EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015014718 (Gene tree)
Gene ID
108930093
Gene Symbol
pabpn1 (1 of many)
Alias
-
Full Name
polyadenylate-binding protein 2-B-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
11331 bases
Position
chrKV410910.1:1092483-1103813
Accession
108930093
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015022877RRM_1PF00076.221.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015023127-5537XM_018745149ENSSFOP00015022877232 (aa)XP_018600665A0A1W4ZA96
Gene Model
Click here to download ENSSFOG00015014718's gene model file
Pathways
Pathway IDPathway NameSource
sfm03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014718's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015014718pabpn110090.987ENSSFOG00015012565pabpn110090.987
ENSSFOG00015014718pabpn16174.648ENSSFOG00015015833pabpn1l7770.060
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015014718pabpn19972.103ENSG00000258643BCL2L2-PABPN17072.103Homo_sapiens
ENSSFOG00015014718pabpn18682.039ENSG00000100836PABPN19481.548Homo_sapiens
ENSSFOG00015014718pabpn110096.552ENSAPOG00000016425pabpn110096.552Acanthochromis_polyacanthus
ENSSFOG00015014718pabpn18183.684ENSAMEG00000007048BCL2L2-PABPN110083.684Ailuropoda_melanoleuca
ENSSFOG00015014718pabpn19495.023ENSACIG00000021744pabpn19495.152Amphilophus_citrinellus
ENSSFOG00015014718pabpn110096.552ENSAOCG00000015805pabpn110096.552Amphiprion_ocellaris
ENSSFOG00015014718pabpn110096.552ENSAPEG00000009623pabpn110096.552Amphiprion_percula
ENSSFOG00015014718pabpn110096.983ENSATEG00000020531pabpn110096.983Anabas_testudineus
ENSSFOG00015014718pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSSFOG00015014718pabpn18483.333ENSANAG00000024513-8474.477Aotus_nancymaae
ENSSFOG00015014718pabpn19494.595ENSACLG00000016374pabpn17594.419Astatotilapia_calliptera
ENSSFOG00015014718pabpn110096.996ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSSFOG00015014718pabpn18183.854ENSBTAG00000053753-7183.854Bos_taurus
ENSSFOG00015014718pabpn18476.020ENSBTAG00000050594-7474.519Bos_taurus
ENSSFOG00015014718pabpn18483.333ENSBTAG00000006884PABPN18669.318Bos_taurus
ENSSFOG00015014718pabpn16856.522WBGene00003904pabp-28454.651Caenorhabditis_elegans
ENSSFOG00015014718pabpn19975.536ENSCJAG00000007960-8475.966Callithrix_jacchus
ENSSFOG00015014718pabpn17179.762ENSCJAG00000004407-8479.762Callithrix_jacchus
ENSSFOG00015014718pabpn18682.039ENSCAFG00000011482PABPN18670.455Canis_familiaris
ENSSFOG00015014718pabpn18682.039ENSCAFG00020006651-8670.076Canis_lupus_dingo
ENSSFOG00015014718pabpn18682.039ENSCAFG00020007298-8670.076Canis_lupus_dingo
ENSSFOG00015014718pabpn18682.039ENSCHIG00000012184PABPN18670.076Capra_hircus
ENSSFOG00015014718pabpn19972.103ENSTSYG00000033996BCL2L2-PABPN19481.548Carlito_syrichta
ENSSFOG00015014718pabpn15980.576ENSCAPG00000009461-9183.594Cavia_aperea
ENSSFOG00015014718pabpn18681.553ENSCPOG00000025574PABPN16880.861Cavia_porcellus
ENSSFOG00015014718pabpn19975.536ENSCCAG00000033954BCL2L2-PABPN18475.966Cebus_capucinus
ENSSFOG00015014718pabpn19975.536ENSCATG00000038536BCL2L2-PABPN18475.966Cercocebus_atys
ENSSFOG00015014718pabpn16580.795ENSCLAG00000012423PABPN15680.795Chinchilla_lanigera
ENSSFOG00015014718pabpn18680.583ENSCSAG00000016036PABPN18668.939Chlorocebus_sabaeus
ENSSFOG00015014718pabpn18972.381ENSCHOG00000004798BCL2L2-PABPN19270.455Choloepus_hoffmanni
ENSSFOG00015014718pabpn17183.929ENSCPBG00000026060-9483.929Chrysemys_picta_bellii
ENSSFOG00015014718pabpn19062.085ENSCING00000012468-8961.611Ciona_intestinalis
ENSSFOG00015014718pabpn17662.921ENSCSAVG00000002001-9360.479Ciona_savignyi
ENSSFOG00015014718pabpn18570.707ENSCANG00000030980-8763.445Colobus_angolensis_palliatus
ENSSFOG00015014718pabpn19972.103ENSCANG00000009750BCL2L2-PABPN19481.548Colobus_angolensis_palliatus
ENSSFOG00015014718pabpn18682.524ENSCGRG00001019696Pabpn19482.143Cricetulus_griseus_chok1gshd
ENSSFOG00015014718pabpn16391.837ENSCGRG00000011102Pabpn19191.837Cricetulus_griseus_crigri
ENSSFOG00015014718pabpn110095.690ENSCSEG00000008774pabpn110095.690Cynoglossus_semilaevis
ENSSFOG00015014718pabpn110091.880ENSCVAG00000003152pabpn110093.590Cyprinodon_variegatus
ENSSFOG00015014718pabpn18155.615ENSDARG00000087996pabpn1l7966.406Danio_rerio
ENSSFOG00015014718pabpn110096.983ENSDARG00000045373pabpn110097.273Danio_rerio
ENSSFOG00015014718pabpn18682.039ENSDNOG00000023682PABPN18670.076Dasypus_novemcinctus
ENSSFOG00015014718pabpn18681.068ENSDORG00000028966-8668.939Dipodomys_ordii
ENSSFOG00015014718pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSSFOG00015014718pabpn110058.824FBgn0005648Pabp29260.465Drosophila_melanogaster
ENSSFOG00015014718pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSSFOG00015014718pabpn18682.039ENSEASG00005011716PABPN18670.076Equus_asinus_asinus
ENSSFOG00015014718pabpn18581.373ENSECAG00000011652PABPN18170.248Equus_caballus
ENSSFOG00015014718pabpn18680.097ENSEEUG00000012973-7175.598Erinaceus_europaeus
ENSSFOG00015014718pabpn110093.671ENSELUG00000022654pabpn110093.671Esox_lucius
ENSSFOG00015014718pabpn18682.039ENSFCAG00000031922PABPN18670.076Felis_catus
ENSSFOG00015014718pabpn17180.952ENSFDAG00000018381BCL2L2-PABPN19480.952Fukomys_damarensis
ENSSFOG00015014718pabpn110093.534ENSFHEG00000007215pabpn110093.534Fundulus_heteroclitus
ENSSFOG00015014718pabpn19595.928ENSGMOG00000003922pabpn17895.928Gadus_morhua
ENSSFOG00015014718pabpn18382.828ENSGALG00000052930-6181.991Gallus_gallus
ENSSFOG00015014718pabpn110095.726ENSGAFG00000017099pabpn110095.726Gambusia_affinis
ENSSFOG00015014718pabpn19595.455ENSGACG00000002167pabpn110090.283Gasterosteus_aculeatus
ENSSFOG00015014718pabpn19465.385ENSGGOG00000025919-9867.785Gorilla_gorilla
ENSSFOG00015014718pabpn18969.231ENSGGOG00000039675-9165.417Gorilla_gorilla
ENSSFOG00015014718pabpn19975.536ENSGGOG00000022683-8475.966Gorilla_gorilla
ENSSFOG00015014718pabpn110096.121ENSHBUG00000019523pabpn110096.121Haplochromis_burtoni
ENSSFOG00015014718pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSSFOG00015014718pabpn19168.396ENSHGLG00000018588-7072.539Heterocephalus_glaber_female
ENSSFOG00015014718pabpn18681.553ENSHGLG00000002927-9290.476Heterocephalus_glaber_female
ENSSFOG00015014718pabpn19168.396ENSHGLG00100015565-8765.066Heterocephalus_glaber_male
ENSSFOG00015014718pabpn17170.060ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSSFOG00015014718pabpn19471.041ENSHGLG00100006673-9290.476Heterocephalus_glaber_male
ENSSFOG00015014718pabpn110093.103ENSHCOG00000004655pabpn110090.517Hippocampus_comes
ENSSFOG00015014718pabpn110090.517ENSIPUG00000000180-9990.517Ictalurus_punctatus
ENSSFOG00015014718pabpn110098.276ENSIPUG00000008085PABPN110098.276Ictalurus_punctatus
ENSSFOG00015014718pabpn17181.548ENSSTOG00000029847BCL2L2-PABPN19481.548Ictidomys_tridecemlineatus
ENSSFOG00015014718pabpn17181.548ENSJJAG00000023507Gm205219481.548Jaculus_jaculus
ENSSFOG00015014718pabpn110094.850ENSKMAG00000018748pabpn110093.133Kryptolebias_marmoratus
ENSSFOG00015014718pabpn110096.983ENSLBEG00000027266pabpn110096.983Labrus_bergylta
ENSSFOG00015014718pabpn17587.640ENSLACG00000000646pabpn17986.111Latimeria_chalumnae
ENSSFOG00015014718pabpn19593.636ENSLOCG00000000796pabpn17793.396Lepisosteus_oculatus
ENSSFOG00015014718pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSSFOG00015014718pabpn16581.579ENSLAFG00000031227-10081.579Loxodonta_africana
ENSSFOG00015014718pabpn16173.944ENSMFAG00000031355-9973.944Macaca_fascicularis
ENSSFOG00015014718pabpn19972.103ENSMFAG00000032183BCL2L2-PABPN19481.548Macaca_fascicularis
ENSSFOG00015014718pabpn19972.103ENSMMUG00000014747BCL2L2-PABPN110080.952Macaca_mulatta
ENSSFOG00015014718pabpn18667.317ENSMMUG00000048382-8956.877Macaca_mulatta
ENSSFOG00015014718pabpn17967.914ENSMNEG00000035750-9973.944Macaca_nemestrina
ENSSFOG00015014718pabpn19975.536ENSMNEG00000045065BCL2L2-PABPN18475.966Macaca_nemestrina
ENSSFOG00015014718pabpn17265.868ENSMLEG00000034623-9971.831Mandrillus_leucophaeus
ENSSFOG00015014718pabpn19972.103ENSMLEG00000043862BCL2L2-PABPN19481.548Mandrillus_leucophaeus
ENSSFOG00015014718pabpn19995.633ENSMAMG00000007979pabpn17995.633Mastacembelus_armatus
ENSSFOG00015014718pabpn19596.364ENSMZEG00005011904pabpn17796.364Maylandia_zebra
ENSSFOG00015014718pabpn19972.961ENSMAUG00000007383Gm205217081.818Mesocricetus_auratus
ENSSFOG00015014718pabpn19976.068ENSMICG00000010002BCL2L2-PABPN18475.966Microcebus_murinus
ENSSFOG00015014718pabpn19972.532ENSMOCG00000018557Gm205219091.837Microtus_ochrogaster
ENSSFOG00015014718pabpn110096.552ENSMMOG00000005405pabpn110096.552Mola_mola
ENSSFOG00015014718pabpn18578.713ENSMODG00000004535-7969.835Monodelphis_domestica
ENSSFOG00015014718pabpn19996.943ENSMALG00000019612pabpn17896.943Monopterus_albus
ENSSFOG00015014718pabpn19972.532MGP_CAROLIEiJ_G0019276Gm205217072.532Mus_caroli
ENSSFOG00015014718pabpn18682.039MGP_CAROLIEiJ_G0019277Pabpn18992.466Mus_caroli
ENSSFOG00015014718pabpn19972.961ENSMUSG00000092232Gm205217072.961Mus_musculus
ENSSFOG00015014718pabpn18682.524ENSMUSG00000022194Pabpn18992.466Mus_musculus
ENSSFOG00015014718pabpn19972.961MGP_PahariEiJ_G0030294Gm205217072.961Mus_pahari
ENSSFOG00015014718pabpn18682.524MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSSFOG00015014718pabpn18682.524MGP_SPRETEiJ_G0020166Pabpn18992.466Mus_spretus
ENSSFOG00015014718pabpn19972.961MGP_SPRETEiJ_G0020165Gm205217072.961Mus_spretus
ENSSFOG00015014718pabpn16681.410ENSMPUG00000006775-8783.562Mustela_putorius_furo
ENSSFOG00015014718pabpn18879.048ENSMLUG00000012452-8270.635Myotis_lucifugus
ENSSFOG00015014718pabpn18182.632ENSMLUG00000003800-10082.632Myotis_lucifugus
ENSSFOG00015014718pabpn18480.808ENSMLUG00000028677-8572.881Myotis_lucifugus
ENSSFOG00015014718pabpn19972.532ENSNGAG00000019529Gm205217072.532Nannospalax_galili
ENSSFOG00015014718pabpn19596.364ENSNBRG00000023955pabpn19495.152Neolamprologus_brichardi
ENSSFOG00015014718pabpn19972.103ENSNLEG00000015007-7481.340Nomascus_leucogenys
ENSSFOG00015014718pabpn18669.756ENSNLEG00000030598-7769.231Nomascus_leucogenys
ENSSFOG00015014718pabpn16459.459ENSNLEG00000035292-9959.459Nomascus_leucogenys
ENSSFOG00015014718pabpn17671.508ENSODEG00000011555-8970.238Octodon_degus
ENSSFOG00015014718pabpn18673.892ENSODEG00000003739-7069.856Octodon_degus
ENSSFOG00015014718pabpn19971.674ENSODEG00000002083BCL2L2-PABPN16880.861Octodon_degus
ENSSFOG00015014718pabpn19596.364ENSONIG00000008112pabpn17796.364Oreochromis_niloticus
ENSSFOG00015014718pabpn16382.993ENSOANG00000009218-10082.993Ornithorhynchus_anatinus
ENSSFOG00015014718pabpn18681.553ENSOCUG00000016174PABPN19569.847Oryctolagus_cuniculus
ENSSFOG00015014718pabpn19995.197ENSORLG00000027900pabpn19095.755Oryzias_latipes
ENSSFOG00015014718pabpn19995.197ENSORLG00020004681pabpn17895.197Oryzias_latipes_hni
ENSSFOG00015014718pabpn110095.690ENSORLG00015000018pabpn110095.690Oryzias_latipes_hsok
ENSSFOG00015014718pabpn19596.364ENSOMEG00000016618pabpn18296.347Oryzias_melastigma
ENSSFOG00015014718pabpn18682.039ENSOGAG00000008710PABPN18670.076Otolemur_garnettii
ENSSFOG00015014718pabpn19972.103ENSOARG00000019336BCL2L2-PABPN16472.103Ovis_aries
ENSSFOG00015014718pabpn17166.867ENSPPAG00000039421-9366.867Pan_paniscus
ENSSFOG00015014718pabpn19972.103ENSPPAG00000028984BCL2L2-PABPN18783.562Pan_paniscus
ENSSFOG00015014718pabpn18682.039ENSPPRG00000010567PABPN18670.076Panthera_pardus
ENSSFOG00015014718pabpn17181.548ENSPTIG00000001063BCL2L2-PABPN19481.548Panthera_tigris_altaica
ENSSFOG00015014718pabpn19975.536ENSPTRG00000006167BCL2L28475.966Pan_troglodytes
ENSSFOG00015014718pabpn110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSSFOG00015014718pabpn19975.536ENSPANG00000021100BCL2L2-PABPN18475.966Papio_anubis
ENSSFOG00015014718pabpn18468.687ENSPANG00000023326-9974.648Papio_anubis
ENSSFOG00015014718pabpn17171.341ENSPKIG00000008340pabpn1l8469.767Paramormyrops_kingsleyae
ENSSFOG00015014718pabpn19995.197ENSPKIG00000008144-7895.197Paramormyrops_kingsleyae
ENSSFOG00015014718pabpn110092.704ENSPKIG00000018052pabpn110096.137Paramormyrops_kingsleyae
ENSSFOG00015014718pabpn15876.119ENSPSIG00000011959-8483.478Pelodiscus_sinensis
ENSSFOG00015014718pabpn19596.818ENSPMGG00000022027pabpn18196.818Periophthalmus_magnuspinnatus
ENSSFOG00015014718pabpn19972.961ENSPEMG00000008332Gm205218991.837Peromyscus_maniculatus_bairdii
ENSSFOG00015014718pabpn17976.882ENSPMAG00000006212pabpn19967.623Petromyzon_marinus
ENSSFOG00015014718pabpn18679.512ENSPCIG00000027751-8669.697Phascolarctos_cinereus
ENSSFOG00015014718pabpn110095.299ENSPFOG00000010351pabpn19995.299Poecilia_formosa
ENSSFOG00015014718pabpn19993.074ENSPLAG00000022696pabpn17994.805Poecilia_latipinna
ENSSFOG00015014718pabpn110095.299ENSPMEG00000020856pabpn110095.299Poecilia_mexicana
ENSSFOG00015014718pabpn110095.726ENSPREG00000011278pabpn110095.726Poecilia_reticulata
ENSSFOG00015014718pabpn18181.959ENSPPYG00000005663PABPN18670.248Pongo_abelii
ENSSFOG00015014718pabpn17969.271ENSPCAG00000005902PABPN18259.426Procavia_capensis
ENSSFOG00015014718pabpn19976.068ENSPCOG00000028047BCL2L2-PABPN18475.966Propithecus_coquereli
ENSSFOG00015014718pabpn18879.904ENSPVAG00000005270PABPN18668.821Pteropus_vampyrus
ENSSFOG00015014718pabpn110096.121ENSPNYG00000013182pabpn110096.121Pundamilia_nyererei
ENSSFOG00015014718pabpn110097.845ENSPNAG00000023526pabpn110097.845Pygocentrus_nattereri
ENSSFOG00015014718pabpn18861.353ENSPNAG00000021666pabpn1l8470.760Pygocentrus_nattereri
ENSSFOG00015014718pabpn18682.524ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSSFOG00015014718pabpn19368.519ENSRBIG00000039547-8265.625Rhinopithecus_bieti
ENSSFOG00015014718pabpn19471.493ENSRBIG00000040762BCL2L2-PABPN16572.512Rhinopithecus_bieti
ENSSFOG00015014718pabpn18870.813ENSRBIG00000042811-9566.079Rhinopithecus_bieti
ENSSFOG00015014718pabpn19466.071ENSRROG00000040409-8266.071Rhinopithecus_roxellana
ENSSFOG00015014718pabpn19471.493ENSRROG00000045535BCL2L2-PABPN19481.548Rhinopithecus_roxellana
ENSSFOG00015014718pabpn18867.299ENSRROG00000036409-7064.192Rhinopithecus_roxellana
ENSSFOG00015014718pabpn19968.293ENSSBOG00000026930BCL2L2-PABPN18783.562Saimiri_boliviensis_boliviensis
ENSSFOG00015014718pabpn19960.504ENSSHAG00000007707-9960.504Sarcophilus_harrisii
ENSSFOG00015014718pabpn18180.952ENSSHAG00000014841-8783.158Sarcophilus_harrisii
ENSSFOG00015014718pabpn110096.552ENSSMAG00000020157pabpn110096.552Scophthalmus_maximus
ENSSFOG00015014718pabpn19996.507ENSSDUG00000020582pabpn17896.507Seriola_dumerili
ENSSFOG00015014718pabpn110096.983ENSSLDG00000007118pabpn110096.983Seriola_lalandi_dorsalis
ENSSFOG00015014718pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSSFOG00015014718pabpn110095.279ENSSPAG00000021658pabpn110095.279Stegastes_partitus
ENSSFOG00015014718pabpn19972.103ENSSSCG00000002023PABPN18670.076Sus_scrofa
ENSSFOG00015014718pabpn19263.426ENSSSCG00000034805-7959.048Sus_scrofa
ENSSFOG00015014718pabpn110095.690ENSTRUG00000023664pabpn110095.690Takifugu_rubripes
ENSSFOG00015014718pabpn19290.698ENSTNIG00000005369pabpn19094.845Tetraodon_nigroviridis
ENSSFOG00015014718pabpn18682.039ENSUAMG00000024460PABPN16881.340Ursus_americanus
ENSSFOG00015014718pabpn19972.103ENSUMAG00000014288BCL2L2-PABPN17072.103Ursus_maritimus
ENSSFOG00015014718pabpn19972.103ENSVVUG00000019912BCL2L2-PABPN17682.474Vulpes_vulpes
ENSSFOG00015014718pabpn18484.694ENSXETG00000014597pabpn17381.019Xenopus_tropicalis
ENSSFOG00015014718pabpn17386.628ENSXCOG00000005158pabpn19886.628Xiphophorus_couchianus
ENSSFOG00015014718pabpn110096.154ENSXMAG00000006196pabpn110096.154Xiphophorus_maculatus

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