-	90	81.349	Peromyscus_maniculatus_bairdii
ENSSFOG00015014004	tra2a	64	64.398	ENSPMAG00000007947	tra2a	57	71.975	Petromyzon_marinus
ENSSFOG00015014004	tra2a	90	76.384	ENSPCIG00000007917	TRA2A	90	81.818	Phascolarctos_cinereus
ENSSFOG00015014004	tra2a	90	74.908	ENSPPYG00000017728	TRA2A	90	80.237	Pongo_abelii
ENSSFOG00015014004	tra2a	90	75.000	ENSPCAG00000004148	TRA2A	91	79.921	Procavia_capensis
ENSSFOG00015014004	tra2a	90	63.498	ENSPCOG00000020465	TRA2A	88	68.163	Propithecus_coquereli
ENSSFOG00015014004	tra2a	90	74.265	ENSPVAG00000011298	TRA2A	90	79.528	Pteropus_vampyrus
ENSSFOG00015014004	tra2a	60	82.514	ENSPNYG00000020134	tra2a	76	84.516	Pundamilia_nyererei
ENSSFOG00015014004	tra2a	90	85.824	ENSPNAG00000000482	tra2a	90	82.759	Pygocentrus_nattereri
ENSSFOG00015014004	tra2a	90	75.646	ENSRNOG00000009156	Tra2a	90	81.028	Rattus_norvegicus
ENSSFOG00015014004	tra2a	50	80.690	ENSRBIG00000036805	TRA2A	66	92.126	Rhinopithecus_bieti
ENSSFOG00015014004	tra2a	90	74.908	ENSRROG00000030758	TRA2A	90	80.237	Rhinopithecus_roxellana
ENSSFOG00015014004	tra2a	90	74.908	ENSSBOG00000031562	TRA2A	90	80.237	Saimiri_boliviensis_boliviensis
ENSSFOG00015014004	tra2a	89	74.627	ENSSHAG00000005727	TRA2A	88	80.000	Sarcophilus_harrisii
ENSSFOG00015014004	tra2a	93	77.899	ENSSMAG00000014242	tra2a	90	80.075	Scophthalmus_maximus
ENSSFOG00015014004	tra2a	90	80.797	ENSSDUG00000005610	tra2a	89	85.490	Seriola_dumerili
ENSSFOG00015014004	tra2a	56	79.167	ENSSLDG00000025577	tra2a	81	91.333	Seriola_lalandi_dorsalis
ENSSFOG00015014004	tra2a	66	73.438	ENSSARG00000012900	TRA2A	62	73.438	Sorex_araneus
ENSSFOG00015014004	tra2a	90	73.551	ENSSPUG00000006143	TRA2A	90	79.070	Sphenodon_punctatus
ENSSFOG00015014004	tra2a	90	80.882	ENSSPAG00000004184	tra2a	90	82.353	Stegastes_partitus
ENSSFOG00015014004	tra2a	90	75.185	ENSSSCG00000015387	TRA2A	90	80.556	Sus_scrofa
ENSSFOG00015014004	tra2a	62	78.453	ENSTGUG00000002795	TRA2A	62	86.792	Taeniopygia_guttata
ENSSFOG00015014004	tra2a	72	87.113	ENSTBEG00000013773	TRA2A	75	86.256	Tupaia_belangeri
ENSSFOG00015014004	tra2a	90	74.815	ENSTTRG00000008922	TRA2A	90	80.159	Tursiops_truncatus
ENSSFOG00015014004	tra2a	56	75.439	ENSUMAG00000001181	TRA2A	79	84.314	Ursus_maritimus
ENSSFOG00015014004	tra2a	66	74.093	ENSVPAG00000001829	TRA2A	90	65.476	Vicugna_pacos
ENSSFOG00015014004	tra2a	90	75.185	ENSVVUG00000001045	TRA2A	90	80.556	Vulpes_vulpes
ENSSFOG00015014004	tra2a	61	73.404	ENSXETG00000007397	tra2a	59	81.176	Xenopus_tropicalis