EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015014955 (Gene tree)
Gene ID: 108936864
Gene Symbol: rbm22
Alias: fb37a01|fc62e03|fe05c04|wu:fb37a01|wu:fc62e03|wu:fe05c04|zgc:77910
Full Name: RNA binding motif protein 22
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 11145 bases
Position: chrKV411125.1:290033-301177
Accession: 108936864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015023280	RRM_1	PF00076.22	7.1e-09	1	1
ENSSFOP00015023260	RRM_1	PF00076.22	8.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015023516	-	6035	XM_018756502	ENSSFOP00015023260	426 (aa)	XP_018612018	A0A1W5AF02
ENSSFOT00015023534	-	1188	-	ENSSFOP00015023280	395 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015014955's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015014955	rbm22	100	89.019	ENSSFOG00015022259	rbm22	100	89.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015014955	rbm22	99	87.943	ENSG00000086589	RBM22	100	91.935	Homo_sapiens
ENSSFOG00015014955	rbm22	99	88.290	ENSAPOG00000010338	rbm22	99	88.525	Acanthochromis_polyacanthus
ENSSFOG00015014955	rbm22	99	87.943	ENSAMEG00000004544	RBM22	99	86.288	Ailuropoda_melanoleuca
ENSSFOG00015014955	rbm22	99	81.567	ENSACIG00000016372	rbm22	99	81.797	Amphilophus_citrinellus
ENSSFOG00015014955	rbm22	99	88.290	ENSAOCG00000007179	rbm22	99	88.525	Amphiprion_ocellaris
ENSSFOG00015014955	rbm22	99	88.290	ENSAPEG00000016689	rbm22	99	88.525	Amphiprion_percula
ENSSFOG00015014955	rbm22	99	88.759	ENSATEG00000008286	rbm22	99	88.993	Anabas_testudineus
ENSSFOG00015014955	rbm22	98	84.450	ENSAPLG00000016408	RBM22	98	83.014	Anas_platyrhynchos
ENSSFOG00015014955	rbm22	99	84.906	ENSACAG00000014750	RBM22	99	85.377	Anolis_carolinensis
ENSSFOG00015014955	rbm22	99	87.707	ENSANAG00000033743	-	99	86.052	Aotus_nancymaae
ENSSFOG00015014955	rbm22	94	78.093	ENSANAG00000019688	-	99	80.000	Aotus_nancymaae
ENSSFOG00015014955	rbm22	99	88.056	ENSACLG00000008863	rbm22	99	88.290	Astatotilapia_calliptera
ENSSFOG00015014955	rbm22	100	88.028	ENSAMXG00000038080	rbm22	100	81.863	Astyanax_mexicanus
ENSSFOG00015014955	rbm22	99	85.647	ENSAMXG00000018529	-	99	86.118	Astyanax_mexicanus
ENSSFOG00015014955	rbm22	99	87.943	ENSBTAG00000030366	RBM22	99	86.288	Bos_taurus
ENSSFOG00015014955	rbm22	96	48.507	WBGene00011722	rbm-22	96	48.267	Caenorhabditis_elegans
ENSSFOG00015014955	rbm22	86	88.493	ENSCJAG00000013247	-	85	88.493	Callithrix_jacchus
ENSSFOG00015014955	rbm22	99	87.707	ENSCJAG00000020963	RBM22	99	86.052	Callithrix_jacchus
ENSSFOG00015014955	rbm22	99	87.529	ENSCAFG00000018082	RBM22	99	86.824	Canis_familiaris
ENSSFOG00015014955	rbm22	99	87.943	ENSCAFG00020023671	RBM22	99	86.288	Canis_lupus_dingo
ENSSFOG00015014955	rbm22	99	87.943	ENSCHIG00000015561	RBM22	99	86.288	Capra_hircus
ENSSFOG00015014955	rbm22	99	87.943	ENSTSYG00000003939	-	99	86.288	Carlito_syrichta
ENSSFOG00015014955	rbm22	92	73.138	ENSTSYG00000037586	-	99	75.749	Carlito_syrichta
ENSSFOG00015014955	rbm22	95	83.333	ENSCAPG00000002598	RBM22	95	84.184	Cavia_aperea
ENSSFOG00015014955	rbm22	99	87.943	ENSCPOG00000001946	RBM22	99	86.288	Cavia_porcellus
ENSSFOG00015014955	rbm22	99	87.707	ENSCCAG00000033546	RBM22	99	86.052	Cebus_capucinus
ENSSFOG00015014955	rbm22	99	87.943	ENSCATG00000042133	RBM22	99	86.288	Cercocebus_atys
ENSSFOG00015014955	rbm22	99	71.127	ENSCLAG00000007106	-	99	70.657	Chinchilla_lanigera
ENSSFOG00015014955	rbm22	99	64.941	ENSCLAG00000014221	-	93	64.775	Chinchilla_lanigera
ENSSFOG00015014955	rbm22	99	87.943	ENSCLAG00000010842	-	99	86.288	Chinchilla_lanigera
ENSSFOG00015014955	rbm22	93	89.114	ENSCSAG00000019006	-	98	89.406	Chlorocebus_sabaeus
ENSSFOG00015014955	rbm22	99	86.998	ENSCHOG00000013522	-	99	85.343	Choloepus_hoffmanni
ENSSFOG00015014955	rbm22	75	92.593	ENSCHOG00000004192	-	98	92.466	Choloepus_hoffmanni
ENSSFOG00015014955	rbm22	99	87.470	ENSCHOG00000001041	-	99	85.816	Choloepus_hoffmanni
ENSSFOG00015014955	rbm22	99	87.470	ENSCPBG00000010094	RBM22	99	85.816	Chrysemys_picta_bellii
ENSSFOG00015014955	rbm22	98	62.884	ENSCING00000005843	zf(c3h)-12	99	63.507	Ciona_intestinalis
ENSSFOG00015014955	rbm22	98	63.593	ENSCSAVG00000009145	-	99	61.611	Ciona_savignyi
ENSSFOG00015014955	rbm22	99	87.943	ENSCANG00000025232	RBM22	99	86.288	Colobus_angolensis_palliatus
ENSSFOG00015014955	rbm22	99	87.943	ENSCGRG00001015110	Rbm22	99	86.288	Cricetulus_griseus_chok1gshd
ENSSFOG00015014955	rbm22	99	82.857	ENSCGRG00000011751	Rbm22	99	81.905	Cricetulus_griseus_crigri
ENSSFOG00015014955	rbm22	99	86.936	ENSCSEG00000010790	rbm22	98	87.173	Cynoglossus_semilaevis
ENSSFOG00015014955	rbm22	99	86.321	ENSCVAG00000010670	rbm22	99	86.557	Cyprinodon_variegatus
ENSSFOG00015014955	rbm22	99	87.765	ENSDARG00000010238	rbm22	99	87.765	Danio_rerio
ENSSFOG00015014955	rbm22	99	87.943	ENSDNOG00000011166	RBM22	99	86.288	Dasypus_novemcinctus
ENSSFOG00015014955	rbm22	99	67.376	ENSDORG00000005329	Rbm22	99	66.667	Dipodomys_ordii
ENSSFOG00015014955	rbm22	83	64.773	FBgn0037220	CG14641	99	53.919	Drosophila_melanogaster
ENSSFOG00015014955	rbm22	92	89.362	ENSEBUG00000016742	-	99	89.362	Eptatretus_burgeri
ENSSFOG00015014955	rbm22	99	87.943	ENSEASG00005002681	RBM22	99	86.288	Equus_asinus_asinus
ENSSFOG00015014955	rbm22	97	85.950	ENSECAG00000014940	RBM22	99	79.015	Equus_caballus
ENSSFOG00015014955	rbm22	99	70.922	ENSEEUG00000009778	-	99	70.213	Erinaceus_europaeus
ENSSFOG00015014955	rbm22	99	86.525	ENSEEUG00000005638	-	99	84.634	Erinaceus_europaeus
ENSSFOG00015014955	rbm22	99	90.094	ENSELUG00000001106	rbm22	96	90.094	Esox_lucius
ENSSFOG00015014955	rbm22	99	87.943	ENSFCAG00000018845	RBM22	99	86.288	Felis_catus
ENSSFOG00015014955	rbm22	99	87.470	ENSFALG00000008051	RBM22	99	85.816	Ficedula_albicollis
ENSSFOG00015014955	rbm22	99	87.943	ENSFDAG00000020067	RBM22	99	86.288	Fukomys_damarensis
ENSSFOG00015014955	rbm22	99	86.824	ENSFHEG00000014032	rbm22	99	87.059	Fundulus_heteroclitus
ENSSFOG00015014955	rbm22	99	86.967	ENSGMOG00000010186	rbm22	100	87.204	Gadus_morhua
ENSSFOG00015014955	rbm22	99	87.470	ENSGALG00000004555	RBM22	99	85.816	Gallus_gallus
ENSSFOG00015014955	rbm22	99	86.854	ENSGAFG00000008621	rbm22	99	87.264	Gambusia_affinis
ENSSFOG00015014955	rbm22	99	85.915	ENSGACG00000018027	rbm22	99	86.385	Gasterosteus_aculeatus
ENSSFOG00015014955	rbm22	99	87.707	ENSGAGG00000024305	RBM22	99	86.052	Gopherus_agassizii
ENSSFOG00015014955	rbm22	99	87.943	ENSGGOG00000012947	RBM22	99	86.288	Gorilla_gorilla
ENSSFOG00015014955	rbm22	99	88.056	ENSHBUG00000002941	rbm22	99	88.290	Haplochromis_burtoni
ENSSFOG00015014955	rbm22	99	87.943	ENSHGLG00000008488	RBM22	99	86.288	Heterocephalus_glaber_female
ENSSFOG00015014955	rbm22	97	87.952	ENSHGLG00100006872	RBM22	98	86.265	Heterocephalus_glaber_male
ENSSFOG00015014955	rbm22	85	87.603	ENSHCOG00000016334	rbm22	92	87.397	Hippocampus_comes
ENSSFOG00015014955	rbm22	100	87.559	ENSIPUG00000019751	rbm22	100	87.559	Ictalurus_punctatus
ENSSFOG00015014955	rbm22	99	73.522	ENSSTOG00000027197	RBM22	99	69.504	Ictidomys_tridecemlineatus
ENSSFOG00015014955	rbm22	99	73.050	ENSSTOG00000029346	-	97	74.442	Ictidomys_tridecemlineatus
ENSSFOG00015014955	rbm22	99	87.943	ENSJJAG00000009565	Rbm22	99	86.288	Jaculus_jaculus
ENSSFOG00015014955	rbm22	99	87.354	ENSKMAG00000004354	rbm22	99	87.588	Kryptolebias_marmoratus
ENSSFOG00015014955	rbm22	99	88.333	ENSLBEG00000027750	rbm22	88	88.571	Labrus_bergylta
ENSSFOG00015014955	rbm22	100	93.662	ENSLOCG00000010989	rbm22	100	93.662	Lepisosteus_oculatus
ENSSFOG00015014955	rbm22	99	87.943	ENSLAFG00000006638	RBM22	99	86.288	Loxodonta_africana
ENSSFOG00015014955	rbm22	99	87.943	ENSMFAG00000004034	RBM22	99	86.288	Macaca_fascicularis
ENSSFOG00015014955	rbm22	99	87.943	ENSMMUG00000020683	RBM22	99	86.288	Macaca_mulatta
ENSSFOG00015014955	rbm22	99	87.943	ENSMNEG00000035500	RBM22	99	86.288	Macaca_nemestrina
ENSSFOG00015014955	rbm22	99	87.943	ENSMLEG00000034825	RBM22	99	86.288	Mandrillus_leucophaeus
ENSSFOG00015014955	rbm22	99	88.290	ENSMAMG00000007370	rbm22	99	88.525	Mastacembelus_armatus
ENSSFOG00015014955	rbm22	99	88.056	ENSMZEG00005013001	rbm22	99	88.290	Maylandia_zebra
ENSSFOG00015014955	rbm22	99	87.470	ENSMGAG00000006298	RBM22	99	85.816	Meleagris_gallopavo
ENSSFOG00015014955	rbm22	99	87.943	ENSMAUG00000001133	Rbm22	99	86.288	Mesocricetus_auratus
ENSSFOG00015014955	rbm22	99	87.943	ENSMICG00000033712	RBM22	99	86.288	Microcebus_murinus
ENSSFOG00015014955	rbm22	99	81.797	ENSMOCG00000018311	Rbm22	99	81.087	Microtus_ochrogaster
ENSSFOG00015014955	rbm22	99	86.885	ENSMMOG00000003192	rbm22	99	87.119	Mola_mola
ENSSFOG00015014955	rbm22	100	79.206	ENSMODG00000006398	-	100	79.206	Monodelphis_domestica
ENSSFOG00015014955	rbm22	99	86.761	ENSMODG00000009574	-	99	85.106	Monodelphis_domestica
ENSSFOG00015014955	rbm22	99	88.056	ENSMALG00000013964	rbm22	99	88.290	Monopterus_albus
ENSSFOG00015014955	rbm22	99	87.943	MGP_CAROLIEiJ_G0022307	Rbm22	99	86.288	Mus_caroli
ENSSFOG00015014955	rbm22	99	87.943	ENSMUSG00000024604	Rbm22	99	86.288	Mus_musculus
ENSSFOG00015014955	rbm22	99	87.943	MGP_PahariEiJ_G0019037	Rbm22	99	86.288	Mus_pahari
ENSSFOG00015014955	rbm22	99	87.943	MGP_SPRETEiJ_G0023219	Rbm22	99	86.288	Mus_spretus
ENSSFOG00015014955	rbm22	99	87.943	ENSMPUG00000013760	RBM22	99	86.288	Mustela_putorius_furo
ENSSFOG00015014955	rbm22	99	84.870	ENSMLUG00000003461	-	99	84.161	Myotis_lucifugus
ENSSFOG00015014955	rbm22	99	87.943	ENSMLUG00000009040	RBM22	99	86.288	Myotis_lucifugus
ENSSFOG00015014955	rbm22	99	87.943	ENSNGAG00000018233	Rbm22	99	86.288	Nannospalax_galili
ENSSFOG00015014955	rbm22	88	90.202	ENSNBRG00000010458	rbm22	95	90.202	Neolamprologus_brichardi
ENSSFOG00015014955	rbm22	99	87.943	ENSNLEG00000010397	-	99	86.288	Nomascus_leucogenys
ENSSFOG00015014955	rbm22	99	77.014	ENSMEUG00000009348	-	99	75.829	Notamacropus_eugenii
ENSSFOG00015014955	rbm22	82	73.927	ENSMEUG00000001573	-	72	73.927	Notamacropus_eugenii
ENSSFOG00015014955	rbm22	99	88.180	ENSOPRG00000008481	-	99	86.525	Ochotona_princeps
ENSSFOG00015014955	rbm22	99	68.922	ENSOPRG00000016612	-	99	68.922	Ochotona_princeps
ENSSFOG00015014955	rbm22	99	87.234	ENSODEG00000005016	RBM22	99	85.579	Octodon_degus
ENSSFOG00015014955	rbm22	99	88.263	ENSONIG00000013049	rbm22	99	87.793	Oreochromis_niloticus
ENSSFOG00015014955	rbm22	99	83.803	ENSOANG00000002314	RBM22	99	85.681	Ornithorhynchus_anatinus
ENSSFOG00015014955	rbm22	99	87.943	ENSOCUG00000011532	RBM22	99	86.288	Oryctolagus_cuniculus
ENSSFOG00015014955	rbm22	99	85.211	ENSORLG00000004975	rbm22	99	85.211	Oryzias_latipes
ENSSFOG00015014955	rbm22	99	85.211	ENSORLG00020012969	rbm22	99	85.211	Oryzias_latipes_hni
ENSSFOG00015014955	rbm22	99	85.211	ENSORLG00015022508	rbm22	99	85.211	Oryzias_latipes_hsok
ENSSFOG00015014955	rbm22	99	84.507	ENSOMEG00000004904	rbm22	99	84.977	Oryzias_melastigma
ENSSFOG00015014955	rbm22	99	82.629	ENSOGAG00000011086	RBM22	99	82.118	Otolemur_garnettii
ENSSFOG00015014955	rbm22	99	86.118	ENSOARG00000007633	RBM22	99	84.471	Ovis_aries
ENSSFOG00015014955	rbm22	99	87.943	ENSPPAG00000034432	RBM22	99	86.288	Pan_paniscus
ENSSFOG00015014955	rbm22	99	87.943	ENSPPRG00000011577	RBM22	99	86.288	Panthera_pardus
ENSSFOG00015014955	rbm22	99	87.943	ENSPTIG00000004453	RBM22	99	86.288	Panthera_tigris_altaica
ENSSFOG00015014955	rbm22	99	87.943	ENSPTRG00000017423	RBM22	99	86.288	Pan_troglodytes
ENSSFOG00015014955	rbm22	99	87.943	ENSPANG00000011297	RBM22	99	86.288	Papio_anubis
ENSSFOG00015014955	rbm22	85	87.637	ENSPKIG00000019326	rbm22	83	89.315	Paramormyrops_kingsleyae
ENSSFOG00015014955	rbm22	100	92.488	ENSPKIG00000010315	rbm22	100	92.488	Paramormyrops_kingsleyae
ENSSFOG00015014955	rbm22	99	87.707	ENSPSIG00000012818	RBM22	99	86.052	Pelodiscus_sinensis
ENSSFOG00015014955	rbm22	99	84.524	ENSPMGG00000017638	rbm22	100	85.714	Periophthalmus_magnuspinnatus
ENSSFOG00015014955	rbm22	99	87.943	ENSPEMG00000001753	Rbm22	99	86.288	Peromyscus_maniculatus_bairdii
ENSSFOG00015014955	rbm22	82	66.181	ENSPMAG00000007317	-	100	68.481	Petromyzon_marinus
ENSSFOG00015014955	rbm22	99	74.468	ENSPCIG00000015088	RBM22	99	72.813	Phascolarctos_cinereus
ENSSFOG00015014955	rbm22	99	86.620	ENSPFOG00000005625	rbm22	99	87.028	Poecilia_formosa
ENSSFOG00015014955	rbm22	99	86.385	ENSPLAG00000006344	rbm22	99	86.792	Poecilia_latipinna
ENSSFOG00015014955	rbm22	99	83.292	ENSPMEG00000007992	rbm22	99	86.118	Poecilia_mexicana
ENSSFOG00015014955	rbm22	99	86.620	ENSPREG00000003546	rbm22	99	87.028	Poecilia_reticulata
ENSSFOG00015014955	rbm22	99	87.943	ENSPPYG00000015955	RBM22	99	86.288	Pongo_abelii
ENSSFOG00015014955	rbm22	86	75.890	ENSPCAG00000015091	RBM22	97	75.890	Procavia_capensis
ENSSFOG00015014955	rbm22	99	87.943	ENSPVAG00000014231	RBM22	99	86.288	Pteropus_vampyrus
ENSSFOG00015014955	rbm22	88	90.490	ENSPNYG00000000380	rbm22	95	90.490	Pundamilia_nyererei
ENSSFOG00015014955	rbm22	100	88.498	ENSPNAG00000002687	rbm22	100	88.498	Pygocentrus_nattereri
ENSSFOG00015014955	rbm22	99	88.235	ENSPNAG00000010001	-	99	89.176	Pygocentrus_nattereri
ENSSFOG00015014955	rbm22	99	87.943	ENSRNOG00000019235	Rbm22	99	86.288	Rattus_norvegicus
ENSSFOG00015014955	rbm22	99	87.943	ENSRBIG00000041683	RBM22	99	86.288	Rhinopithecus_bieti
ENSSFOG00015014955	rbm22	99	87.943	ENSRROG00000041637	RBM22	99	86.288	Rhinopithecus_roxellana
ENSSFOG00015014955	rbm22	99	87.470	ENSSBOG00000035400	-	99	85.816	Saimiri_boliviensis_boliviensis
ENSSFOG00015014955	rbm22	99	86.525	ENSSHAG00000017734	-	99	84.870	Sarcophilus_harrisii
ENSSFOG00015014955	rbm22	99	88.759	ENSSMAG00000002921	rbm22	99	88.993	Scophthalmus_maximus
ENSSFOG00015014955	rbm22	99	88.993	ENSSDUG00000003846	rbm22	99	89.227	Seriola_dumerili
ENSSFOG00015014955	rbm22	99	88.993	ENSSLDG00000003804	rbm22	99	89.227	Seriola_lalandi_dorsalis
ENSSFOG00015014955	rbm22	99	84.906	ENSSPUG00000003986	RBM22	99	85.377	Sphenodon_punctatus
ENSSFOG00015014955	rbm22	99	88.525	ENSSPAG00000000383	rbm22	99	88.759	Stegastes_partitus
ENSSFOG00015014955	rbm22	99	87.736	ENSSSCG00000023231	RBM22	99	86.085	Sus_scrofa
ENSSFOG00015014955	rbm22	99	87.470	ENSTGUG00000000850	RBM22	99	85.816	Taeniopygia_guttata
ENSSFOG00015014955	rbm22	99	86.183	ENSTRUG00000004724	rbm22	99	86.417	Takifugu_rubripes
ENSSFOG00015014955	rbm22	99	75.414	ENSTBEG00000005617	RBM22	99	73.759	Tupaia_belangeri
ENSSFOG00015014955	rbm22	99	87.943	ENSTTRG00000012778	RBM22	99	86.288	Tursiops_truncatus
ENSSFOG00015014955	rbm22	99	87.943	ENSUAMG00000025133	RBM22	99	86.288	Ursus_americanus
ENSSFOG00015014955	rbm22	99	87.943	ENSUMAG00000003651	RBM22	99	86.288	Ursus_maritimus
ENSSFOG00015014955	rbm22	99	87.943	ENSVVUG00000007193	RBM22	99	86.288	Vulpes_vulpes
ENSSFOG00015014955	rbm22	99	82.227	ENSXETG00000020435	rbm22	99	84.123	Xenopus_tropicalis
ENSSFOG00015014955	rbm22	99	82.588	ENSXCOG00000003316	rbm22	99	82.824	Xiphophorus_couchianus
ENSSFOG00015014955	rbm22	99	86.824	ENSXMAG00000008681	rbm22	99	87.059	Xiphophorus_maculatus