EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015014964 (Gene tree)
Gene ID
108933524
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
27891 bases
Position
chrKV410795.1:1790700-1818590
Accession
108933524
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015023272RRM_1PF00076.221.2e-3212
ENSSFOP00015023272RRM_1PF00076.221.2e-3222
ENSSFOP00015023305RRM_1PF00076.228.7e-2812
ENSSFOP00015023305RRM_1PF00076.228.7e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015023527-3809XM_018750660ENSSFOP00015023272346 (aa)XP_018606176A0A1W5A0A2
ENSSFOT00015023559-984-ENSSFOP00015023305327 (aa)--
Gene Model
Click here to download ENSSFOG00015014964's gene model file
Pathways
Pathway IDPathway NameSource
sfm03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015014964's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015014964-9595.783ENSSFOG00015005350MSI110092.593
ENSSFOG00015014964-5048.333ENSSFOG00015005893hnrnpdl7948.333
ENSSFOG00015014964-9067.299ENSSFOG00015012168msi2b9251.482
ENSSFOG00015014964-9572.340ENSSFOG00015021687-9772.542
ENSSFOG00015014964-5241.304ENSSFOG00015007588-6538.767
ENSSFOG00015014964-5343.243ENSSFOG00015016280hnrnpa17139.565
ENSSFOG00015014964-5048.980ENSSFOG00015001814hnrnpa36038.914
ENSSFOG00015014964-5041.143ENSSFOG00015002650HNRNPA05741.530
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015014964-9586.842ENSG00000135097MSI19886.842Homo_sapiens
ENSSFOG00015014964-9594.225ENSAPOG00000023458-9494.225Acanthochromis_polyacanthus
ENSSFOG00015014964-9596.037ENSAPOG00000003191MSI19496.037Acanthochromis_polyacanthus
ENSSFOG00015014964-9086.752ENSAMEG00000013302MSI110086.752Ailuropoda_melanoleuca
ENSSFOG00015014964-9189.769ENSACIG00000017754-7294.581Amphilophus_citrinellus
ENSSFOG00015014964-9783.333ENSAOCG00000009031-9584.146Amphiprion_ocellaris
ENSSFOG00015014964-9596.037ENSAOCG00000003804MSI19496.037Amphiprion_ocellaris
ENSSFOG00015014964-9596.037ENSAPEG00000003245MSI19496.037Amphiprion_percula
ENSSFOG00015014964-9594.225ENSAPEG00000006857-7994.225Amphiprion_percula
ENSSFOG00015014964-9587.576ENSATEG00000023779-9387.576Anabas_testudineus
ENSSFOG00015014964-9594.006ENSATEG00000017059MSI19594.006Anabas_testudineus
ENSSFOG00015014964-9587.353ENSACAG00000002762MSI19488.235Anolis_carolinensis
ENSSFOG00015014964-9586.842ENSANAG00000027151MSI19886.842Aotus_nancymaae
ENSSFOG00015014964-7786.466ENSANAG00000027901-8886.466Aotus_nancymaae
ENSSFOG00015014964-9595.441ENSACLG00000011230MSI19495.441Astatotilapia_calliptera
ENSSFOG00015014964-9594.817ENSACLG00000000117-10094.801Astatotilapia_calliptera
ENSSFOG00015014964-9591.223ENSAMXG00000038960msi17691.223Astyanax_mexicanus
ENSSFOG00015014964-9586.842ENSBTAG00000009800MSI110086.804Bos_taurus
ENSSFOG00015014964-9586.842ENSCJAG00000008578MSI19886.842Callithrix_jacchus
ENSSFOG00015014964-9586.550ENSCAFG00000010283MSI19886.550Canis_familiaris
ENSSFOG00015014964-9586.817ENSCAFG00020020585MSI110086.817Canis_lupus_dingo
ENSSFOG00015014964-9585.014ENSCHIG00000024304MSI19885.014Capra_hircus
ENSSFOG00015014964-9586.239ENSTSYG00000033949MSI19586.239Carlito_syrichta
ENSSFOG00015014964-9586.447ENSCAPG00000003919MSI17886.447Cavia_aperea
ENSSFOG00015014964-9586.842ENSCPOG00000012361MSI110086.842Cavia_porcellus
ENSSFOG00015014964-9586.842ENSCCAG00000035567MSI19886.842Cebus_capucinus
ENSSFOG00015014964-9586.842ENSCATG00000030019MSI19886.842Cercocebus_atys
ENSSFOG00015014964-9586.842ENSCLAG00000011329MSI110086.842Chinchilla_lanigera
ENSSFOG00015014964-7385.992ENSCSAG00000002265MSI18985.992Chlorocebus_sabaeus
ENSSFOG00015014964-9590.030ENSCPBG00000011349MSI19490.030Chrysemys_picta_bellii
ENSSFOG00015014964-9586.280ENSCANG00000040651MSI110086.280Colobus_angolensis_palliatus
ENSSFOG00015014964-9586.842ENSCGRG00001018883Msi19886.842Cricetulus_griseus_chok1gshd
ENSSFOG00015014964-9586.322ENSCGRG00000002191Msi17286.322Cricetulus_griseus_crigri
ENSSFOG00015014964-9594.817ENSCSEG00000005834-9693.925Cynoglossus_semilaevis
ENSSFOG00015014964-9585.015ENSCSEG00000011032MSI110086.149Cynoglossus_semilaevis
ENSSFOG00015014964-9593.598ENSCSEG00000008352-9493.598Cynoglossus_semilaevis
ENSSFOG00015014964-6377.419ENSCVAG00000017463-8977.419Cyprinodon_variegatus
ENSSFOG00015014964-9594.817ENSCVAG00000009100MSI19494.817Cyprinodon_variegatus
ENSSFOG00015014964-9587.619ENSDARG00000010710msi110094.393Danio_rerio
ENSSFOG00015014964-8095.814ENSDARG00000102015CABZ01037298.19895.814Danio_rerio
ENSSFOG00015014964-9583.228ENSDNOG00000005713MSI19183.228Dasypus_novemcinctus
ENSSFOG00015014964-9285.629ENSDORG00000005610Msi19485.629Dipodomys_ordii
ENSSFOG00015014964-9583.232ENSETEG00000004756MSI110083.232Echinops_telfairi
ENSSFOG00015014964-9586.842ENSEASG00005004736MSI19886.842Equus_asinus_asinus
ENSSFOG00015014964-9785.429ENSECAG00000017526MSI19886.842Equus_caballus
ENSSFOG00015014964-9589.602ENSELUG00000023280-10089.297Esox_lucius
ENSSFOG00015014964-9787.989ENSELUG00000023219MSI19289.112Esox_lucius
ENSSFOG00015014964-9586.842ENSFCAG00000011007MSI19886.842Felis_catus
ENSSFOG00015014964-9590.667ENSFALG00000007574MSI110090.667Ficedula_albicollis
ENSSFOG00015014964-9585.976ENSFDAG00000019586MSI110085.976Fukomys_damarensis
ENSSFOG00015014964-9594.529ENSFHEG00000022446MSI19494.529Fundulus_heteroclitus
ENSSFOG00015014964-9595.427ENSFHEG00000003560-9495.427Fundulus_heteroclitus
ENSSFOG00015014964-9585.285ENSGMOG00000017838-9485.285Gadus_morhua
ENSSFOG00015014964-9593.598ENSGMOG00000001006MSI19493.293Gadus_morhua
ENSSFOG00015014964-9590.840ENSGALG00000007227MSI19677.628Gallus_gallus
ENSSFOG00015014964-9079.592ENSGAFG00000005860-8979.592Gambusia_affinis
ENSSFOG00015014964-9892.899ENSGAFG00000021522MSI19494.817Gambusia_affinis
ENSSFOG00015014964-9586.804ENSGACG00000008674-9486.804Gasterosteus_aculeatus
ENSSFOG00015014964-9593.009ENSGACG00000012679MSI19493.009Gasterosteus_aculeatus
ENSSFOG00015014964-9590.030ENSGAGG00000016037MSI19490.030Gopherus_agassizii
ENSSFOG00015014964-9586.624ENSGGOG00000010328MSI110086.624Gorilla_gorilla
ENSSFOG00015014964-9594.817ENSHBUG00000011841-9494.817Haplochromis_burtoni
ENSSFOG00015014964-9595.441ENSHBUG00000021921MSI19495.441Haplochromis_burtoni
ENSSFOG00015014964-9586.550ENSHGLG00000012782MSI19886.550Heterocephalus_glaber_female
ENSSFOG00015014964-9585.976ENSHGLG00100016848MSI110085.976Heterocephalus_glaber_male
ENSSFOG00015014964-9690.361ENSHCOG00000012067-8994.286Hippocampus_comes
ENSSFOG00015014964-9193.631ENSHCOG00000012019MSI110089.527Hippocampus_comes
ENSSFOG00015014964-9591.793ENSIPUG00000001976msi19591.793Ictalurus_punctatus
ENSSFOG00015014964-9586.817ENSSTOG00000009799MSI110086.817Ictidomys_tridecemlineatus
ENSSFOG00015014964-9573.607ENSJJAG00000010643-9475.000Jaculus_jaculus
ENSSFOG00015014964-9586.842ENSJJAG00000010463Msi19886.842Jaculus_jaculus
ENSSFOG00015014964-9594.512ENSKMAG00000011251MSI19494.512Kryptolebias_marmoratus
ENSSFOG00015014964-9589.602ENSKMAG00000019877-10090.878Kryptolebias_marmoratus
ENSSFOG00015014964-9596.037ENSLBEG00000001375-9496.037Labrus_bergylta
ENSSFOG00015014964-9594.833ENSLBEG00000008789MSI19494.833Labrus_bergylta
ENSSFOG00015014964-9586.047ENSLACG00000018287MSI110086.047Latimeria_chalumnae
ENSSFOG00015014964-9177.039ENSLAFG00000009412MSI110077.039Loxodonta_africana
ENSSFOG00015014964-9586.842ENSMFAG00000001798MSI110086.842Macaca_fascicularis
ENSSFOG00015014964-9586.842ENSMMUG00000031527MSI19786.842Macaca_mulatta
ENSSFOG00015014964-9586.842ENSMNEG00000040034MSI19886.842Macaca_nemestrina
ENSSFOG00015014964-9586.280ENSMLEG00000003921MSI110086.280Mandrillus_leucophaeus
ENSSFOG00015014964-9593.902ENSMAMG00000002279MSI19493.902Mastacembelus_armatus
ENSSFOG00015014964-9595.427ENSMAMG00000018426-9495.427Mastacembelus_armatus
ENSSFOG00015014964-9594.817ENSMZEG00005000340-9494.817Maylandia_zebra
ENSSFOG00015014964-9595.441ENSMZEG00005026892MSI19495.441Maylandia_zebra
ENSSFOG00015014964-6495.266ENSMGAG00000016518-10095.266Meleagris_gallopavo
ENSSFOG00015014964-7089.300ENSMAUG00000016820Msi110089.300Mesocricetus_auratus
ENSSFOG00015014964-9586.842ENSMICG00000033181MSI19886.842Microcebus_murinus
ENSSFOG00015014964-9586.550ENSMOCG00000002286Msi19886.550Microtus_ochrogaster
ENSSFOG00015014964-9981.105ENSMMOG00000010492MSI19683.446Mola_mola
ENSSFOG00015014964-9587.616ENSMMOG00000012265-9691.216Mola_mola
ENSSFOG00015014964-9159.940ENSMODG00000003189-10059.940Monodelphis_domestica
ENSSFOG00015014964-9594.817ENSMALG00000017889MSI19494.817Monopterus_albus
ENSSFOG00015014964-9595.107ENSMALG00000001426-10095.107Monopterus_albus
ENSSFOG00015014964-9586.257MGP_CAROLIEiJ_G0027626Msi19985.283Mus_caroli
ENSSFOG00015014964-9588.889ENSMUSG00000054256Msi19988.889Mus_musculus
ENSSFOG00015014964-9589.394MGP_PahariEiJ_G0024206Msi19889.394Mus_pahari
ENSSFOG00015014964-9586.257MGP_SPRETEiJ_G0028624Msi19985.283Mus_spretus
ENSSFOG00015014964-9586.817ENSMPUG00000003168MSI110086.817Mustela_putorius_furo
ENSSFOG00015014964-9577.679ENSMLUG00000010313MSI110077.679Myotis_lucifugus
ENSSFOG00015014964-9586.322ENSNGAG00000014508Msi19186.322Nannospalax_galili
ENSSFOG00015014964-9586.475ENSNBRG00000018012MSI19986.475Neolamprologus_brichardi
ENSSFOG00015014964-9594.817ENSNBRG00000000841-9494.817Neolamprologus_brichardi
ENSSFOG00015014964-9176.524ENSNLEG00000015636MSI110076.524Nomascus_leucogenys
ENSSFOG00015014964-9566.768ENSMEUG00000015759MSI110066.768Notamacropus_eugenii
ENSSFOG00015014964-9179.048ENSOPRG00000016879MSI110079.048Ochotona_princeps
ENSSFOG00015014964-9586.280ENSODEG00000006328MSI110086.280Octodon_degus
ENSSFOG00015014964-9591.813ENSONIG00000019452-9491.813Oreochromis_niloticus
ENSSFOG00015014964-9594.817ENSONIG00000011182MSI19494.817Oreochromis_niloticus
ENSSFOG00015014964-9586.817ENSOCUG00000027716MSI110086.817Oryctolagus_cuniculus
ENSSFOG00015014964-9594.225ENSORLG00000019978-9494.225Oryzias_latipes
ENSSFOG00015014964-9594.833ENSORLG00000029593MSI19494.817Oryzias_latipes
ENSSFOG00015014964-9594.833ENSORLG00020008266MSI19990.878Oryzias_latipes_hni
ENSSFOG00015014964-9594.225ENSORLG00020001208-6794.225Oryzias_latipes_hni
ENSSFOG00015014964-9594.225ENSORLG00015013672-7190.236Oryzias_latipes_hsok
ENSSFOG00015014964-9594.833ENSORLG00015003916MSI19990.878Oryzias_latipes_hsok
ENSSFOG00015014964-9892.625ENSOMEG00000002272-9695.122Oryzias_melastigma
ENSSFOG00015014964-9594.225ENSOMEG00000017536MSI110089.634Oryzias_melastigma
ENSSFOG00015014964-9586.087ENSOGAG00000003847MSI19886.087Otolemur_garnettii
ENSSFOG00015014964-9583.636ENSOARG00000012097MSI110083.636Ovis_aries
ENSSFOG00015014964-9586.280ENSPPAG00000043073MSI110086.280Pan_paniscus
ENSSFOG00015014964-9586.842ENSPPRG00000000370MSI19886.842Panthera_pardus
ENSSFOG00015014964-9586.817ENSPTIG00000008913MSI110086.817Panthera_tigris_altaica
ENSSFOG00015014964-9586.842ENSPTRG00000005531MSI19886.842Pan_troglodytes
ENSSFOG00015014964-9586.550ENSPANG00000006335MSI19886.550Papio_anubis
ENSSFOG00015014964-9599.085ENSPKIG00000016497MSI19499.085Paramormyrops_kingsleyae
ENSSFOG00015014964-9595.427ENSPKIG00000023575-9495.427Paramormyrops_kingsleyae
ENSSFOG00015014964-8082.895ENSPSIG00000009621-10082.895Pelodiscus_sinensis
ENSSFOG00015014964-9587.273ENSPSIG00000011608-9387.500Pelodiscus_sinensis
ENSSFOG00015014964-9188.571ENSPMGG00000000514MSI19789.753Periophthalmus_magnuspinnatus
ENSSFOG00015014964-9576.364ENSPMGG00000007743-9274.303Periophthalmus_magnuspinnatus
ENSSFOG00015014964-9584.866ENSPEMG00000010491Msi19584.866Peromyscus_maniculatus_bairdii
ENSSFOG00015014964-9595.427ENSPFOG00000008319-8195.427Poecilia_formosa
ENSSFOG00015014964-9594.225ENSPFOG00000013113MSI19494.225Poecilia_formosa
ENSSFOG00015014964-9595.427ENSPLAG00000012431-9195.427Poecilia_latipinna
ENSSFOG00015014964-9594.225ENSPLAG00000014025-9494.225Poecilia_latipinna
ENSSFOG00015014964-9594.817ENSPMEG00000007025-9385.061Poecilia_mexicana
ENSSFOG00015014964-9594.225ENSPMEG00000012796MSI19494.225Poecilia_mexicana
ENSSFOG00015014964-9589.841ENSPREG00000021416-9491.554Poecilia_reticulata
ENSSFOG00015014964-6180.543ENSPREG00000014574-10082.673Poecilia_reticulata
ENSSFOG00015014964-9585.965ENSPPYG00000005027MSI19885.965Pongo_abelii
ENSSFOG00015014964-7789.848ENSPCAG00000002300MSI17289.848Procavia_capensis
ENSSFOG00015014964-9586.842ENSPCOG00000017341MSI19886.842Propithecus_coquereli
ENSSFOG00015014964-9569.817ENSPVAG00000002225MSI110069.817Pteropus_vampyrus
ENSSFOG00015014964-9594.817ENSPNYG00000002529-9494.817Pundamilia_nyererei
ENSSFOG00015014964-9595.441ENSPNYG00000004379MSI19495.441Pundamilia_nyererei
ENSSFOG00015014964-9592.097ENSPNAG00000019337msi19492.097Pygocentrus_nattereri
ENSSFOG00015014964-9586.495ENSRNOG00000001156Msi110086.495Rattus_norvegicus
ENSSFOG00015014964-9586.817ENSRBIG00000036889MSI110086.817Rhinopithecus_bieti
ENSSFOG00015014964-9586.061ENSRROG00000041076MSI19386.061Rhinopithecus_roxellana
ENSSFOG00015014964-9586.880ENSSBOG00000030259MSI19986.842Saimiri_boliviensis_boliviensis
ENSSFOG00015014964-9576.797ENSSHAG00000006834MSI110076.797Sarcophilus_harrisii
ENSSFOG00015014964-9595.402ENSSMAG00000009156-7394.554Scophthalmus_maximus
ENSSFOG00015014964-9587.774ENSSMAG00000018824MSI19790.909Scophthalmus_maximus
ENSSFOG00015014964-9596.341ENSSDUG00000022697-9496.341Seriola_dumerili
ENSSFOG00015014964-9594.529ENSSDUG00000001027MSI19494.529Seriola_dumerili
ENSSFOG00015014964-9594.529ENSSLDG00000016832MSI19494.529Seriola_lalandi_dorsalis
ENSSFOG00015014964-9585.163ENSSLDG00000018706-9688.387Seriola_lalandi_dorsalis
ENSSFOG00015014964-9590.030ENSSPUG00000015741MSI110090.030Sphenodon_punctatus
ENSSFOG00015014964-9595.732ENSSPAG00000013098-10095.732Stegastes_partitus
ENSSFOG00015014964-6174.762ENSSPAG00000014085-10076.440Stegastes_partitus
ENSSFOG00015014964-9586.550ENSSSCG00000029365MSI110086.495Sus_scrofa
ENSSFOG00015014964-9587.941ENSTGUG00000009534MSI110087.941Taeniopygia_guttata
ENSSFOG00015014964-8291.244ENSTRUG00000016249MSI110082.609Takifugu_rubripes
ENSSFOG00015014964-9583.810ENSTRUG00000015636-8084.385Takifugu_rubripes
ENSSFOG00015014964-9565.060ENSTNIG00000019814-9467.774Tetraodon_nigroviridis
ENSSFOG00015014964-9789.728ENSTNIG00000011469MSI19489.728Tetraodon_nigroviridis
ENSSFOG00015014964-9577.289ENSTBEG00000007182MSI110077.289Tupaia_belangeri
ENSSFOG00015014964-7789.098ENSTTRG00000005663MSI17889.098Tursiops_truncatus
ENSSFOG00015014964-7188.889ENSUAMG00000015514MSI19488.889Ursus_americanus
ENSSFOG00015014964-9583.388ENSUMAG00000006176MSI18883.388Ursus_maritimus
ENSSFOG00015014964-9586.322ENSVVUG00000020993MSI110085.586Vulpes_vulpes
ENSSFOG00015014964-9587.195ENSXETG00000012216msi19487.500Xenopus_tropicalis
ENSSFOG00015014964-9876.331ENSXCOG00000017605MSI18977.744Xiphophorus_couchianus
ENSSFOG00015014964-9594.817ENSXMAG00000027103MSI19285.855Xiphophorus_maculatus
ENSSFOG00015014964-9595.122ENSXMAG00000018237-9495.122Xiphophorus_maculatus

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