EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015014394 (Gene tree)
Gene ID: 108937259
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4737 bases
Position: chrKV411140.1:7578130-7582866
Accession: 108937259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015022389	PseudoU_synth_2	PF00849.22	5.4e-25	1	1
ENSSFOP00015022405	PseudoU_synth_2	PF00849.22	5.4e-25	1	1
ENSSFOP00015022381	PseudoU_synth_2	PF00849.22	7.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022628	-	3480	-	ENSSFOP00015022381	328 (aa)	-	-
ENSSFOT00015022652	-	2839	XM_018757067	ENSSFOP00015022405	300 (aa)	XP_018612583	A0A1W5AGL0
ENSSFOT00015022636	-	3396	-	ENSSFOP00015022389	300 (aa)	-	A0A1W5AGL0

Gene Model

Click here to download ENSSFOG00015014394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014394	rpusd1	99	60.323	ENSG00000007376	RPUSD1	100	69.643	Homo_sapiens
ENSSFOG00015014394	rpusd1	99	70.764	ENSAPOG00000022221	rpusd1	98	71.761	Acanthochromis_polyacanthus
ENSSFOG00015014394	rpusd1	99	61.130	ENSAMEG00000007461	RPUSD1	99	61.130	Ailuropoda_melanoleuca
ENSSFOG00015014394	rpusd1	99	68.852	ENSACIG00000015863	rpusd1	98	71.148	Amphilophus_citrinellus
ENSSFOG00015014394	rpusd1	99	69.408	ENSAOCG00000021975	rpusd1	95	70.395	Amphiprion_ocellaris
ENSSFOG00015014394	rpusd1	99	69.737	ENSAPEG00000001316	rpusd1	95	70.724	Amphiprion_percula
ENSSFOG00015014394	rpusd1	99	69.408	ENSATEG00000002984	rpusd1	98	70.820	Anabas_testudineus
ENSSFOG00015014394	rpusd1	78	64.583	ENSAPLG00000012316	RPUSD1	99	64.583	Anas_platyrhynchos
ENSSFOG00015014394	rpusd1	99	68.792	ENSACAG00000008953	RPUSD1	99	68.792	Anolis_carolinensis
ENSSFOG00015014394	rpusd1	99	61.613	ENSANAG00000024709	RPUSD1	99	62.258	Aotus_nancymaae
ENSSFOG00015014394	rpusd1	99	67.949	ENSACLG00000013692	rpusd1	98	70.915	Astatotilapia_calliptera
ENSSFOG00015014394	rpusd1	99	68.896	ENSAMXG00000019802	rpusd1	99	68.896	Astyanax_mexicanus
ENSSFOG00015014394	rpusd1	99	64.145	ENSBTAG00000000179	RPUSD1	99	64.145	Bos_taurus
ENSSFOG00015014394	rpusd1	99	60.841	ENSCJAG00000012253	RPUSD1	99	61.935	Callithrix_jacchus
ENSSFOG00015014394	rpusd1	99	61.130	ENSCAFG00000019614	RPUSD1	99	61.130	Canis_familiaris
ENSSFOG00015014394	rpusd1	99	61.130	ENSCAFG00020008891	RPUSD1	99	61.130	Canis_lupus_dingo
ENSSFOG00015014394	rpusd1	99	64.474	ENSCHIG00000012872	RPUSD1	99	64.474	Capra_hircus
ENSSFOG00015014394	rpusd1	99	59.801	ENSTSYG00000036934	RPUSD1	81	78.302	Carlito_syrichta
ENSSFOG00015014394	rpusd1	99	60.328	ENSCAPG00000014219	RPUSD1	99	60.328	Cavia_aperea
ENSSFOG00015014394	rpusd1	99	60.328	ENSCPOG00000034604	RPUSD1	99	60.328	Cavia_porcellus
ENSSFOG00015014394	rpusd1	99	61.688	ENSCCAG00000034385	RPUSD1	99	61.812	Cebus_capucinus
ENSSFOG00015014394	rpusd1	99	60.714	ENSCATG00000042983	RPUSD1	81	79.245	Cercocebus_atys
ENSSFOG00015014394	rpusd1	99	60.855	ENSCLAG00000013966	RPUSD1	99	60.194	Chinchilla_lanigera
ENSSFOG00015014394	rpusd1	99	60.390	ENSCSAG00000012121	RPUSD1	99	60.841	Chlorocebus_sabaeus
ENSSFOG00015014394	rpusd1	99	66.556	ENSCPBG00000021101	RPUSD1	99	66.556	Chrysemys_picta_bellii
ENSSFOG00015014394	rpusd1	84	67.717	ENSCANG00000028576	RPUSD1	98	68.992	Colobus_angolensis_palliatus
ENSSFOG00015014394	rpusd1	99	62.791	ENSCGRG00001014253	Rpusd1	99	62.791	Cricetulus_griseus_chok1gshd
ENSSFOG00015014394	rpusd1	99	62.791	ENSCGRG00000017995	Rpusd1	99	62.791	Cricetulus_griseus_crigri
ENSSFOG00015014394	rpusd1	99	72.483	ENSCSEG00000018512	rpusd1	99	72.483	Cynoglossus_semilaevis
ENSSFOG00015014394	rpusd1	99	71.237	ENSCVAG00000022746	rpusd1	98	71.237	Cyprinodon_variegatus
ENSSFOG00015014394	rpusd1	99	77.592	ENSDARG00000060192	rpusd1	99	77.592	Danio_rerio
ENSSFOG00015014394	rpusd1	99	59.609	ENSDNOG00000003721	RPUSD1	99	60.328	Dasypus_novemcinctus
ENSSFOG00015014394	rpusd1	99	61.589	ENSDORG00000026656	Rpusd1	99	61.794	Dipodomys_ordii
ENSSFOG00015014394	rpusd1	97	47.604	ENSEBUG00000008767	rpusd1	92	47.604	Eptatretus_burgeri
ENSSFOG00015014394	rpusd1	99	59.936	ENSEASG00005018421	RPUSD1	75	60.577	Equus_asinus_asinus
ENSSFOG00015014394	rpusd1	99	65.385	ENSELUG00000014307	rpusd1	88	67.763	Esox_lucius
ENSSFOG00015014394	rpusd1	99	61.258	ENSFCAG00000010359	RPUSD1	99	61.258	Felis_catus
ENSSFOG00015014394	rpusd1	99	69.565	ENSFALG00000003211	RPUSD1	99	69.565	Ficedula_albicollis
ENSSFOG00015014394	rpusd1	99	60.855	ENSFDAG00000013398	RPUSD1	99	60.855	Fukomys_damarensis
ENSSFOG00015014394	rpusd1	99	70.861	ENSFHEG00000004736	rpusd1	98	72.185	Fundulus_heteroclitus
ENSSFOG00015014394	rpusd1	99	67.987	ENSGMOG00000010756	rpusd1	98	68.421	Gadus_morhua
ENSSFOG00015014394	rpusd1	99	69.307	ENSGALG00000005315	RPUSD1	99	69.307	Gallus_gallus
ENSSFOG00015014394	rpusd1	99	71.906	ENSGAFG00000009886	rpusd1	98	71.906	Gambusia_affinis
ENSSFOG00015014394	rpusd1	98	70.199	ENSGACG00000014276	rpusd1	98	71.523	Gasterosteus_aculeatus
ENSSFOG00015014394	rpusd1	99	66.887	ENSGAGG00000004181	RPUSD1	99	66.887	Gopherus_agassizii
ENSSFOG00015014394	rpusd1	99	61.290	ENSGGOG00000013997	RPUSD1	99	61.935	Gorilla_gorilla
ENSSFOG00015014394	rpusd1	99	68.269	ENSHBUG00000023728	rpusd1	98	71.242	Haplochromis_burtoni
ENSSFOG00015014394	rpusd1	99	61.513	ENSHGLG00000002595	RPUSD1	99	60.194	Heterocephalus_glaber_female
ENSSFOG00015014394	rpusd1	99	61.513	ENSHGLG00100014303	RPUSD1	99	60.194	Heterocephalus_glaber_male
ENSSFOG00015014394	rpusd1	99	71.429	ENSHCOG00000002390	rpusd1	99	71.429	Hippocampus_comes
ENSSFOG00015014394	rpusd1	99	68.771	ENSIPUG00000001570	rpusd1	99	69.103	Ictalurus_punctatus
ENSSFOG00015014394	rpusd1	99	62.583	ENSSTOG00000004276	RPUSD1	99	62.583	Ictidomys_tridecemlineatus
ENSSFOG00015014394	rpusd1	99	61.462	ENSJJAG00000015696	Rpusd1	99	61.462	Jaculus_jaculus
ENSSFOG00015014394	rpusd1	99	71.237	ENSKMAG00000017287	rpusd1	98	71.237	Kryptolebias_marmoratus
ENSSFOG00015014394	rpusd1	99	70.066	ENSLBEG00000013354	RPUSD1	98	70.724	Labrus_bergylta
ENSSFOG00015014394	rpusd1	99	70.066	ENSLBEG00000022502	rpusd1	98	70.724	Labrus_bergylta
ENSSFOG00015014394	rpusd1	100	69.103	ENSLACG00000008869	RPUSD1	99	69.103	Latimeria_chalumnae
ENSSFOG00015014394	rpusd1	72	88.372	ENSLOCG00000005682	rpusd1	99	88.372	Lepisosteus_oculatus
ENSSFOG00015014394	rpusd1	99	60.797	ENSLAFG00000002115	RPUSD1	99	60.797	Loxodonta_africana
ENSSFOG00015014394	rpusd1	99	60.841	ENSMFAG00000003961	RPUSD1	99	61.489	Macaca_fascicularis
ENSSFOG00015014394	rpusd1	99	60.841	ENSMMUG00000000842	RPUSD1	99	61.489	Macaca_mulatta
ENSSFOG00015014394	rpusd1	99	60.841	ENSMNEG00000042712	RPUSD1	99	61.489	Macaca_nemestrina
ENSSFOG00015014394	rpusd1	99	60.841	ENSMLEG00000030591	RPUSD1	99	61.489	Mandrillus_leucophaeus
ENSSFOG00015014394	rpusd1	99	68.590	ENSMAMG00000004735	rpusd1	98	71.148	Mastacembelus_armatus
ENSSFOG00015014394	rpusd1	99	67.949	ENSMZEG00005003214	rpusd1	98	70.915	Maylandia_zebra
ENSSFOG00015014394	rpusd1	97	69.492	ENSMGAG00000005447	RPUSD1	99	69.492	Meleagris_gallopavo
ENSSFOG00015014394	rpusd1	84	59.449	ENSMAUG00000019998	Rpusd1	97	59.449	Mesocricetus_auratus
ENSSFOG00015014394	rpusd1	99	60.458	ENSMICG00000017561	RPUSD1	81	79.245	Microcebus_murinus
ENSSFOG00015014394	rpusd1	99	60.927	ENSMOCG00000014082	Rpusd1	99	60.927	Microtus_ochrogaster
ENSSFOG00015014394	rpusd1	99	69.799	ENSMMOG00000012569	rpusd1	99	70.805	Mola_mola
ENSSFOG00015014394	rpusd1	99	65.584	ENSMODG00000016882	RPUSD1	98	66.887	Monodelphis_domestica
ENSSFOG00015014394	rpusd1	99	70.492	ENSMALG00000017818	rpusd1	98	71.475	Monopterus_albus
ENSSFOG00015014394	rpusd1	99	61.921	MGP_CAROLIEiJ_G0021244	Rpusd1	99	61.921	Mus_caroli
ENSSFOG00015014394	rpusd1	99	62.252	ENSMUSG00000041199	Rpusd1	99	62.252	Mus_musculus
ENSSFOG00015014394	rpusd1	99	61.184	MGP_PahariEiJ_G0023562	Rpusd1	99	61.513	Mus_pahari
ENSSFOG00015014394	rpusd1	99	62.252	MGP_SPRETEiJ_G0022155	Rpusd1	99	62.252	Mus_spretus
ENSSFOG00015014394	rpusd1	99	59.801	ENSMPUG00000015897	RPUSD1	99	59.801	Mustela_putorius_furo
ENSSFOG00015014394	rpusd1	99	60.912	ENSMLUG00000001089	RPUSD1	99	61.039	Myotis_lucifugus
ENSSFOG00015014394	rpusd1	99	61.921	ENSNGAG00000003595	Rpusd1	99	61.921	Nannospalax_galili
ENSSFOG00015014394	rpusd1	99	72.333	ENSNBRG00000006457	rpusd1	98	72.727	Neolamprologus_brichardi
ENSSFOG00015014394	rpusd1	54	53.179	ENSNLEG00000008424	-	98	54.335	Nomascus_leucogenys
ENSSFOG00015014394	rpusd1	99	67.559	ENSMEUG00000016049	RPUSD1	99	67.559	Notamacropus_eugenii
ENSSFOG00015014394	rpusd1	99	55.814	ENSOPRG00000008340	RPUSD1	99	55.814	Ochotona_princeps
ENSSFOG00015014394	rpusd1	99	60.656	ENSODEG00000016945	RPUSD1	99	60.656	Octodon_degus
ENSSFOG00015014394	rpusd1	99	68.489	ENSONIG00000015672	rpusd1	99	71.475	Oreochromis_niloticus
ENSSFOG00015014394	rpusd1	99	70.234	ENSORLG00000013009	rpusd1	98	70.234	Oryzias_latipes
ENSSFOG00015014394	rpusd1	99	69.900	ENSORLG00020010382	rpusd1	98	69.900	Oryzias_latipes_hni
ENSSFOG00015014394	rpusd1	99	69.231	ENSORLG00015021354	rpusd1	98	69.231	Oryzias_latipes_hsok
ENSSFOG00015014394	rpusd1	99	69.536	ENSOMEG00000021426	rpusd1	98	69.536	Oryzias_melastigma
ENSSFOG00015014394	rpusd1	99	61.093	ENSOGAG00000003795	RPUSD1	99	60.841	Otolemur_garnettii
ENSSFOG00015014394	rpusd1	99	64.145	ENSOARG00000014254	RPUSD1	99	64.145	Ovis_aries
ENSSFOG00015014394	rpusd1	99	60.645	ENSPPAG00000034797	RPUSD1	99	61.290	Pan_paniscus
ENSSFOG00015014394	rpusd1	99	61.258	ENSPPRG00000012389	RPUSD1	99	61.258	Panthera_pardus
ENSSFOG00015014394	rpusd1	99	61.258	ENSPTIG00000008545	RPUSD1	80	76.415	Panthera_tigris_altaica
ENSSFOG00015014394	rpusd1	99	60.645	ENSPTRG00000007565	RPUSD1	99	61.290	Pan_troglodytes
ENSSFOG00015014394	rpusd1	99	60.841	ENSPANG00000024401	RPUSD1	99	61.489	Papio_anubis
ENSSFOG00015014394	rpusd1	99	79.070	ENSPKIG00000018890	rpusd1	90	79.070	Paramormyrops_kingsleyae
ENSSFOG00015014394	rpusd1	99	69.536	ENSPSIG00000013945	RPUSD1	99	69.536	Pelodiscus_sinensis
ENSSFOG00015014394	rpusd1	99	69.360	ENSPMGG00000014950	rpusd1	98	69.360	Periophthalmus_magnuspinnatus
ENSSFOG00015014394	rpusd1	99	62.252	ENSPEMG00000000497	Rpusd1	99	62.252	Peromyscus_maniculatus_bairdii
ENSSFOG00015014394	rpusd1	86	59.846	ENSPMAG00000001563	rpusd1	99	53.311	Petromyzon_marinus
ENSSFOG00015014394	rpusd1	99	67.224	ENSPCIG00000021216	-	93	67.224	Phascolarctos_cinereus
ENSSFOG00015014394	rpusd1	99	72.483	ENSPFOG00000007946	rpusd1	98	72.483	Poecilia_formosa
ENSSFOG00015014394	rpusd1	99	72.483	ENSPLAG00000011925	rpusd1	98	72.483	Poecilia_latipinna
ENSSFOG00015014394	rpusd1	99	72.819	ENSPMEG00000002910	rpusd1	98	72.819	Poecilia_mexicana
ENSSFOG00015014394	rpusd1	99	72.241	ENSPREG00000019851	rpusd1	98	72.241	Poecilia_reticulata
ENSSFOG00015014394	rpusd1	78	71.667	ENSPCAG00000002258	RPUSD1	85	71.667	Procavia_capensis
ENSSFOG00015014394	rpusd1	99	60.450	ENSPCOG00000022582	RPUSD1	99	60.897	Propithecus_coquereli
ENSSFOG00015014394	rpusd1	99	57.742	ENSPVAG00000013104	RPUSD1	99	58.065	Pteropus_vampyrus
ENSSFOG00015014394	rpusd1	99	71.717	ENSPNYG00000024076	rpusd1	98	72.391	Pundamilia_nyererei
ENSSFOG00015014394	rpusd1	99	68.896	ENSPNAG00000013806	rpusd1	99	68.896	Pygocentrus_nattereri
ENSSFOG00015014394	rpusd1	99	61.921	ENSRNOG00000023639	Rpusd1	99	61.921	Rattus_norvegicus
ENSSFOG00015014394	rpusd1	99	61.165	ENSRBIG00000030238	RPUSD1	99	61.812	Rhinopithecus_bieti
ENSSFOG00015014394	rpusd1	99	61.165	ENSRROG00000036663	RPUSD1	99	61.812	Rhinopithecus_roxellana
ENSSFOG00015014394	rpusd1	99	62.914	ENSSBOG00000033063	RPUSD1	99	63.245	Saimiri_boliviensis_boliviensis
ENSSFOG00015014394	rpusd1	99	67.559	ENSSHAG00000013500	RPUSD1	99	67.559	Sarcophilus_harrisii
ENSSFOG00015014394	rpusd1	99	71.711	ENSSMAG00000008045	rpusd1	91	73.355	Scophthalmus_maximus
ENSSFOG00015014394	rpusd1	84	80.556	ENSSDUG00000001829	rpusd1	95	72.368	Seriola_dumerili
ENSSFOG00015014394	rpusd1	84	80.556	ENSSLDG00000020853	rpusd1	95	72.368	Seriola_lalandi_dorsalis
ENSSFOG00015014394	rpusd1	55	71.856	ENSSARG00000011187	-	100	71.856	Sorex_araneus
ENSSFOG00015014394	rpusd1	62	62.234	ENSSPUG00000005119	-	99	62.234	Sphenodon_punctatus
ENSSFOG00015014394	rpusd1	99	71.053	ENSSPAG00000012708	rpusd1	98	71.711	Stegastes_partitus
ENSSFOG00015014394	rpusd1	99	62.783	ENSSSCG00000008000	RPUSD1	98	69.141	Sus_scrofa
ENSSFOG00015014394	rpusd1	84	75.000	ENSTGUG00000015375	RPUSD1	99	75.000	Taeniopygia_guttata
ENSSFOG00015014394	rpusd1	99	68.078	ENSTRUG00000003041	rpusd1	98	68.710	Takifugu_rubripes
ENSSFOG00015014394	rpusd1	99	66.667	ENSTNIG00000002660	rpusd1	99	66.667	Tetraodon_nigroviridis
ENSSFOG00015014394	rpusd1	99	61.812	ENSTTRG00000010167	RPUSD1	99	61.812	Tursiops_truncatus
ENSSFOG00015014394	rpusd1	99	61.130	ENSUAMG00000012736	RPUSD1	99	61.130	Ursus_americanus
ENSSFOG00015014394	rpusd1	99	61.130	ENSUMAG00000021174	RPUSD1	99	61.130	Ursus_maritimus
ENSSFOG00015014394	rpusd1	99	61.794	ENSVVUG00000012357	RPUSD1	99	61.794	Vulpes_vulpes
ENSSFOG00015014394	rpusd1	99	68.227	ENSXETG00000007184	rpusd1	99	68.227	Xenopus_tropicalis
ENSSFOG00015014394	rpusd1	99	71.572	ENSXCOG00000017930	rpusd1	98	71.572	Xiphophorus_couchianus
ENSSFOG00015014394	rpusd1	99	71.906	ENSXMAG00000024084	rpusd1	98	71.906	Xiphophorus_maculatus