EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014476 (Gene tree)
Gene ID: 108920026
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10395 bases
Position: chrKV410804.1:355794-366188
Accession: 108920026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015022576	DEAD	PF00270.29	5.9e-69	1	1
ENSSFOP00015022613	DEAD	PF00270.29	6.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022826	-	3617	XM_018728481	ENSSFOP00015022576	740 (aa)	XP_018583997	A0A1W4XXA7
ENSSFOT00015022863	-	3587	-	ENSSFOP00015022613	730 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015014476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014476	ddx1	66	40.909	ENSSFOG00015021150	ddx49	86	40.909
ENSSFOG00015014476	ddx1	53	35.484	ENSSFOG00015006531	ddx4	53	35.484
ENSSFOG00015014476	ddx1	52	43.137	ENSSFOG00015021404	ddx61	66	43.137
ENSSFOG00015014476	ddx1	55	40.909	ENSSFOG00015017496	ddx55	61	40.909
ENSSFOG00015014476	ddx1	56	50.000	ENSSFOG00015013392	ddx47	73	50.000
ENSSFOG00015014476	ddx1	52	43.137	ENSSFOG00015023211	ddx6	68	43.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014476	ddx1	100	83.243	ENSG00000079785	DDX1	100	83.243	Homo_sapiens
ENSSFOG00015014476	ddx1	100	85.270	ENSAPOG00000003166	ddx1	100	85.286	Acanthochromis_polyacanthus
ENSSFOG00015014476	ddx1	99	82.950	ENSAMEG00000001071	DDX1	99	82.950	Ailuropoda_melanoleuca
ENSSFOG00015014476	ddx1	90	85.106	ENSACIG00000017422	ddx1	99	85.866	Amphilophus_citrinellus
ENSSFOG00015014476	ddx1	91	82.006	ENSAOCG00000015436	ddx1	94	85.377	Amphiprion_ocellaris
ENSSFOG00015014476	ddx1	100	86.351	ENSAPEG00000007699	ddx1	100	86.376	Amphiprion_percula
ENSSFOG00015014476	ddx1	94	86.272	ENSATEG00000003965	ddx1	98	86.565	Anabas_testudineus
ENSSFOG00015014476	ddx1	100	84.005	ENSAPLG00000011093	DDX1	100	84.005	Anas_platyrhynchos
ENSSFOG00015014476	ddx1	94	84.241	ENSACAG00000011036	DDX1	99	84.241	Anolis_carolinensis
ENSSFOG00015014476	ddx1	100	83.514	ENSANAG00000037912	DDX1	100	83.514	Aotus_nancymaae
ENSSFOG00015014476	ddx1	99	86.567	ENSACLG00000008850	ddx1	99	86.544	Astatotilapia_calliptera
ENSSFOG00015014476	ddx1	100	88.649	ENSAMXG00000002100	ddx1	100	88.649	Astyanax_mexicanus
ENSSFOG00015014476	ddx1	100	83.514	ENSBTAG00000009906	DDX1	100	83.514	Bos_taurus
ENSSFOG00015014476	ddx1	98	46.081	WBGene00021938	Y55F3BR.1	98	46.081	Caenorhabditis_elegans
ENSSFOG00015014476	ddx1	100	83.243	ENSCJAG00000007076	DDX1	100	83.243	Callithrix_jacchus
ENSSFOG00015014476	ddx1	100	83.243	ENSCAFG00000003686	DDX1	100	83.243	Canis_familiaris
ENSSFOG00015014476	ddx1	100	83.243	ENSCAFG00020026083	DDX1	100	83.243	Canis_lupus_dingo
ENSSFOG00015014476	ddx1	100	83.243	ENSCHIG00000011046	DDX1	100	83.243	Capra_hircus
ENSSFOG00015014476	ddx1	100	83.243	ENSTSYG00000002477	-	100	83.243	Carlito_syrichta
ENSSFOG00015014476	ddx1	99	60.651	ENSTSYG00000037396	-	97	63.278	Carlito_syrichta
ENSSFOG00015014476	ddx1	88	67.183	ENSCAPG00000008906	-	94	67.183	Cavia_aperea
ENSSFOG00015014476	ddx1	68	80.478	ENSCPOG00000032467	-	100	80.478	Cavia_porcellus
ENSSFOG00015014476	ddx1	89	81.164	ENSCPOG00000009816	-	96	81.164	Cavia_porcellus
ENSSFOG00015014476	ddx1	100	83.243	ENSCCAG00000030085	DDX1	100	83.243	Cebus_capucinus
ENSSFOG00015014476	ddx1	100	83.378	ENSCATG00000033924	DDX1	100	83.378	Cercocebus_atys
ENSSFOG00015014476	ddx1	100	83.514	ENSCLAG00000005434	DDX1	100	83.514	Chinchilla_lanigera
ENSSFOG00015014476	ddx1	100	83.378	ENSCSAG00000007883	DDX1	100	83.378	Chlorocebus_sabaeus
ENSSFOG00015014476	ddx1	73	87.857	ENSCHOG00000002171	DDX1	70	87.857	Choloepus_hoffmanni
ENSSFOG00015014476	ddx1	99	78.533	ENSCPBG00000013330	DDX1	99	82.637	Chrysemys_picta_bellii
ENSSFOG00015014476	ddx1	100	64.879	ENSCING00000001176	-	100	65.107	Ciona_intestinalis
ENSSFOG00015014476	ddx1	98	60.519	ENSCSAVG00000003028	-	99	60.519	Ciona_savignyi
ENSSFOG00015014476	ddx1	100	83.514	ENSCANG00000031530	DDX1	100	83.514	Colobus_angolensis_palliatus
ENSSFOG00015014476	ddx1	100	83.378	ENSCGRG00001013025	Ddx1	100	83.378	Cricetulus_griseus_chok1gshd
ENSSFOG00015014476	ddx1	100	83.378	ENSCGRG00000000676	Ddx1	100	83.378	Cricetulus_griseus_crigri
ENSSFOG00015014476	ddx1	99	86.376	ENSCSEG00000002630	ddx1	100	86.376	Cynoglossus_semilaevis
ENSSFOG00015014476	ddx1	99	86.512	ENSCVAG00000020927	ddx1	100	86.512	Cyprinodon_variegatus
ENSSFOG00015014476	ddx1	100	87.703	ENSDARG00000032117	ddx1	100	87.703	Danio_rerio
ENSSFOG00015014476	ddx1	100	83.243	ENSDNOG00000006905	DDX1	100	83.243	Dasypus_novemcinctus
ENSSFOG00015014476	ddx1	100	82.973	ENSDORG00000012847	Ddx1	100	82.973	Dipodomys_ordii
ENSSFOG00015014476	ddx1	98	58.276	FBgn0015075	Ddx1	99	58.550	Drosophila_melanogaster
ENSSFOG00015014476	ddx1	100	75.405	ENSETEG00000014259	DDX1	100	75.405	Echinops_telfairi
ENSSFOG00015014476	ddx1	65	76.907	ENSEBUG00000009800	-	99	76.907	Eptatretus_burgeri
ENSSFOG00015014476	ddx1	100	83.243	ENSEASG00005009335	DDX1	92	83.243	Equus_asinus_asinus
ENSSFOG00015014476	ddx1	94	82.927	ENSECAG00000016396	DDX1	100	82.927	Equus_caballus
ENSSFOG00015014476	ddx1	89	81.544	ENSEEUG00000001606	DDX1	89	81.544	Erinaceus_europaeus
ENSSFOG00015014476	ddx1	100	86.370	ENSELUG00000006743	ddx1	100	86.395	Esox_lucius
ENSSFOG00015014476	ddx1	100	83.378	ENSFCAG00000004680	DDX1	100	83.378	Felis_catus
ENSSFOG00015014476	ddx1	100	84.459	ENSFALG00000008696	DDX1	100	84.459	Ficedula_albicollis
ENSSFOG00015014476	ddx1	100	83.108	ENSFDAG00000021305	DDX1	100	83.108	Fukomys_damarensis
ENSSFOG00015014476	ddx1	100	85.541	ENSFHEG00000008444	ddx1	100	85.559	Fundulus_heteroclitus
ENSSFOG00015014476	ddx1	100	82.773	ENSGMOG00000011300	ddx1	100	82.773	Gadus_morhua
ENSSFOG00015014476	ddx1	100	84.189	ENSGALG00000016461	DDX1	100	84.189	Gallus_gallus
ENSSFOG00015014476	ddx1	100	85.946	ENSGAFG00000004706	ddx1	100	85.946	Gambusia_affinis
ENSSFOG00015014476	ddx1	100	83.784	ENSGACG00000011162	ddx1	100	83.784	Gasterosteus_aculeatus
ENSSFOG00015014476	ddx1	100	84.054	ENSGAGG00000021020	DDX1	100	84.054	Gopherus_agassizii
ENSSFOG00015014476	ddx1	100	83.243	ENSGGOG00000012482	DDX1	100	83.243	Gorilla_gorilla
ENSSFOG00015014476	ddx1	100	86.486	ENSHBUG00000014069	ddx1	100	86.486	Haplochromis_burtoni
ENSSFOG00015014476	ddx1	100	82.568	ENSHGLG00000000801	DDX1	100	82.568	Heterocephalus_glaber_female
ENSSFOG00015014476	ddx1	99	82.561	ENSHGLG00100000711	DDX1	100	82.561	Heterocephalus_glaber_male
ENSSFOG00015014476	ddx1	100	87.027	ENSHCOG00000011492	ddx1	96	87.027	Hippocampus_comes
ENSSFOG00015014476	ddx1	100	86.081	ENSIPUG00000003494	ddx1	100	86.081	Ictalurus_punctatus
ENSSFOG00015014476	ddx1	99	83.379	ENSSTOG00000003977	DDX1	100	83.379	Ictidomys_tridecemlineatus
ENSSFOG00015014476	ddx1	90	79.695	ENSJJAG00000013315	Ddx1	100	79.695	Jaculus_jaculus
ENSSFOG00015014476	ddx1	100	86.622	ENSKMAG00000011340	ddx1	100	86.622	Kryptolebias_marmoratus
ENSSFOG00015014476	ddx1	90	81.957	ENSLBEG00000008692	ddx1	99	81.957	Labrus_bergylta
ENSSFOG00015014476	ddx1	100	83.378	ENSLACG00000010529	DDX1	100	83.378	Latimeria_chalumnae
ENSSFOG00015014476	ddx1	100	86.997	ENSLOCG00000016473	ddx1	100	86.997	Lepisosteus_oculatus
ENSSFOG00015014476	ddx1	99	83.718	ENSLAFG00000002213	DDX1	99	83.718	Loxodonta_africana
ENSSFOG00015014476	ddx1	100	83.378	ENSMFAG00000033987	DDX1	100	83.378	Macaca_fascicularis
ENSSFOG00015014476	ddx1	100	83.378	ENSMMUG00000023437	DDX1	100	83.378	Macaca_mulatta
ENSSFOG00015014476	ddx1	100	83.378	ENSMNEG00000029189	DDX1	100	83.378	Macaca_nemestrina
ENSSFOG00015014476	ddx1	100	83.378	ENSMLEG00000030787	DDX1	100	83.378	Mandrillus_leucophaeus
ENSSFOG00015014476	ddx1	100	86.486	ENSMAMG00000015916	ddx1	100	86.486	Mastacembelus_armatus
ENSSFOG00015014476	ddx1	99	86.567	ENSMZEG00005015207	ddx1	99	86.544	Maylandia_zebra
ENSSFOG00015014476	ddx1	99	80.352	ENSMGAG00000014025	DDX1	100	80.352	Meleagris_gallopavo
ENSSFOG00015014476	ddx1	64	91.111	ENSMAUG00000016156	Ddx1	100	91.111	Mesocricetus_auratus
ENSSFOG00015014476	ddx1	100	83.243	ENSMICG00000001023	DDX1	100	83.243	Microcebus_murinus
ENSSFOG00015014476	ddx1	100	83.243	ENSMOCG00000000257	Ddx1	100	83.243	Microtus_ochrogaster
ENSSFOG00015014476	ddx1	90	85.649	ENSMMOG00000015397	ddx1	99	85.649	Mola_mola
ENSSFOG00015014476	ddx1	99	84.396	ENSMODG00000010275	DDX1	99	84.396	Monodelphis_domestica
ENSSFOG00015014476	ddx1	100	86.892	ENSMALG00000016409	ddx1	100	86.892	Monopterus_albus
ENSSFOG00015014476	ddx1	100	83.378	MGP_CAROLIEiJ_G0017622	Ddx1	100	83.378	Mus_caroli
ENSSFOG00015014476	ddx1	100	83.514	ENSMUSG00000037149	Ddx1	100	83.514	Mus_musculus
ENSSFOG00015014476	ddx1	100	83.649	MGP_PahariEiJ_G0029378	Ddx1	100	83.649	Mus_pahari
ENSSFOG00015014476	ddx1	100	83.514	MGP_SPRETEiJ_G0018464	Ddx1	97	88.235	Mus_spretus
ENSSFOG00015014476	ddx1	100	83.378	ENSMPUG00000013606	DDX1	100	83.378	Mustela_putorius_furo
ENSSFOG00015014476	ddx1	99	82.993	ENSMLUG00000003027	DDX1	98	82.993	Myotis_lucifugus
ENSSFOG00015014476	ddx1	99	83.243	ENSNGAG00000015783	Ddx1	100	83.243	Nannospalax_galili
ENSSFOG00015014476	ddx1	79	82.526	ENSNBRG00000020677	ddx1	94	82.526	Neolamprologus_brichardi
ENSSFOG00015014476	ddx1	100	83.378	ENSNLEG00000014417	DDX1	100	83.378	Nomascus_leucogenys
ENSSFOG00015014476	ddx1	99	82.627	ENSMEUG00000008254	DDX1	99	82.627	Notamacropus_eugenii
ENSSFOG00015014476	ddx1	94	90.000	ENSOPRG00000004290	DDX1	92	90.000	Ochotona_princeps
ENSSFOG00015014476	ddx1	100	83.514	ENSODEG00000000569	DDX1	100	83.514	Octodon_degus
ENSSFOG00015014476	ddx1	100	86.910	ENSONIG00000000513	ddx1	100	86.910	Oreochromis_niloticus
ENSSFOG00015014476	ddx1	76	81.362	ENSOANG00000005450	DDX1	99	81.362	Ornithorhynchus_anatinus
ENSSFOG00015014476	ddx1	100	83.514	ENSOCUG00000007010	DDX1	100	83.514	Oryctolagus_cuniculus
ENSSFOG00015014476	ddx1	100	85.000	ENSORLG00000016709	ddx1	100	85.000	Oryzias_latipes
ENSSFOG00015014476	ddx1	99	84.877	ENSORLG00020003290	ddx1	100	84.877	Oryzias_latipes_hni
ENSSFOG00015014476	ddx1	100	84.595	ENSORLG00015022438	ddx1	100	84.605	Oryzias_latipes_hsok
ENSSFOG00015014476	ddx1	100	80.270	ENSOMEG00000017620	ddx1	100	80.270	Oryzias_melastigma
ENSSFOG00015014476	ddx1	99	83.152	ENSOGAG00000008730	DDX1	100	83.152	Otolemur_garnettii
ENSSFOG00015014476	ddx1	99	83.016	ENSOARG00000016369	DDX1	100	83.016	Ovis_aries
ENSSFOG00015014476	ddx1	100	83.108	ENSPPAG00000027432	DDX1	100	83.108	Pan_paniscus
ENSSFOG00015014476	ddx1	100	83.378	ENSPPRG00000020556	DDX1	100	83.378	Panthera_pardus
ENSSFOG00015014476	ddx1	100	83.378	ENSPTIG00000008267	DDX1	100	83.378	Panthera_tigris_altaica
ENSSFOG00015014476	ddx1	100	83.108	ENSPTRG00000011670	DDX1	100	83.108	Pan_troglodytes
ENSSFOG00015014476	ddx1	100	83.378	ENSPANG00000025185	DDX1	100	83.378	Papio_anubis
ENSSFOG00015014476	ddx1	100	88.514	ENSPKIG00000012466	ddx1	100	88.556	Paramormyrops_kingsleyae
ENSSFOG00015014476	ddx1	54	79.404	ENSPSIG00000012292	DDX1	100	79.404	Pelodiscus_sinensis
ENSSFOG00015014476	ddx1	100	83.919	ENSPMGG00000000782	ddx1	100	83.919	Periophthalmus_magnuspinnatus
ENSSFOG00015014476	ddx1	100	83.378	ENSPEMG00000016389	Ddx1	100	83.378	Peromyscus_maniculatus_bairdii
ENSSFOG00015014476	ddx1	99	75.000	ENSPMAG00000009118	-	100	75.000	Petromyzon_marinus
ENSSFOG00015014476	ddx1	100	85.000	ENSPCIG00000010941	DDX1	100	85.000	Phascolarctos_cinereus
ENSSFOG00015014476	ddx1	88	85.226	ENSPFOG00000006873	-	100	85.226	Poecilia_formosa
ENSSFOG00015014476	ddx1	100	86.081	ENSPFOG00000011921	ddx1	100	86.081	Poecilia_formosa
ENSSFOG00015014476	ddx1	100	86.081	ENSPLAG00000005939	ddx1	100	86.081	Poecilia_latipinna
ENSSFOG00015014476	ddx1	100	86.351	ENSPMEG00000011140	ddx1	100	86.351	Poecilia_mexicana
ENSSFOG00015014476	ddx1	100	86.486	ENSPREG00000011751	ddx1	100	86.486	Poecilia_reticulata
ENSSFOG00015014476	ddx1	100	83.243	ENSPPYG00000012638	DDX1	100	83.243	Pongo_abelii
ENSSFOG00015014476	ddx1	100	71.622	ENSPCAG00000001491	DDX1	100	71.622	Procavia_capensis
ENSSFOG00015014476	ddx1	99	81.199	ENSPCOG00000028185	DDX1	99	81.199	Propithecus_coquereli
ENSSFOG00015014476	ddx1	100	83.514	ENSPVAG00000013618	DDX1	100	83.514	Pteropus_vampyrus
ENSSFOG00015014476	ddx1	100	86.351	ENSPNYG00000013839	ddx1	100	86.351	Pundamilia_nyererei
ENSSFOG00015014476	ddx1	90	89.160	ENSPNAG00000017033	ddx1	97	89.160	Pygocentrus_nattereri
ENSSFOG00015014476	ddx1	100	83.514	ENSRNOG00000006652	Ddx1	100	83.514	Rattus_norvegicus
ENSSFOG00015014476	ddx1	100	82.432	ENSRBIG00000041664	DDX1	100	82.432	Rhinopithecus_bieti
ENSSFOG00015014476	ddx1	100	83.108	ENSRROG00000031167	DDX1	100	83.108	Rhinopithecus_roxellana
ENSSFOG00015014476	ddx1	100	83.378	ENSSBOG00000027577	DDX1	100	83.378	Saimiri_boliviensis_boliviensis
ENSSFOG00015014476	ddx1	99	77.069	ENSSHAG00000009363	DDX1	99	77.069	Sarcophilus_harrisii
ENSSFOG00015014476	ddx1	100	85.405	ENSSMAG00000010094	ddx1	100	85.405	Scophthalmus_maximus
ENSSFOG00015014476	ddx1	100	86.757	ENSSDUG00000012334	ddx1	100	86.757	Seriola_dumerili
ENSSFOG00015014476	ddx1	100	86.351	ENSSLDG00000025345	ddx1	100	86.351	Seriola_lalandi_dorsalis
ENSSFOG00015014476	ddx1	99	75.204	ENSSARG00000004536	DDX1	100	75.204	Sorex_araneus
ENSSFOG00015014476	ddx1	100	83.108	ENSSPUG00000018835	DDX1	100	83.108	Sphenodon_punctatus
ENSSFOG00015014476	ddx1	100	81.081	ENSSPAG00000023554	ddx1	100	81.081	Stegastes_partitus
ENSSFOG00015014476	ddx1	100	83.108	ENSSSCG00000008619	DDX1	100	83.108	Sus_scrofa
ENSSFOG00015014476	ddx1	100	83.919	ENSTGUG00000013096	DDX1	100	83.919	Taeniopygia_guttata
ENSSFOG00015014476	ddx1	99	86.314	ENSTRUG00000015765	ddx1	99	86.314	Takifugu_rubripes
ENSSFOG00015014476	ddx1	100	85.946	ENSTNIG00000016309	ddx1	100	85.946	Tetraodon_nigroviridis
ENSSFOG00015014476	ddx1	99	79.973	ENSTBEG00000008454	DDX1	100	79.973	Tupaia_belangeri
ENSSFOG00015014476	ddx1	100	82.703	ENSTTRG00000005081	DDX1	100	82.703	Tursiops_truncatus
ENSSFOG00015014476	ddx1	77	66.667	ENSUAMG00000017375	DDX1	96	66.667	Ursus_americanus
ENSSFOG00015014476	ddx1	99	83.379	ENSUMAG00000023450	DDX1	100	83.379	Ursus_maritimus
ENSSFOG00015014476	ddx1	85	87.143	ENSVPAG00000007764	DDX1	85	87.143	Vicugna_pacos
ENSSFOG00015014476	ddx1	99	83.265	ENSVVUG00000013085	DDX1	96	83.265	Vulpes_vulpes
ENSSFOG00015014476	ddx1	100	84.324	ENSXETG00000017825	ddx1	100	84.324	Xenopus_tropicalis
ENSSFOG00015014476	ddx1	100	84.203	ENSXCOG00000007082	ddx1	100	84.203	Xiphophorus_couchianus
ENSSFOG00015014476	ddx1	100	86.486	ENSXMAG00000004555	ddx1	100	86.486	Xiphophorus_maculatus