EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015014409 (Gene tree)
Gene ID: 108939773
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10986 bases
Position: chrKV411197.1:11494651-11505636
Accession: 108939773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015022393	SAP	PF02037.27	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022640	-	5532	XM_018761375	ENSSFOP00015022393	610 (aa)	XP_018616891	A0A1W5AVG4

Gene Model

Click here to download ENSSFOG00015014409's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014409	xrcc6	99	60.656	ENSG00000196419	XRCC6	99	60.820	Homo_sapiens
ENSSFOG00015014409	xrcc6	99	73.355	ENSAPOG00000012704	xrcc6	99	73.191	Acanthochromis_polyacanthus
ENSSFOG00015014409	xrcc6	99	74.507	ENSACIG00000021277	xrcc6	99	74.507	Amphilophus_citrinellus
ENSSFOG00015014409	xrcc6	99	72.368	ENSAOCG00000021344	xrcc6	99	72.368	Amphiprion_ocellaris
ENSSFOG00015014409	xrcc6	99	72.697	ENSAPEG00000020712	xrcc6	99	72.697	Amphiprion_percula
ENSSFOG00015014409	xrcc6	99	73.235	ENSATEG00000007119	xrcc6	99	73.235	Anabas_testudineus
ENSSFOG00015014409	xrcc6	90	63.225	ENSAPLG00000004469	XRCC6	99	63.225	Anas_platyrhynchos
ENSSFOG00015014409	xrcc6	99	53.871	ENSANAG00000020017	-	90	62.871	Aotus_nancymaae
ENSSFOG00015014409	xrcc6	99	60.328	ENSANAG00000018684	XRCC6	99	60.328	Aotus_nancymaae
ENSSFOG00015014409	xrcc6	99	53.443	ENSANAG00000035230	-	99	53.443	Aotus_nancymaae
ENSSFOG00015014409	xrcc6	99	50.900	ENSANAG00000023445	-	99	50.900	Aotus_nancymaae
ENSSFOG00015014409	xrcc6	99	73.849	ENSACLG00000018608	xrcc6	99	73.727	Astatotilapia_calliptera
ENSSFOG00015014409	xrcc6	99	80.131	ENSAMXG00000007545	xrcc6	100	80.131	Astyanax_mexicanus
ENSSFOG00015014409	xrcc6	99	60.492	ENSCJAG00000045512	XRCC6	99	60.492	Callithrix_jacchus
ENSSFOG00015014409	xrcc6	100	59.283	ENSTSYG00000011348	XRCC6	99	59.446	Carlito_syrichta
ENSSFOG00015014409	xrcc6	93	64.319	ENSCCAG00000030468	-	99	64.319	Cebus_capucinus
ENSSFOG00015014409	xrcc6	99	49.425	ENSCCAG00000035711	-	99	48.940	Cebus_capucinus
ENSSFOG00015014409	xrcc6	99	56.885	ENSCCAG00000030041	-	94	56.885	Cebus_capucinus
ENSSFOG00015014409	xrcc6	99	49.423	ENSCCAG00000037663	-	96	49.094	Cebus_capucinus
ENSSFOG00015014409	xrcc6	99	60.656	ENSCATG00000042366	XRCC6	99	60.820	Cercocebus_atys
ENSSFOG00015014409	xrcc6	100	60.912	ENSCLAG00000016669	XRCC6	99	60.912	Chinchilla_lanigera
ENSSFOG00015014409	xrcc6	99	60.656	ENSCSAG00000005784	XRCC6	99	60.820	Chlorocebus_sabaeus
ENSSFOG00015014409	xrcc6	100	61.990	ENSCPBG00000020535	XRCC6	99	61.827	Chrysemys_picta_bellii
ENSSFOG00015014409	xrcc6	98	32.836	ENSCING00000000633	-	98	32.836	Ciona_intestinalis
ENSSFOG00015014409	xrcc6	99	60.656	ENSCANG00000031032	XRCC6	99	60.820	Colobus_angolensis_palliatus
ENSSFOG00015014409	xrcc6	100	55.065	ENSCGRG00001019029	Xrcc6	99	55.229	Cricetulus_griseus_chok1gshd
ENSSFOG00015014409	xrcc6	100	60.294	ENSCGRG00000001528	Xrcc6	99	60.458	Cricetulus_griseus_crigri
ENSSFOG00015014409	xrcc6	99	67.928	ENSCSEG00000020434	xrcc6	99	67.928	Cynoglossus_semilaevis
ENSSFOG00015014409	xrcc6	99	75.329	ENSCVAG00000002189	xrcc6	99	75.329	Cyprinodon_variegatus
ENSSFOG00015014409	xrcc6	100	77.087	ENSDARG00000071551	xrcc6	100	76.759	Danio_rerio
ENSSFOG00015014409	xrcc6	78	57.421	ENSETEG00000015333	-	77	57.421	Echinops_telfairi
ENSSFOG00015014409	xrcc6	100	58.564	ENSEASG00005001514	XRCC6	99	59.217	Equus_asinus_asinus
ENSSFOG00015014409	xrcc6	100	58.564	ENSECAG00000017563	XRCC6	99	58.907	Equus_caballus
ENSSFOG00015014409	xrcc6	99	75.041	ENSELUG00000020301	xrcc6	99	75.041	Esox_lucius
ENSSFOG00015014409	xrcc6	100	60.454	ENSFALG00000011908	XRCC6	97	60.778	Ficedula_albicollis
ENSSFOG00015014409	xrcc6	99	74.671	ENSFHEG00000016833	xrcc6	99	74.671	Fundulus_heteroclitus
ENSSFOG00015014409	xrcc6	89	76.357	ENSGMOG00000013524	xrcc6	100	65.309	Gadus_morhua
ENSSFOG00015014409	xrcc6	99	60.454	ENSGALG00000011932	XRCC6	99	60.940	Gallus_gallus
ENSSFOG00015014409	xrcc6	99	72.697	ENSGAFG00000008130	xrcc6	99	72.250	Gambusia_affinis
ENSSFOG00015014409	xrcc6	100	71.057	ENSGACG00000004868	xrcc6	99	71.057	Gasterosteus_aculeatus
ENSSFOG00015014409	xrcc6	100	61.664	ENSGAGG00000017518	XRCC6	99	61.501	Gopherus_agassizii
ENSSFOG00015014409	xrcc6	99	60.492	ENSGGOG00000015885	XRCC6	99	60.656	Gorilla_gorilla
ENSSFOG00015014409	xrcc6	92	73.227	ENSHBUG00000023281	xrcc6	99	73.227	Haplochromis_burtoni
ENSSFOG00015014409	xrcc6	100	59.380	ENSHGLG00000018078	XRCC6	99	59.380	Heterocephalus_glaber_female
ENSSFOG00015014409	xrcc6	100	59.380	ENSHGLG00100011264	XRCC6	99	59.380	Heterocephalus_glaber_male
ENSSFOG00015014409	xrcc6	99	70.115	ENSHCOG00000009821	xrcc6	99	70.115	Hippocampus_comes
ENSSFOG00015014409	xrcc6	100	78.033	ENSIPUG00000000767	xrcc6	100	78.033	Ictalurus_punctatus
ENSSFOG00015014409	xrcc6	100	59.543	ENSSTOG00000009490	XRCC6	99	60.359	Ictidomys_tridecemlineatus
ENSSFOG00015014409	xrcc6	100	55.537	ENSJJAG00000017136	Xrcc6	99	55.700	Jaculus_jaculus
ENSSFOG00015014409	xrcc6	99	74.836	ENSKMAG00000002141	xrcc6	99	74.836	Kryptolebias_marmoratus
ENSSFOG00015014409	xrcc6	99	72.250	ENSLBEG00000002691	xrcc6	99	72.250	Labrus_bergylta
ENSSFOG00015014409	xrcc6	84	73.077	ENSLOCG00000011533	xrcc6	99	77.143	Lepisosteus_oculatus
ENSSFOG00015014409	xrcc6	99	60.656	ENSMFAG00000003352	XRCC6	99	60.820	Macaca_fascicularis
ENSSFOG00015014409	xrcc6	99	60.656	ENSMMUG00000001856	XRCC6	99	60.820	Macaca_mulatta
ENSSFOG00015014409	xrcc6	99	60.656	ENSMNEG00000035076	XRCC6	99	60.820	Macaca_nemestrina
ENSSFOG00015014409	xrcc6	99	60.656	ENSMLEG00000019869	XRCC6	99	60.820	Mandrillus_leucophaeus
ENSSFOG00015014409	xrcc6	96	71.502	ENSMAMG00000003405	xrcc6	97	71.453	Mastacembelus_armatus
ENSSFOG00015014409	xrcc6	99	72.131	ENSMAMG00000003368	xrcc6	99	71.639	Mastacembelus_armatus
ENSSFOG00015014409	xrcc6	99	73.684	ENSMZEG00005028080	xrcc6	99	73.563	Maylandia_zebra
ENSSFOG00015014409	xrcc6	99	60.454	ENSMGAG00000012146	XRCC6	99	60.616	Meleagris_gallopavo
ENSSFOG00015014409	xrcc6	100	60.131	ENSMAUG00000017340	Xrcc6	100	60.294	Mesocricetus_auratus
ENSSFOG00015014409	xrcc6	100	61.111	ENSMOCG00000015717	Xrcc6	100	61.275	Microtus_ochrogaster
ENSSFOG00015014409	xrcc6	99	71.100	ENSMMOG00000003536	xrcc6	99	70.772	Mola_mola
ENSSFOG00015014409	xrcc6	99	72.906	ENSMALG00000013912	xrcc6	95	72.906	Monopterus_albus
ENSSFOG00015014409	xrcc6	100	55.719	MGP_CAROLIEiJ_G0020067	Xrcc6	99	55.882	Mus_caroli
ENSSFOG00015014409	xrcc6	100	60.131	ENSMUSG00000022471	Xrcc6	99	62.264	Mus_musculus
ENSSFOG00015014409	xrcc6	100	60.294	MGP_PahariEiJ_G0020069	Xrcc6	99	60.458	Mus_pahari
ENSSFOG00015014409	xrcc6	96	61.433	MGP_SPRETEiJ_G0020967	Xrcc6	99	61.433	Mus_spretus
ENSSFOG00015014409	xrcc6	100	59.150	ENSNGAG00000013750	Xrcc6	99	59.314	Nannospalax_galili
ENSSFOG00015014409	xrcc6	99	74.178	ENSNBRG00000004125	xrcc6	99	74.178	Neolamprologus_brichardi
ENSSFOG00015014409	xrcc6	95	61.446	ENSOPRG00000002386	XRCC6	99	61.446	Ochotona_princeps
ENSSFOG00015014409	xrcc6	100	60.912	ENSODEG00000015847	XRCC6	99	60.912	Octodon_degus
ENSSFOG00015014409	xrcc6	99	73.849	ENSONIG00000019715	xrcc6	99	73.849	Oreochromis_niloticus
ENSSFOG00015014409	xrcc6	68	64.833	ENSOANG00000011328	XRCC6	99	64.833	Ornithorhynchus_anatinus
ENSSFOG00015014409	xrcc6	99	60.526	ENSOCUG00000006948	XRCC6	99	60.526	Oryctolagus_cuniculus
ENSSFOG00015014409	xrcc6	99	74.548	ENSORLG00020007820	xrcc6	99	74.548	Oryzias_latipes_hni
ENSSFOG00015014409	xrcc6	99	74.384	ENSORLG00015006406	xrcc6	99	74.384	Oryzias_latipes_hsok
ENSSFOG00015014409	xrcc6	99	74.713	ENSOMEG00000008998	xrcc6	99	74.713	Oryzias_melastigma
ENSSFOG00015014409	xrcc6	100	59.869	ENSOGAG00000008821	XRCC6	100	60.033	Otolemur_garnettii
ENSSFOG00015014409	xrcc6	92	61.141	ENSPPAG00000037167	XRCC6	99	61.141	Pan_paniscus
ENSSFOG00015014409	xrcc6	99	60.656	ENSPTRG00000022548	XRCC6	99	61.512	Pan_troglodytes
ENSSFOG00015014409	xrcc6	99	60.656	ENSPTRG00000045824	XRCC6	99	61.512	Pan_troglodytes
ENSSFOG00015014409	xrcc6	99	60.492	ENSPANG00000001252	XRCC6	98	63.913	Papio_anubis
ENSSFOG00015014409	xrcc6	100	81.311	ENSPKIG00000003974	xrcc6	100	81.311	Paramormyrops_kingsleyae
ENSSFOG00015014409	xrcc6	99	71.096	ENSPMGG00000014220	xrcc6	100	71.429	Periophthalmus_magnuspinnatus
ENSSFOG00015014409	xrcc6	100	59.967	ENSPEMG00000023446	Xrcc6	99	60.131	Peromyscus_maniculatus_bairdii
ENSSFOG00015014409	xrcc6	99	60.755	ENSPCIG00000026409	XRCC6	99	60.920	Phascolarctos_cinereus
ENSSFOG00015014409	xrcc6	99	74.013	ENSPFOG00000017173	xrcc6	99	74.013	Poecilia_formosa
ENSSFOG00015014409	xrcc6	99	73.520	ENSPLAG00000000562	xrcc6	99	73.520	Poecilia_latipinna
ENSSFOG00015014409	xrcc6	99	73.849	ENSPMEG00000018478	xrcc6	99	73.849	Poecilia_mexicana
ENSSFOG00015014409	xrcc6	99	73.607	ENSPREG00000020957	xrcc6	93	73.607	Poecilia_reticulata
ENSSFOG00015014409	xrcc6	99	54.262	ENSPPYG00000011876	XRCC6	99	54.426	Pongo_abelii
ENSSFOG00015014409	xrcc6	100	58.170	ENSPVAG00000001168	XRCC6	99	58.007	Pteropus_vampyrus
ENSSFOG00015014409	xrcc6	99	73.520	ENSPNYG00000003815	xrcc6	99	70.110	Pundamilia_nyererei
ENSSFOG00015014409	xrcc6	100	59.804	ENSRNOG00000006392	Xrcc6	99	59.967	Rattus_norvegicus
ENSSFOG00015014409	xrcc6	99	56.393	ENSRBIG00000039794	XRCC6	99	56.557	Rhinopithecus_bieti
ENSSFOG00015014409	xrcc6	99	60.656	ENSRROG00000030297	XRCC6	99	60.820	Rhinopithecus_roxellana
ENSSFOG00015014409	xrcc6	67	55.774	ENSSBOG00000024724	-	99	55.774	Saimiri_boliviensis_boliviensis
ENSSFOG00015014409	xrcc6	100	59.609	ENSSHAG00000010790	XRCC6	99	59.935	Sarcophilus_harrisii
ENSSFOG00015014409	xrcc6	99	74.178	ENSSMAG00000006496	xrcc6	99	74.056	Scophthalmus_maximus
ENSSFOG00015014409	xrcc6	99	73.849	ENSSDUG00000007542	xrcc6	99	73.727	Seriola_dumerili
ENSSFOG00015014409	xrcc6	99	73.520	ENSSLDG00000009974	xrcc6	99	73.399	Seriola_lalandi_dorsalis
ENSSFOG00015014409	xrcc6	100	62.316	ENSSPUG00000012086	XRCC6	99	62.480	Sphenodon_punctatus
ENSSFOG00015014409	xrcc6	99	74.713	ENSSPAG00000015199	xrcc6	99	74.713	Stegastes_partitus
ENSSFOG00015014409	xrcc6	96	62.862	ENSTGUG00000009852	-	100	61.526	Taeniopygia_guttata
ENSSFOG00015014409	xrcc6	99	69.572	ENSTRUG00000017070	xrcc6	99	69.408	Takifugu_rubripes
ENSSFOG00015014409	xrcc6	96	69.779	ENSTNIG00000012947	xrcc6	99	69.779	Tetraodon_nigroviridis
ENSSFOG00015014409	xrcc6	95	55.670	ENSTBEG00000011736	XRCC6	99	55.670	Tupaia_belangeri
ENSSFOG00015014409	xrcc6	91	55.140	ENSTTRG00000006749	XRCC6	90	56.698	Tursiops_truncatus
ENSSFOG00015014409	xrcc6	99	73.849	ENSXMAG00000009691	xrcc6	99	73.849	Xiphophorus_maculatus