EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014010 (Gene tree)
Gene ID: 108939728
Gene Symbol: sar1a
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6627 bases
Position: chrKV411190.1:5025578-5032204
Accession: 108939728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021756	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSFOP00015021765	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015021998	-	4100	XM_018761305	ENSSFOP00015021756	198 (aa)	XP_018616821	A0A1W5AVA3
ENSSFOT00015022008	-	803	XM_018761304	ENSSFOP00015021765	209 (aa)	XP_018616820	-

Gene Model

Click here to download ENSSFOG00015014010's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014010	sar1a	52	32.353	ENSSFOG00015008219	arl2	73	33.913
ENSSFOG00015014010	sar1a	92	31.720	ENSSFOG00015007701	-	94	31.720
ENSSFOG00015014010	sar1a	92	30.978	ENSSFOG00015001665	arl1	94	30.978
ENSSFOG00015014010	sar1a	100	90.909	ENSSFOG00015020051	sar1b	100	90.909
ENSSFOG00015014010	sar1a	86	32.203	ENSSFOG00015023057	arl13b	66	32.203
ENSSFOG00015014010	sar1a	87	31.395	ENSSFOG00015020707	ARF5	89	31.395
ENSSFOG00015014010	sar1a	64	32.812	ENSSFOG00015020131	arl8bb	73	32.812
ENSSFOG00015014010	sar1a	61	36.066	ENSSFOG00015001190	arl11	69	36.066
ENSSFOG00015014010	sar1a	66	33.333	ENSSFOG00015009538	arf1	76	33.333
ENSSFOG00015014010	sar1a	65	34.375	ENSSFOG00015015338	-	73	34.375
ENSSFOG00015014010	sar1a	96	31.414	ENSSFOG00015022345	-	96	31.414
ENSSFOG00015014010	sar1a	66	33.094	ENSSFOG00015004387	-	77	33.094
ENSSFOG00015014010	sar1a	64	32.031	ENSSFOG00015019411	arl8ba	69	32.031
ENSSFOG00015014010	sar1a	64	33.588	ENSSFOG00015020603	arl4aa	66	33.588
ENSSFOG00015014010	sar1a	72	32.432	ENSSFOG00015018615	ARL4C	73	32.432
ENSSFOG00015014010	sar1a	100	90.404	ENSSFOG00015018128	-	100	90.404
ENSSFOG00015014010	sar1a	72	32.168	ENSSFOG00015004822	arf3a	78	32.168
ENSSFOG00015014010	sar1a	70	31.507	ENSSFOG00015023529	arl5c	80	33.088
ENSSFOG00015014010	sar1a	67	33.813	ENSSFOG00015015390	ARL4A	71	34.043
ENSSFOG00015014010	sar1a	66	33.333	ENSSFOG00015021396	-	76	33.333
ENSSFOG00015014010	sar1a	64	32.031	ENSSFOG00015021537	arl8a	69	32.031
ENSSFOG00015014010	sar1a	72	32.168	ENSSFOG00015015116	arf3	78	32.168
ENSSFOG00015014010	sar1a	94	30.000	ENSSFOG00015023135	arl6	96	30.000
ENSSFOG00015014010	sar1a	72	32.432	ENSSFOG00015007064	arl4cb	72	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014010	sar1a	100	85.354	ENSACIG00000019827	sar1ab	100	85.354	Amphilophus_citrinellus
ENSSFOG00015014010	sar1a	100	87.374	ENSAOCG00000022062	sar1ab	100	87.374	Amphiprion_ocellaris
ENSSFOG00015014010	sar1a	100	87.374	ENSAPEG00000011525	sar1ab	100	87.374	Amphiprion_percula
ENSSFOG00015014010	sar1a	100	90.404	ENSATEG00000003466	sar1ab	100	90.404	Anabas_testudineus
ENSSFOG00015014010	sar1a	100	82.828	ENSACLG00000013053	sar1ab	100	82.828	Astatotilapia_calliptera
ENSSFOG00015014010	sar1a	100	88.384	ENSCSEG00000004825	sar1ab	100	88.384	Cynoglossus_semilaevis
ENSSFOG00015014010	sar1a	100	85.354	ENSCVAG00000006500	-	100	85.354	Cyprinodon_variegatus
ENSSFOG00015014010	sar1a	100	84.848	ENSCVAG00000015162	sar1ab	100	84.848	Cyprinodon_variegatus
ENSSFOG00015014010	sar1a	100	90.404	ENSDARG00000033320	sar1ab	100	90.404	Danio_rerio
ENSSFOG00015014010	sar1a	100	88.889	ENSELUG00000024279	sar1ab	100	88.889	Esox_lucius
ENSSFOG00015014010	sar1a	100	90.404	ENSELUG00000013652	sar1a	100	90.404	Esox_lucius
ENSSFOG00015014010	sar1a	100	84.343	ENSFHEG00000021773	sar1ab	100	84.343	Fundulus_heteroclitus
ENSSFOG00015014010	sar1a	100	86.869	ENSFHEG00000012352	-	100	86.869	Fundulus_heteroclitus
ENSSFOG00015014010	sar1a	100	85.354	ENSGMOG00000012588	sar1ab	100	85.354	Gadus_morhua
ENSSFOG00015014010	sar1a	100	86.364	ENSGAFG00000004846	-	100	86.364	Gambusia_affinis
ENSSFOG00015014010	sar1a	100	86.364	ENSGAFG00000009702	sar1ab	100	86.364	Gambusia_affinis
ENSSFOG00015014010	sar1a	100	89.899	ENSGACG00000008616	sar1ab	100	89.899	Gasterosteus_aculeatus
ENSSFOG00015014010	sar1a	100	82.828	ENSHBUG00000021221	sar1ab	100	82.828	Haplochromis_burtoni
ENSSFOG00015014010	sar1a	100	88.384	ENSHCOG00000002845	sar1ab	80	88.384	Hippocampus_comes
ENSSFOG00015014010	sar1a	100	86.364	ENSKMAG00000018006	sar1ab	100	86.364	Kryptolebias_marmoratus
ENSSFOG00015014010	sar1a	100	89.899	ENSLBEG00000001114	sar1ab	100	89.899	Labrus_bergylta
ENSSFOG00015014010	sar1a	100	89.394	ENSMAMG00000021314	sar1ab	100	89.394	Mastacembelus_armatus
ENSSFOG00015014010	sar1a	100	82.828	ENSMZEG00005027606	sar1ab	100	82.828	Maylandia_zebra
ENSSFOG00015014010	sar1a	100	88.889	ENSMMOG00000010360	sar1ab	100	88.889	Mola_mola
ENSSFOG00015014010	sar1a	100	88.384	ENSMALG00000005831	sar1ab	100	88.384	Monopterus_albus
ENSSFOG00015014010	sar1a	100	83.333	ENSNBRG00000018772	sar1ab	100	83.333	Neolamprologus_brichardi
ENSSFOG00015014010	sar1a	100	84.343	ENSONIG00000018509	sar1ab	100	84.343	Oreochromis_niloticus
ENSSFOG00015014010	sar1a	100	86.869	ENSORLG00000006779	sar1ab	67	86.869	Oryzias_latipes
ENSSFOG00015014010	sar1a	100	88.889	ENSORLG00000009132	-	90	88.889	Oryzias_latipes
ENSSFOG00015014010	sar1a	100	88.889	ENSORLG00020007024	-	90	88.889	Oryzias_latipes_hni
ENSSFOG00015014010	sar1a	100	87.374	ENSORLG00020005458	sar1ab	100	87.374	Oryzias_latipes_hni
ENSSFOG00015014010	sar1a	100	88.384	ENSORLG00015006223	-	94	95.536	Oryzias_latipes_hsok
ENSSFOG00015014010	sar1a	100	86.869	ENSORLG00015010542	sar1ab	100	86.869	Oryzias_latipes_hsok
ENSSFOG00015014010	sar1a	100	87.374	ENSOMEG00000004948	sar1ab	100	87.374	Oryzias_melastigma
ENSSFOG00015014010	sar1a	100	88.384	ENSOMEG00000012020	-	100	88.384	Oryzias_melastigma
ENSSFOG00015014010	sar1a	100	93.939	ENSPKIG00000007615	sar1ab	100	93.939	Paramormyrops_kingsleyae
ENSSFOG00015014010	sar1a	100	90.404	ENSPMGG00000013330	sar1ab	100	90.404	Periophthalmus_magnuspinnatus
ENSSFOG00015014010	sar1a	100	86.364	ENSPFOG00000023432	sar1ab	100	86.364	Poecilia_formosa
ENSSFOG00015014010	sar1a	100	86.364	ENSPLAG00000023705	sar1ab	100	86.364	Poecilia_latipinna
ENSSFOG00015014010	sar1a	100	86.364	ENSPMEG00000000559	sar1ab	100	86.364	Poecilia_mexicana
ENSSFOG00015014010	sar1a	100	85.354	ENSPMEG00000001717	-	100	85.354	Poecilia_mexicana
ENSSFOG00015014010	sar1a	100	86.364	ENSPREG00000016098	sar1ab	100	86.364	Poecilia_reticulata
ENSSFOG00015014010	sar1a	100	83.333	ENSPNYG00000011603	sar1ab	100	83.333	Pundamilia_nyererei
ENSSFOG00015014010	sar1a	100	89.899	ENSPNAG00000008007	sar1ab	100	89.899	Pygocentrus_nattereri
ENSSFOG00015014010	sar1a	56	90.991	ENSSMAG00000020758	sar1ab	80	90.991	Scophthalmus_maximus
ENSSFOG00015014010	sar1a	100	89.394	ENSSDUG00000010773	sar1ab	100	89.394	Seriola_dumerili
ENSSFOG00015014010	sar1a	100	89.394	ENSSLDG00000025558	sar1ab	100	89.394	Seriola_lalandi_dorsalis
ENSSFOG00015014010	sar1a	100	88.384	ENSSPAG00000009194	sar1ab	100	88.384	Stegastes_partitus
ENSSFOG00015014010	sar1a	100	87.374	ENSTRUG00000007269	sar1ab	100	87.374	Takifugu_rubripes
ENSSFOG00015014010	sar1a	100	86.364	ENSTNIG00000008635	sar1ab	100	86.364	Tetraodon_nigroviridis
ENSSFOG00015014010	sar1a	100	86.869	ENSXMAG00000003130	sar1ab	100	86.869	Xiphophorus_maculatus
ENSSFOG00015014010	sar1a	100	86.364	ENSXMAG00000026223	SAR1A	100	86.364	Xiphophorus_maculatus