EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014620 (Gene tree)
Gene ID: 108938662
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9267 bases
Position: chrKV411167.1:8998208-9007474
Accession: 108938662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015022718	RRM_1	PF00076.22	3.6e-36	1	3
ENSSFOP00015022718	RRM_1	PF00076.22	3.6e-36	2	3
ENSSFOP00015022718	RRM_1	PF00076.22	3.6e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015022967	-	6399	XM_018759477	ENSSFOP00015022718	546 (aa)	XP_018614993	A0A1W5AGZ1

Gene Model

Click here to download ENSSFOG00015014620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014620	grsf1	78	57.333	ENSSFOG00015015000	hnrnph3	92	47.644
ENSSFOG00015014620	grsf1	78	39.429	ENSSFOG00015022796	hnrnph1l	88	38.177
ENSSFOG00015014620	grsf1	78	44.388	ENSSFOG00015016055	-	82	39.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014620	grsf1	84	47.416	ENSAPOG00000012487	grsf1	82	47.416	Acanthochromis_polyacanthus
ENSSFOG00015014620	grsf1	85	45.294	ENSACIG00000005871	grsf1	90	45.087	Amphilophus_citrinellus
ENSSFOG00015014620	grsf1	84	46.547	ENSAOCG00000017462	-	82	46.547	Amphiprion_ocellaris
ENSSFOG00015014620	grsf1	84	46.407	ENSAPEG00000007240	-	82	46.407	Amphiprion_percula
ENSSFOG00015014620	grsf1	80	48.387	ENSATEG00000007185	grsf1	79	48.387	Anabas_testudineus
ENSSFOG00015014620	grsf1	83	47.006	ENSACLG00000003685	-	83	47.006	Astatotilapia_calliptera
ENSSFOG00015014620	grsf1	95	39.157	ENSAMXG00000012270	grsf1	99	37.685	Astyanax_mexicanus
ENSSFOG00015014620	grsf1	87	42.453	ENSCSEG00000019209	-	93	42.767	Cynoglossus_semilaevis
ENSSFOG00015014620	grsf1	85	46.087	ENSCVAG00000004476	grsf1	88	46.087	Cyprinodon_variegatus
ENSSFOG00015014620	grsf1	86	48.529	ENSDARG00000053021	grsf1	81	48.529	Danio_rerio
ENSSFOG00015014620	grsf1	88	47.436	ENSFHEG00000013358	-	85	45.133	Fundulus_heteroclitus
ENSSFOG00015014620	grsf1	78	61.818	ENSGMOG00000014047	grsf1	99	61.818	Gadus_morhua
ENSSFOG00015014620	grsf1	83	46.526	ENSGAFG00000004496	grsf1	82	46.526	Gambusia_affinis
ENSSFOG00015014620	grsf1	79	44.681	ENSGACG00000014447	grsf1	98	44.681	Gasterosteus_aculeatus
ENSSFOG00015014620	grsf1	83	47.590	ENSHBUG00000006284	grsf1	82	47.590	Haplochromis_burtoni
ENSSFOG00015014620	grsf1	84	43.161	ENSHCOG00000007715	-	84	43.161	Hippocampus_comes
ENSSFOG00015014620	grsf1	84	48.318	ENSIPUG00000010533	grsf1	82	48.318	Ictalurus_punctatus
ENSSFOG00015014620	grsf1	83	45.482	ENSKMAG00000004528	grsf1	79	45.482	Kryptolebias_marmoratus
ENSSFOG00015014620	grsf1	79	41.695	ENSLBEG00000018100	grsf1	99	41.892	Labrus_bergylta
ENSSFOG00015014620	grsf1	83	46.084	ENSMAMG00000002627	grsf1	83	46.084	Mastacembelus_armatus
ENSSFOG00015014620	grsf1	83	47.006	ENSMZEG00005020633	-	83	47.006	Maylandia_zebra
ENSSFOG00015014620	grsf1	80	52.145	ENSMMOG00000014231	grsf1	89	48.955	Mola_mola
ENSSFOG00015014620	grsf1	83	43.931	ENSMALG00000000251	grsf1	84	43.931	Monopterus_albus
ENSSFOG00015014620	grsf1	83	46.108	ENSNBRG00000017774	grsf1	80	46.108	Neolamprologus_brichardi
ENSSFOG00015014620	grsf1	83	46.707	ENSONIG00000014119	grsf1	99	43.429	Oreochromis_niloticus
ENSSFOG00015014620	grsf1	81	49.049	ENSORLG00000030211	grsf1	80	47.097	Oryzias_latipes
ENSSFOG00015014620	grsf1	84	45.122	ENSORLG00020014383	grsf1	83	45.897	Oryzias_latipes_hni
ENSSFOG00015014620	grsf1	81	46.278	ENSORLG00015006520	grsf1	81	46.278	Oryzias_latipes_hsok
ENSSFOG00015014620	grsf1	81	47.097	ENSOMEG00000009181	grsf1	82	47.267	Oryzias_melastigma
ENSSFOG00015014620	grsf1	86	54.949	ENSPKIG00000019432	grsf1	84	51.873	Paramormyrops_kingsleyae
ENSSFOG00015014620	grsf1	82	45.672	ENSPMGG00000013654	grsf1	91	45.672	Periophthalmus_magnuspinnatus
ENSSFOG00015014620	grsf1	83	43.620	ENSPFOG00000006122	grsf1	82	43.620	Poecilia_formosa
ENSSFOG00015014620	grsf1	83	44.144	ENSPLAG00000020977	grsf1	82	44.144	Poecilia_latipinna
ENSSFOG00015014620	grsf1	83	44.214	ENSPMEG00000012485	grsf1	82	44.214	Poecilia_mexicana
ENSSFOG00015014620	grsf1	83	45.357	ENSPREG00000013383	grsf1	82	43.881	Poecilia_reticulata
ENSSFOG00015014620	grsf1	83	47.024	ENSPNYG00000005379	grsf1	82	47.024	Pundamilia_nyererei
ENSSFOG00015014620	grsf1	99	42.958	ENSPNAG00000014912	grsf1	100	42.958	Pygocentrus_nattereri
ENSSFOG00015014620	grsf1	81	47.302	ENSSMAG00000014181	grsf1	68	48.232	Scophthalmus_maximus
ENSSFOG00015014620	grsf1	82	45.741	ENSSDUG00000009397	-	97	45.566	Seriola_dumerili
ENSSFOG00015014620	grsf1	86	44.898	ENSSLDG00000025494	grsf1	97	44.058	Seriola_lalandi_dorsalis
ENSSFOG00015014620	grsf1	83	46.037	ENSSPAG00000023296	grsf1	81	46.037	Stegastes_partitus
ENSSFOG00015014620	grsf1	85	45.697	ENSTRUG00000015354	grsf1	85	45.697	Takifugu_rubripes
ENSSFOG00015014620	grsf1	77	44.898	ENSTNIG00000015350	-	94	44.898	Tetraodon_nigroviridis
ENSSFOG00015014620	grsf1	83	44.985	ENSXMAG00000029710	grsf1	82	44.985	Xiphophorus_maculatus