EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014706 (Gene tree)
Gene ID: 108928632
Gene Symbol: pcbp3 (1 of many)
Alias: zgc:109966
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12419 bases
Position: chrKV410788.1:867702-880120
Accession: 108928632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015022886	KH_1	PF00013.29	6.6e-54	1	3
ENSSFOP00015022886	KH_1	PF00013.29	6.6e-54	2	3
ENSSFOP00015022886	KH_1	PF00013.29	6.6e-54	3	3
ENSSFOP00015022910	KH_1	PF00013.29	1.3e-43	1	2
ENSSFOP00015022910	KH_1	PF00013.29	1.3e-43	2	2
ENSSFOP00015022886	KH_2	PF07650.17	2.7e-14	1	1
ENSSFOP00015022910	KH_2	PF07650.17	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015023160	-	996	-	ENSSFOP00015022910	331 (aa)	-	-
ENSSFOT00015023136	-	4693	XM_018742657	ENSSFOP00015022886	349 (aa)	XP_018598173	A0A1W4ZCB9

Gene Model

Click here to download ENSSFOG00015014706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014706	pcbp3	63	39.706	ENSSFOG00015004204	nova2	55	39.706
ENSSFOG00015014706	pcbp3	94	73.860	ENSSFOG00015017796	PCBP2	98	72.000
ENSSFOG00015014706	pcbp3	69	55.556	ENSSFOG00015023730	hnrpkl	58	47.297
ENSSFOG00015014706	pcbp3	64	41.176	ENSSFOG00015018719	khsrp	56	41.176
ENSSFOG00015014706	pcbp3	94	33.803	ENSSFOG00015014056	igf2bp3	61	33.803
ENSSFOG00015014706	pcbp3	100	90.544	ENSSFOG00015010205	pcbp3	100	95.181
ENSSFOG00015014706	pcbp3	71	53.623	ENSSFOG00015009351	hnrnpk	59	47.297
ENSSFOG00015014706	pcbp3	66	39.683	ENSSFOG00015011098	fubp3	69	39.683
ENSSFOG00015014706	pcbp3	91	34.810	ENSSFOG00015007770	igf2bp2b	60	34.810
ENSSFOG00015014706	pcbp3	88	41.270	ENSSFOG00015012455	-	60	41.270
ENSSFOG00015014706	pcbp3	91	33.099	ENSSFOG00015002540	igf2bp1	59	33.099
ENSSFOG00015014706	pcbp3	97	73.156	ENSSFOG00015013231	PCBP2	96	73.214
ENSSFOG00015014706	pcbp3	68	42.647	ENSSFOG00015010767	KHSRP	58	42.647
ENSSFOG00015014706	pcbp3	57	40.741	ENSSFOG00015010909	-	72	40.741
ENSSFOG00015014706	pcbp3	98	58.739	ENSSFOG00015012075	PCBP4	76	58.739
ENSSFOG00015014706	pcbp3	84	35.870	ENSSFOG00015010213	fubp1	50	34.694
ENSSFOG00015014706	pcbp3	93	79.321	ENSSFOG00015007118	-	93	79.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014706	pcbp3	95	86.787	ENSAPOG00000020003	pcbp3	86	86.787	Acanthochromis_polyacanthus
ENSSFOG00015014706	pcbp3	100	90.000	ENSAPOG00000016582	-	100	90.000	Acanthochromis_polyacanthus
ENSSFOG00015014706	pcbp3	93	87.834	ENSAMEG00000001697	-	96	87.834	Ailuropoda_melanoleuca
ENSSFOG00015014706	pcbp3	95	88.323	ENSACIG00000002739	-	97	88.323	Amphilophus_citrinellus
ENSSFOG00015014706	pcbp3	100	92.857	ENSACIG00000010933	pcbp3	100	92.857	Amphilophus_citrinellus
ENSSFOG00015014706	pcbp3	97	87.647	ENSAOCG00000008592	-	100	87.647	Amphiprion_ocellaris
ENSSFOG00015014706	pcbp3	84	86.230	ENSAOCG00000007806	-	97	86.230	Amphiprion_ocellaris
ENSSFOG00015014706	pcbp3	100	94.602	ENSAPEG00000008011	pcbp3	100	94.602	Amphiprion_percula
ENSSFOG00015014706	pcbp3	95	88.024	ENSAPEG00000005209	-	97	88.024	Amphiprion_percula
ENSSFOG00015014706	pcbp3	95	93.093	ENSATEG00000015787	-	100	93.093	Anabas_testudineus
ENSSFOG00015014706	pcbp3	95	87.425	ENSATEG00000009833	-	97	87.425	Anabas_testudineus
ENSSFOG00015014706	pcbp3	93	85.337	ENSAPLG00000002975	-	95	85.337	Anas_platyrhynchos
ENSSFOG00015014706	pcbp3	98	77.929	ENSAPLG00000008951	-	82	77.929	Anas_platyrhynchos
ENSSFOG00015014706	pcbp3	93	90.490	ENSACAG00000004607	-	96	90.490	Anolis_carolinensis
ENSSFOG00015014706	pcbp3	93	87.423	ENSACAG00000009819	-	95	87.423	Anolis_carolinensis
ENSSFOG00015014706	pcbp3	91	88.148	ENSANAG00000030702	-	96	88.148	Aotus_nancymaae
ENSSFOG00015014706	pcbp3	100	89.429	ENSACLG00000003801	-	100	89.429	Astatotilapia_calliptera
ENSSFOG00015014706	pcbp3	100	94.318	ENSACLG00000011835	pcbp3	100	94.318	Astatotilapia_calliptera
ENSSFOG00015014706	pcbp3	93	67.378	ENSAMXG00000001760	zgc:110045	73	67.378	Astyanax_mexicanus
ENSSFOG00015014706	pcbp3	95	85.241	ENSAMXG00000013588	-	100	85.241	Astyanax_mexicanus
ENSSFOG00015014706	pcbp3	100	96.857	ENSAMXG00000003440	pcbp3	100	96.857	Astyanax_mexicanus
ENSSFOG00015014706	pcbp3	88	87.302	ENSCAFG00020019472	-	81	87.302	Canis_lupus_dingo
ENSSFOG00015014706	pcbp3	93	89.297	ENSCSAG00000007440	-	87	89.297	Chlorocebus_sabaeus
ENSSFOG00015014706	pcbp3	98	87.678	ENSCPBG00000000733	-	72	87.678	Chrysemys_picta_bellii
ENSSFOG00015014706	pcbp3	93	89.297	ENSCPBG00000012151	-	96	84.150	Chrysemys_picta_bellii
ENSSFOG00015014706	pcbp3	95	72.205	ENSCSEG00000016984	-	77	93.299	Cynoglossus_semilaevis
ENSSFOG00015014706	pcbp3	95	85.886	ENSCSEG00000000822	pcbp3	96	89.316	Cynoglossus_semilaevis
ENSSFOG00015014706	pcbp3	100	94.872	ENSCVAG00000014482	pcbp3	100	94.872	Cyprinodon_variegatus
ENSSFOG00015014706	pcbp3	100	89.714	ENSCVAG00000005262	-	100	89.714	Cyprinodon_variegatus
ENSSFOG00015014706	pcbp3	100	96.857	ENSDARG00000054378	pcbp3	100	96.857	Danio_rerio
ENSSFOG00015014706	pcbp3	93	75.841	ENSETEG00000015988	-	95	75.841	Echinops_telfairi
ENSSFOG00015014706	pcbp3	85	66.890	ENSEBUG00000016192	pcbp3	99	68.041	Eptatretus_burgeri
ENSSFOG00015014706	pcbp3	71	66.667	ENSEBUG00000005495	pcbp3	70	66.667	Eptatretus_burgeri
ENSSFOG00015014706	pcbp3	95	75.000	ENSEBUG00000007485	-	92	73.967	Eptatretus_burgeri
ENSSFOG00015014706	pcbp3	100	89.714	ENSELUG00000001560	-	100	82.873	Esox_lucius
ENSSFOG00015014706	pcbp3	100	94.618	ENSELUG00000003521	pcbp3	100	94.618	Esox_lucius
ENSSFOG00015014706	pcbp3	98	78.202	ENSFALG00000004411	-	77	78.202	Ficedula_albicollis
ENSSFOG00015014706	pcbp3	93	89.264	ENSFALG00000003949	-	95	89.264	Ficedula_albicollis
ENSSFOG00015014706	pcbp3	97	85.546	ENSFHEG00000016615	pcbp3	97	85.546	Fundulus_heteroclitus
ENSSFOG00015014706	pcbp3	95	87.425	ENSFHEG00000006539	-	97	87.425	Fundulus_heteroclitus
ENSSFOG00015014706	pcbp3	94	66.857	ENSGMOG00000008611	-	99	66.857	Gadus_morhua
ENSSFOG00015014706	pcbp3	95	75.211	ENSGMOG00000011992	pcbp3	96	75.211	Gadus_morhua
ENSSFOG00015014706	pcbp3	93	87.654	ENSGALG00000013155	-	97	85.185	Gallus_gallus
ENSSFOG00015014706	pcbp3	93	88.439	ENSGALG00000004394	-	96	88.439	Gallus_gallus
ENSSFOG00015014706	pcbp3	100	89.714	ENSGAFG00000010274	-	100	89.714	Gambusia_affinis
ENSSFOG00015014706	pcbp3	95	91.291	ENSGAFG00000011430	pcbp3	96	91.291	Gambusia_affinis
ENSSFOG00015014706	pcbp3	96	83.616	ENSGACG00000002266	-	97	83.616	Gasterosteus_aculeatus
ENSSFOG00015014706	pcbp3	95	81.818	ENSGACG00000014955	-	97	81.818	Gasterosteus_aculeatus
ENSSFOG00015014706	pcbp3	94	81.538	ENSGAGG00000000271	-	100	81.661	Gopherus_agassizii
ENSSFOG00015014706	pcbp3	77	88.095	ENSGAGG00000006956	-	87	88.095	Gopherus_agassizii
ENSSFOG00015014706	pcbp3	100	94.872	ENSHBUG00000010697	pcbp3	100	94.872	Haplochromis_burtoni
ENSSFOG00015014706	pcbp3	100	89.429	ENSHBUG00000021782	-	100	89.429	Haplochromis_burtoni
ENSSFOG00015014706	pcbp3	100	95.143	ENSHCOG00000017868	pcbp3	100	95.143	Hippocampus_comes
ENSSFOG00015014706	pcbp3	95	86.186	ENSHCOG00000006067	-	97	86.186	Hippocampus_comes
ENSSFOG00015014706	pcbp3	95	96.707	ENSIPUG00000006238	pcbp3	97	96.707	Ictalurus_punctatus
ENSSFOG00015014706	pcbp3	100	88.857	ENSKMAG00000018530	-	100	88.857	Kryptolebias_marmoratus
ENSSFOG00015014706	pcbp3	100	94.602	ENSKMAG00000003046	pcbp3	100	94.602	Kryptolebias_marmoratus
ENSSFOG00015014706	pcbp3	100	78.248	ENSLBEG00000006542	-	100	79.154	Labrus_bergylta
ENSSFOG00015014706	pcbp3	96	85.714	ENSLBEG00000006201	pcbp3	96	85.714	Labrus_bergylta
ENSSFOG00015014706	pcbp3	94	88.319	ENSLACG00000010386	pcbp3	74	88.319	Latimeria_chalumnae
ENSSFOG00015014706	pcbp3	98	77.747	ENSLACG00000010804	zgc:110045	77	77.747	Latimeria_chalumnae
ENSSFOG00015014706	pcbp3	93	96.636	ENSLOCG00000009369	pcbp3	96	96.636	Lepisosteus_oculatus
ENSSFOG00015014706	pcbp3	93	87.117	ENSLOCG00000005058	zgc:110045	80	87.117	Lepisosteus_oculatus
ENSSFOG00015014706	pcbp3	95	87.048	ENSMAMG00000022336	pcbp3	93	87.048	Mastacembelus_armatus
ENSSFOG00015014706	pcbp3	95	87.126	ENSMAMG00000011620	-	97	87.126	Mastacembelus_armatus
ENSSFOG00015014706	pcbp3	100	92.571	ENSMZEG00005008993	pcbp3	100	92.571	Maylandia_zebra
ENSSFOG00015014706	pcbp3	100	85.960	ENSMZEG00005014882	-	100	86.080	Maylandia_zebra
ENSSFOG00015014706	pcbp3	94	80.172	ENSMGAG00000001883	-	96	80.172	Meleagris_gallopavo
ENSSFOG00015014706	pcbp3	98	78.202	ENSMGAG00000006794	-	77	78.202	Meleagris_gallopavo
ENSSFOG00015014706	pcbp3	95	86.228	ENSMMOG00000000730	pcbp3	88	86.228	Mola_mola
ENSSFOG00015014706	pcbp3	95	86.826	ENSMMOG00000005216	-	97	86.826	Mola_mola
ENSSFOG00015014706	pcbp3	71	86.449	ENSMODG00000027884	-	93	86.449	Monodelphis_domestica
ENSSFOG00015014706	pcbp3	100	92.308	ENSMALG00000000691	pcbp3	100	92.308	Monopterus_albus
ENSSFOG00015014706	pcbp3	93	78.324	ENSMPUG00000001779	-	88	78.324	Mustela_putorius_furo
ENSSFOG00015014706	pcbp3	100	93.123	ENSNBRG00000016409	-	100	93.123	Neolamprologus_brichardi
ENSSFOG00015014706	pcbp3	100	88.202	ENSNBRG00000016714	-	100	88.202	Neolamprologus_brichardi
ENSSFOG00015014706	pcbp3	93	88.663	ENSOPRG00000003431	-	99	88.663	Ochotona_princeps
ENSSFOG00015014706	pcbp3	95	90.625	ENSONIG00000012122	-	98	90.625	Oreochromis_niloticus
ENSSFOG00015014706	pcbp3	95	89.222	ENSONIG00000004611	-	97	89.222	Oreochromis_niloticus
ENSSFOG00015014706	pcbp3	93	89.877	ENSOCUG00000002696	-	87	89.877	Oryctolagus_cuniculus
ENSSFOG00015014706	pcbp3	95	89.189	ENSORLG00000000059	pcbp3	100	89.189	Oryzias_latipes
ENSSFOG00015014706	pcbp3	99	89.112	ENSORLG00000022739	-	99	89.112	Oryzias_latipes
ENSSFOG00015014706	pcbp3	99	88.825	ENSORLG00020006124	-	99	88.825	Oryzias_latipes_hni
ENSSFOG00015014706	pcbp3	95	89.189	ENSORLG00020012671	pcbp3	97	89.189	Oryzias_latipes_hni
ENSSFOG00015014706	pcbp3	95	89.189	ENSORLG00015000429	pcbp3	97	89.189	Oryzias_latipes_hsok
ENSSFOG00015014706	pcbp3	99	89.112	ENSORLG00015008051	-	99	89.112	Oryzias_latipes_hsok
ENSSFOG00015014706	pcbp3	87	87.829	ENSOMEG00000020811	pcbp3	97	87.829	Oryzias_melastigma
ENSSFOG00015014706	pcbp3	95	89.222	ENSOMEG00000020162	-	97	89.222	Oryzias_melastigma
ENSSFOG00015014706	pcbp3	93	84.091	ENSOGAG00000008044	-	96	84.091	Otolemur_garnettii
ENSSFOG00015014706	pcbp3	100	89.971	ENSPKIG00000019329	pcbp3	100	89.971	Paramormyrops_kingsleyae
ENSSFOG00015014706	pcbp3	76	79.524	ENSPKIG00000020913	-	91	79.524	Paramormyrops_kingsleyae
ENSSFOG00015014706	pcbp3	94	81.538	ENSPSIG00000008350	-	72	81.538	Pelodiscus_sinensis
ENSSFOG00015014706	pcbp3	93	76.453	ENSPSIG00000014970	-	95	77.035	Pelodiscus_sinensis
ENSSFOG00015014706	pcbp3	100	94.857	ENSPMGG00000022383	pcbp3	100	94.857	Periophthalmus_magnuspinnatus
ENSSFOG00015014706	pcbp3	70	88.298	ENSPMAG00000004637	-	97	88.298	Petromyzon_marinus
ENSSFOG00015014706	pcbp3	97	68.421	ENSPMAG00000004551	pcbp3	91	68.421	Petromyzon_marinus
ENSSFOG00015014706	pcbp3	93	95.719	ENSPCIG00000028092	-	96	95.719	Phascolarctos_cinereus
ENSSFOG00015014706	pcbp3	94	84.503	ENSPLAG00000004074	-	89	84.503	Poecilia_latipinna
ENSSFOG00015014706	pcbp3	100	80.201	ENSPLAG00000011449	pcbp3	100	80.201	Poecilia_latipinna
ENSSFOG00015014706	pcbp3	100	87.966	ENSPMEG00000006653	-	100	87.966	Poecilia_mexicana
ENSSFOG00015014706	pcbp3	100	93.785	ENSPMEG00000021239	pcbp3	100	93.785	Poecilia_mexicana
ENSSFOG00015014706	pcbp3	95	87.126	ENSPREG00000020585	-	97	87.126	Poecilia_reticulata
ENSSFOG00015014706	pcbp3	95	84.776	ENSPREG00000015736	pcbp3	99	84.776	Poecilia_reticulata
ENSSFOG00015014706	pcbp3	95	87.087	ENSPNYG00000012326	pcbp3	95	87.087	Pundamilia_nyererei
ENSSFOG00015014706	pcbp3	95	86.826	ENSPNYG00000013205	-	97	86.826	Pundamilia_nyererei
ENSSFOG00015014706	pcbp3	100	93.429	ENSPNAG00000008541	-	100	93.429	Pygocentrus_nattereri
ENSSFOG00015014706	pcbp3	95	90.120	ENSPNAG00000015104	pcbp3	97	90.120	Pygocentrus_nattereri
ENSSFOG00015014706	pcbp3	93	89.297	ENSRNOG00000001245	Pcbp3	95	89.297	Rattus_norvegicus
ENSSFOG00015014706	pcbp3	93	80.447	ENSRBIG00000028177	-	96	80.447	Rhinopithecus_bieti
ENSSFOG00015014706	pcbp3	93	84.286	ENSSHAG00000007890	-	96	84.104	Sarcophilus_harrisii
ENSSFOG00015014706	pcbp3	100	89.143	ENSSMAG00000003135	-	100	89.143	Scophthalmus_maximus
ENSSFOG00015014706	pcbp3	95	86.787	ENSSMAG00000011929	pcbp3	97	86.787	Scophthalmus_maximus
ENSSFOG00015014706	pcbp3	100	88.539	ENSSDUG00000008502	-	100	88.539	Seriola_dumerili
ENSSFOG00015014706	pcbp3	95	92.814	ENSSDUG00000011608	pcbp3	99	92.814	Seriola_dumerili
ENSSFOG00015014706	pcbp3	100	90.000	ENSSLDG00000020161	-	100	90.000	Seriola_lalandi_dorsalis
ENSSFOG00015014706	pcbp3	95	92.814	ENSSLDG00000008518	pcbp3	99	92.814	Seriola_lalandi_dorsalis
ENSSFOG00015014706	pcbp3	91	85.764	ENSSPUG00000013214	-	91	85.764	Sphenodon_punctatus
ENSSFOG00015014706	pcbp3	84	86.230	ENSSPAG00000004190	-	97	86.230	Stegastes_partitus
ENSSFOG00015014706	pcbp3	100	82.571	ENSSPAG00000023341	-	100	82.571	Stegastes_partitus
ENSSFOG00015014706	pcbp3	93	83.180	ENSTGUG00000008158	-	96	83.180	Taeniopygia_guttata
ENSSFOG00015014706	pcbp3	93	80.692	ENSTGUG00000003316	-	96	80.692	Taeniopygia_guttata
ENSSFOG00015014706	pcbp3	91	89.369	ENSTRUG00000006280	-	89	89.369	Takifugu_rubripes
ENSSFOG00015014706	pcbp3	100	89.429	ENSTRUG00000013604	pcbp3	100	89.429	Takifugu_rubripes
ENSSFOG00015014706	pcbp3	93	88.728	ENSTTRG00000015075	-	96	88.728	Tursiops_truncatus
ENSSFOG00015014706	pcbp3	93	82.421	ENSXETG00000011483	pcbp1	96	82.421	Xenopus_tropicalis
ENSSFOG00015014706	pcbp3	94	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSSFOG00015014706	pcbp3	100	93.785	ENSXCOG00000020481	pcbp3	100	93.785	Xiphophorus_couchianus
ENSSFOG00015014706	pcbp3	100	94.602	ENSXMAG00000008175	pcbp3	100	94.602	Xiphophorus_maculatus
ENSSFOG00015014706	pcbp3	100	90.000	ENSXMAG00000028711	-	100	90.000	Xiphophorus_maculatus