EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014064 (Gene tree)
Gene ID: 108919210
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11904 bases
Position: chrKV410803.1:2173559-2185462
Accession: 108919210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015021854	ResIII	PF04851.15	1.5e-06	1	1
ENSSFOP00015021891	ResIII	PF04851.15	2.6e-06	1	1
ENSSFOP00015021854	DEAD	PF00270.29	1.7e-48	1	1
ENSSFOP00015021891	DEAD	PF00270.29	1.7e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022100	-	4823	XM_018727059	ENSSFOP00015021854	932 (aa)	XP_018582575	-
ENSSFOT00015022137	-	2790	-	ENSSFOP00015021891	929 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015014064's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014064	ddx42	51	35.887	ENSSFOG00015012193	ddx43	77	35.887
ENSSFOG00015014064	ddx42	50	36.475	ENSSFOG00015022312	ddx3xa	70	36.660
ENSSFOG00015014064	ddx42	56	42.086	ENSSFOG00015020093	ddx46	52	43.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014064	ddx42	83	80.128	ENSG00000198231	DDX42	98	77.551	Homo_sapiens
ENSSFOG00015014064	ddx42	80	85.457	ENSAPOG00000017675	ddx42	84	89.720	Acanthochromis_polyacanthus
ENSSFOG00015014064	ddx42	83	80.438	ENSAMEG00000003200	DDX42	81	80.438	Ailuropoda_melanoleuca
ENSSFOG00015014064	ddx42	65	91.570	ENSACIG00000007376	ddx42	79	91.722	Amphilophus_citrinellus
ENSSFOG00015014064	ddx42	82	83.859	ENSAOCG00000003520	ddx42	81	89.720	Amphiprion_ocellaris
ENSSFOG00015014064	ddx42	82	84.091	ENSAPEG00000000984	ddx42	81	89.706	Amphiprion_percula
ENSSFOG00015014064	ddx42	80	83.867	ENSATEG00000022920	ddx42	83	87.435	Anabas_testudineus
ENSSFOG00015014064	ddx42	81	82.129	ENSAPLG00000010544	DDX42	81	81.997	Anas_platyrhynchos
ENSSFOG00015014064	ddx42	81	82.470	ENSACAG00000003994	DDX42	77	83.889	Anolis_carolinensis
ENSSFOG00015014064	ddx42	83	80.128	ENSANAG00000035693	DDX42	92	81.707	Aotus_nancymaae
ENSSFOG00015014064	ddx42	83	86.497	ENSACLG00000025113	ddx42	86	86.752	Astatotilapia_calliptera
ENSSFOG00015014064	ddx42	79	87.517	ENSAMXG00000011435	ddx42	82	86.340	Astyanax_mexicanus
ENSSFOG00015014064	ddx42	83	79.665	ENSBTAG00000021058	DDX42	89	81.011	Bos_taurus
ENSSFOG00015014064	ddx42	60	57.840	WBGene00008119	C46F11.4	85	50.356	Caenorhabditis_elegans
ENSSFOG00015014064	ddx42	83	80.566	ENSCJAG00000019649	DDX42	99	80.566	Callithrix_jacchus
ENSSFOG00015014064	ddx42	81	81.603	ENSCAFG00000012818	DDX42	81	81.603	Canis_familiaris
ENSSFOG00015014064	ddx42	81	81.735	ENSCAFG00020026631	DDX42	81	81.735	Canis_lupus_dingo
ENSSFOG00015014064	ddx42	83	80.695	ENSCHIG00000014431	DDX42	84	80.695	Capra_hircus
ENSSFOG00015014064	ddx42	83	80.359	ENSTSYG00000001380	DDX42	83	80.359	Carlito_syrichta
ENSSFOG00015014064	ddx42	67	65.267	ENSCAPG00000013621	DDX42	83	64.927	Cavia_aperea
ENSSFOG00015014064	ddx42	81	81.603	ENSCPOG00000005633	DDX42	83	79.846	Cavia_porcellus
ENSSFOG00015014064	ddx42	81	77.004	ENSCCAG00000020612	DDX42	88	83.830	Cebus_capucinus
ENSSFOG00015014064	ddx42	83	80.256	ENSCATG00000030490	DDX42	85	81.860	Cercocebus_atys
ENSSFOG00015014064	ddx42	81	81.866	ENSCLAG00000003497	DDX42	81	81.735	Chinchilla_lanigera
ENSSFOG00015014064	ddx42	83	76.178	ENSCSAG00000003914	DDX42	83	76.306	Chlorocebus_sabaeus
ENSSFOG00015014064	ddx42	61	88.462	ENSCHOG00000006241	DDX42	61	88.462	Choloepus_hoffmanni
ENSSFOG00015014064	ddx42	81	81.997	ENSCPBG00000026682	DDX42	80	82.260	Chrysemys_picta_bellii
ENSSFOG00015014064	ddx42	83	80.128	ENSCANG00000034663	DDX42	93	81.791	Colobus_angolensis_palliatus
ENSSFOG00015014064	ddx42	83	80.616	ENSCGRG00001009775	Ddx42	83	80.488	Cricetulus_griseus_chok1gshd
ENSSFOG00015014064	ddx42	83	80.616	ENSCGRG00000011718	Ddx42	83	80.488	Cricetulus_griseus_crigri
ENSSFOG00015014064	ddx42	83	85.123	ENSCSEG00000021574	ddx42	85	85.123	Cynoglossus_semilaevis
ENSSFOG00015014064	ddx42	80	86.364	ENSCVAG00000011404	ddx42	80	87.208	Cyprinodon_variegatus
ENSSFOG00015014064	ddx42	80	87.135	ENSDARG00000037928	ddx42	86	85.260	Danio_rerio
ENSSFOG00015014064	ddx42	82	78.831	ENSDNOG00000007961	DDX42	77	83.803	Dasypus_novemcinctus
ENSSFOG00015014064	ddx42	83	72.634	ENSDORG00000004199	Ddx42	83	71.520	Dipodomys_ordii
ENSSFOG00015014064	ddx42	66	61.874	FBgn0036104	CG6418	84	59.226	Drosophila_melanogaster
ENSSFOG00015014064	ddx42	80	74.206	ENSEBUG00000001155	ddx42	88	75.549	Eptatretus_burgeri
ENSSFOG00015014064	ddx42	81	81.735	ENSEASG00005013089	DDX42	90	83.489	Equus_asinus_asinus
ENSSFOG00015014064	ddx42	81	81.735	ENSECAG00000022684	DDX42	81	81.735	Equus_caballus
ENSSFOG00015014064	ddx42	58	94.286	ENSEEUG00000009144	DDX42	73	94.286	Erinaceus_europaeus
ENSSFOG00015014064	ddx42	83	84.143	ENSELUG00000020593	ddx42	84	85.038	Esox_lucius
ENSSFOG00015014064	ddx42	83	80.438	ENSFCAG00000003499	DDX42	82	80.438	Felis_catus
ENSSFOG00015014064	ddx42	83	80.903	ENSFALG00000004675	DDX42	68	80.774	Ficedula_albicollis
ENSSFOG00015014064	ddx42	81	81.866	ENSFDAG00000020516	DDX42	81	81.735	Fukomys_damarensis
ENSSFOG00015014064	ddx42	82	82.620	ENSFHEG00000023290	ddx42	80	87.345	Fundulus_heteroclitus
ENSSFOG00015014064	ddx42	76	81.241	ENSGMOG00000004595	ddx42	79	81.523	Gadus_morhua
ENSSFOG00015014064	ddx42	81	81.997	ENSGALG00000000581	DDX42	80	81.866	Gallus_gallus
ENSSFOG00015014064	ddx42	83	81.250	ENSGAFG00000011846	ddx42	80	87.345	Gambusia_affinis
ENSSFOG00015014064	ddx42	80	82.580	ENSGACG00000009782	ddx42	84	82.580	Gasterosteus_aculeatus
ENSSFOG00015014064	ddx42	81	81.997	ENSGAGG00000024411	DDX42	79	81.866	Gopherus_agassizii
ENSSFOG00015014064	ddx42	83	80.128	ENSGGOG00000006779	DDX42	91	81.707	Gorilla_gorilla
ENSSFOG00015014064	ddx42	83	86.497	ENSHBUG00000008705	ddx42	86	86.752	Haplochromis_burtoni
ENSSFOG00015014064	ddx42	81	77.398	ENSHGLG00000010024	DDX42	81	76.610	Heterocephalus_glaber_female
ENSSFOG00015014064	ddx42	81	81.866	ENSHGLG00100004479	-	81	81.735	Heterocephalus_glaber_male
ENSSFOG00015014064	ddx42	74	63.464	ENSHGLG00100007138	-	74	63.319	Heterocephalus_glaber_male
ENSSFOG00015014064	ddx42	81	84.371	ENSHCOG00000003357	ddx42	89	85.507	Hippocampus_comes
ENSSFOG00015014064	ddx42	83	85.006	ENSIPUG00000013327	ddx42	87	85.515	Ictalurus_punctatus
ENSSFOG00015014064	ddx42	81	81.603	ENSSTOG00000008922	DDX42	81	81.603	Ictidomys_tridecemlineatus
ENSSFOG00015014064	ddx42	82	81.627	ENSJJAG00000011727	Ddx42	82	81.627	Jaculus_jaculus
ENSSFOG00015014064	ddx42	82	86.180	ENSKMAG00000009914	ddx42	89	82.260	Kryptolebias_marmoratus
ENSSFOG00015014064	ddx42	83	79.082	ENSLBEG00000004687	ddx42	76	88.227	Labrus_bergylta
ENSSFOG00015014064	ddx42	80	82.329	ENSLACG00000013476	DDX42	78	82.806	Latimeria_chalumnae
ENSSFOG00015014064	ddx42	83	86.269	ENSLOCG00000011764	ddx42	84	86.399	Lepisosteus_oculatus
ENSSFOG00015014064	ddx42	81	81.997	ENSLAFG00000003249	DDX42	81	81.997	Loxodonta_africana
ENSSFOG00015014064	ddx42	83	80.128	ENSMFAG00000031356	DDX42	83	82.236	Macaca_fascicularis
ENSSFOG00015014064	ddx42	83	80.128	ENSMMUG00000016762	DDX42	88	82.236	Macaca_mulatta
ENSSFOG00015014064	ddx42	83	80.128	ENSMNEG00000038250	DDX42	84	82.236	Macaca_nemestrina
ENSSFOG00015014064	ddx42	83	80.128	ENSMLEG00000043080	DDX42	83	80.128	Mandrillus_leucophaeus
ENSSFOG00015014064	ddx42	81	88.026	ENSMAMG00000021888	ddx42	80	88.158	Mastacembelus_armatus
ENSSFOG00015014064	ddx42	83	86.497	ENSMZEG00005023103	ddx42	86	86.752	Maylandia_zebra
ENSSFOG00015014064	ddx42	81	81.997	ENSMGAG00000001822	DDX42	80	81.866	Meleagris_gallopavo
ENSSFOG00015014064	ddx42	70	82.137	ENSMAUG00000020774	-	87	81.985	Mesocricetus_auratus
ENSSFOG00015014064	ddx42	82	81.039	ENSMICG00000009952	DDX42	83	80.829	Microcebus_murinus
ENSSFOG00015014064	ddx42	81	81.770	ENSMOCG00000015504	Ddx42	84	80.077	Microtus_ochrogaster
ENSSFOG00015014064	ddx42	80	82.597	ENSMMOG00000016963	ddx42	76	83.534	Mola_mola
ENSSFOG00015014064	ddx42	50	84.615	ENSMODG00000009917	-	98	84.615	Monodelphis_domestica
ENSSFOG00015014064	ddx42	80	84.923	ENSMALG00000007800	ddx42	89	84.178	Monopterus_albus
ENSSFOG00015014064	ddx42	83	80.103	MGP_CAROLIEiJ_G0017314	Ddx42	83	79.974	Mus_caroli
ENSSFOG00015014064	ddx42	83	80.566	ENSMUSG00000020705	Ddx42	82	80.438	Mus_musculus
ENSSFOG00015014064	ddx42	72	84.718	MGP_PahariEiJ_G0018444	-	96	84.615	Mus_pahari
ENSSFOG00015014064	ddx42	81	81.866	MGP_SPRETEiJ_G0018158	Ddx42	82	80.438	Mus_spretus
ENSSFOG00015014064	ddx42	81	81.735	ENSMPUG00000014921	DDX42	81	80.438	Mustela_putorius_furo
ENSSFOG00015014064	ddx42	83	80.309	ENSMLUG00000011645	DDX42	80	80.309	Myotis_lucifugus
ENSSFOG00015014064	ddx42	83	79.974	ENSNGAG00000021897	Ddx42	84	79.974	Nannospalax_galili
ENSSFOG00015014064	ddx42	83	84.968	ENSNBRG00000004466	ddx42	86	85.096	Neolamprologus_brichardi
ENSSFOG00015014064	ddx42	83	80.128	ENSNLEG00000004248	DDX42	93	81.707	Nomascus_leucogenys
ENSSFOG00015014064	ddx42	63	71.966	ENSMEUG00000013227	-	71	71.966	Notamacropus_eugenii
ENSSFOG00015014064	ddx42	82	81.890	ENSOPRG00000014960	DDX42	81	81.759	Ochotona_princeps
ENSSFOG00015014064	ddx42	81	77.792	ENSODEG00000007810	DDX42	81	77.661	Octodon_degus
ENSSFOG00015014064	ddx42	83	86.497	ENSONIG00000000734	ddx42	86	86.879	Oreochromis_niloticus
ENSSFOG00015014064	ddx42	58	83.148	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSSFOG00015014064	ddx42	82	81.890	ENSOCUG00000004304	DDX42	75	81.890	Oryctolagus_cuniculus
ENSSFOG00015014064	ddx42	80	87.299	ENSORLG00000002395	ddx42	84	84.763	Oryzias_latipes
ENSSFOG00015014064	ddx42	80	87.567	ENSORLG00020011621	ddx42	86	85.019	Oryzias_latipes_hni
ENSSFOG00015014064	ddx42	80	87.166	ENSORLG00015004487	ddx42	86	84.635	Oryzias_latipes_hsok
ENSSFOG00015014064	ddx42	80	88.904	ENSOMEG00000020093	ddx42	86	86.172	Oryzias_melastigma
ENSSFOG00015014064	ddx42	82	81.039	ENSOGAG00000006872	DDX42	82	81.039	Otolemur_garnettii
ENSSFOG00015014064	ddx42	83	80.695	ENSOARG00000013540	DDX42	80	80.695	Ovis_aries
ENSSFOG00015014064	ddx42	83	80.128	ENSPPAG00000007496	DDX42	89	82.595	Pan_paniscus
ENSSFOG00015014064	ddx42	81	81.735	ENSPPRG00000002740	DDX42	81	81.735	Panthera_pardus
ENSSFOG00015014064	ddx42	81	81.735	ENSPTIG00000009932	DDX42	81	81.735	Panthera_tigris_altaica
ENSSFOG00015014064	ddx42	83	80.128	ENSPTRG00000009523	DDX42	89	82.595	Pan_troglodytes
ENSSFOG00015014064	ddx42	83	80.256	ENSPANG00000020990	DDX42	84	81.985	Papio_anubis
ENSSFOG00015014064	ddx42	83	91.271	ENSPKIG00000002901	ddx42	90	91.399	Paramormyrops_kingsleyae
ENSSFOG00015014064	ddx42	81	81.997	ENSPSIG00000010289	DDX42	92	81.866	Pelodiscus_sinensis
ENSSFOG00015014064	ddx42	80	80.234	ENSPMGG00000009323	ddx42	82	83.356	Periophthalmus_magnuspinnatus
ENSSFOG00015014064	ddx42	83	80.103	ENSPEMG00000006755	Ddx42	83	80.231	Peromyscus_maniculatus_bairdii
ENSSFOG00015014064	ddx42	80	71.094	ENSPMAG00000005580	ddx42	94	73.066	Petromyzon_marinus
ENSSFOG00015014064	ddx42	83	80.488	ENSPCIG00000009093	DDX42	82	80.488	Phascolarctos_cinereus
ENSSFOG00015014064	ddx42	80	87.299	ENSPFOG00000014104	ddx42	78	87.758	Poecilia_formosa
ENSSFOG00015014064	ddx42	80	86.898	ENSPLAG00000010522	ddx42	78	87.345	Poecilia_latipinna
ENSSFOG00015014064	ddx42	80	84.041	ENSPMEG00000010744	ddx42	77	87.895	Poecilia_mexicana
ENSSFOG00015014064	ddx42	80	83.784	ENSPREG00000009926	ddx42	79	87.450	Poecilia_reticulata
ENSSFOG00015014064	ddx42	83	78.378	ENSPPYG00000008531	DDX42	81	78.378	Pongo_abelii
ENSSFOG00015014064	ddx42	76	75.035	ENSPCAG00000002474	DDX42	81	74.468	Procavia_capensis
ENSSFOG00015014064	ddx42	83	70.194	ENSPCOG00000001559	DDX42	88	75.478	Propithecus_coquereli
ENSSFOG00015014064	ddx42	79	80.997	ENSPVAG00000000160	DDX42	77	82.083	Pteropus_vampyrus
ENSSFOG00015014064	ddx42	68	85.335	ENSPNYG00000013954	ddx42	80	85.469	Pundamilia_nyererei
ENSSFOG00015014064	ddx42	81	85.751	ENSPNAG00000017352	ddx42	85	86.181	Pygocentrus_nattereri
ENSSFOG00015014064	ddx42	83	80.438	ENSRNOG00000009474	Ddx42	82	80.309	Rattus_norvegicus
ENSSFOG00015014064	ddx42	83	80.128	ENSRBIG00000004781	DDX42	93	81.791	Rhinopithecus_bieti
ENSSFOG00015014064	ddx42	83	80.128	ENSRROG00000029794	DDX42	84	80.128	Rhinopithecus_roxellana
ENSSFOG00015014064	ddx42	81	81.866	ENSSBOG00000029624	DDX42	88	83.830	Saimiri_boliviensis_boliviensis
ENSSFOG00015014064	ddx42	81	81.866	ENSSHAG00000012896	-	80	81.866	Sarcophilus_harrisii
ENSSFOG00015014064	ddx42	53	58.571	ENSSHAG00000007919	-	64	61.348	Sarcophilus_harrisii
ENSSFOG00015014064	ddx42	83	84.379	ENSSMAG00000009077	ddx42	83	84.863	Scophthalmus_maximus
ENSSFOG00015014064	ddx42	80	88.446	ENSSDUG00000022221	ddx42	82	88.579	Seriola_dumerili
ENSSFOG00015014064	ddx42	80	87.433	ENSSLDG00000018483	ddx42	82	87.433	Seriola_lalandi_dorsalis
ENSSFOG00015014064	ddx42	81	81.603	ENSSARG00000009847	DDX42	81	81.603	Sorex_araneus
ENSSFOG00015014064	ddx42	81	82.523	ENSSPUG00000018806	DDX42	77	85.000	Sphenodon_punctatus
ENSSFOG00015014064	ddx42	83	82.896	ENSSPAG00000013055	ddx42	82	89.186	Stegastes_partitus
ENSSFOG00015014064	ddx42	69	82.764	ENSSSCG00000017289	DDX42	76	83.388	Sus_scrofa
ENSSFOG00015014064	ddx42	81	82.095	ENSTGUG00000001931	DDX42	77	82.920	Taeniopygia_guttata
ENSSFOG00015014064	ddx42	82	84.746	ENSTRUG00000010711	ddx42	99	85.714	Takifugu_rubripes
ENSSFOG00015014064	ddx42	81	77.188	ENSTBEG00000010159	DDX42	99	77.188	Tupaia_belangeri
ENSSFOG00015014064	ddx42	83	80.438	ENSTTRG00000006962	DDX42	81	80.438	Tursiops_truncatus
ENSSFOG00015014064	ddx42	83	80.438	ENSUAMG00000007321	DDX42	81	80.438	Ursus_americanus
ENSSFOG00015014064	ddx42	83	80.051	ENSUMAG00000017438	DDX42	82	80.051	Ursus_maritimus
ENSSFOG00015014064	ddx42	75	77.758	ENSVPAG00000009633	DDX42	74	77.758	Vicugna_pacos
ENSSFOG00015014064	ddx42	81	81.735	ENSVVUG00000006095	DDX42	81	81.735	Vulpes_vulpes
ENSSFOG00015014064	ddx42	96	71.413	ENSXETG00000003245	ddx42	81	79.306	Xenopus_tropicalis
ENSSFOG00015014064	ddx42	65	90.066	ENSXCOG00000017560	ddx42	74	91.409	Xiphophorus_couchianus
ENSSFOG00015014064	ddx42	80	87.952	ENSXMAG00000008138	ddx42	80	88.292	Xiphophorus_maculatus