EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015133 (Gene tree)
Gene ID: 108936867
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 24103 bases
Position: chrKV411125.1:504062-528164
Accession: 108936867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015023561	Exo_endo_phos	PF03372.23	8.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015023817	CNOT6-201	2341	XM_018756505	ENSSFOP00015023561	558 (aa)	XP_018612021	A0A0P7VPZ3

Gene Model

Click here to download ENSSFOG00015015133's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015133	CNOT6	63	30.141	ENSSFOG00015003468	pde12	58	30.199
ENSSFOG00015015133	CNOT6	100	91.756	ENSSFOG00015022383	cnot6a	96	91.756
ENSSFOG00015015133	CNOT6	100	74.910	ENSSFOG00015019044	cnot6l	100	74.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015133	CNOT6	100	87.993	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSSFOG00015015133	CNOT6	100	93.739	ENSAPOG00000009994	cnot6b	100	93.381	Acanthochromis_polyacanthus
ENSSFOG00015015133	CNOT6	100	88.214	ENSAMEG00000000949	CNOT6	99	87.679	Ailuropoda_melanoleuca
ENSSFOG00015015133	CNOT6	100	92.129	ENSACIG00000016566	cnot6b	100	91.771	Amphilophus_citrinellus
ENSSFOG00015015133	CNOT6	100	93.739	ENSAOCG00000006893	cnot6b	100	93.381	Amphiprion_ocellaris
ENSSFOG00015015133	CNOT6	100	93.739	ENSAPEG00000016949	cnot6b	100	93.381	Amphiprion_percula
ENSSFOG00015015133	CNOT6	100	91.771	ENSATEG00000007862	cnot6b	100	91.413	Anabas_testudineus
ENSSFOG00015015133	CNOT6	100	89.785	ENSAPLG00000012715	CNOT6	99	89.785	Anas_platyrhynchos
ENSSFOG00015015133	CNOT6	100	87.993	ENSACAG00000016548	CNOT6	100	87.993	Anolis_carolinensis
ENSSFOG00015015133	CNOT6	100	87.993	ENSANAG00000030436	CNOT6	96	87.993	Aotus_nancymaae
ENSSFOG00015015133	CNOT6	100	91.950	ENSACLG00000008279	cnot6b	100	92.487	Astatotilapia_calliptera
ENSSFOG00015015133	CNOT6	100	90.681	ENSAMXG00000034694	cnot6b	100	90.681	Astyanax_mexicanus
ENSSFOG00015015133	CNOT6	100	91.577	ENSAMXG00000019140	cnot6a	100	91.577	Astyanax_mexicanus
ENSSFOG00015015133	CNOT6	100	88.351	ENSBTAG00000017362	CNOT6	100	88.351	Bos_taurus
ENSSFOG00015015133	CNOT6	100	87.814	ENSCJAG00000009795	CNOT6	100	87.814	Callithrix_jacchus
ENSSFOG00015015133	CNOT6	100	88.530	ENSCAFG00000000464	CNOT6	100	88.530	Canis_familiaris
ENSSFOG00015015133	CNOT6	100	88.530	ENSCAFG00020002441	CNOT6	100	88.530	Canis_lupus_dingo
ENSSFOG00015015133	CNOT6	100	87.993	ENSCHIG00000019100	CNOT6	100	87.993	Capra_hircus
ENSSFOG00015015133	CNOT6	100	86.738	ENSTSYG00000003982	CNOT6	100	86.738	Carlito_syrichta
ENSSFOG00015015133	CNOT6	100	83.333	ENSCPOG00000035657	CNOT6	100	83.333	Cavia_porcellus
ENSSFOG00015015133	CNOT6	100	83.333	ENSCCAG00000033670	CNOT6	100	83.184	Cebus_capucinus
ENSSFOG00015015133	CNOT6	100	87.993	ENSCATG00000042014	CNOT6	100	87.993	Cercocebus_atys
ENSSFOG00015015133	CNOT6	100	87.276	ENSCLAG00000010489	CNOT6	100	87.276	Chinchilla_lanigera
ENSSFOG00015015133	CNOT6	100	87.993	ENSCSAG00000008165	CNOT6	100	87.993	Chlorocebus_sabaeus
ENSSFOG00015015133	CNOT6	100	87.993	ENSCHOG00000009680	CNOT6	100	87.993	Choloepus_hoffmanni
ENSSFOG00015015133	CNOT6	100	89.247	ENSCPBG00000008908	CNOT6	100	89.247	Chrysemys_picta_bellii
ENSSFOG00015015133	CNOT6	100	88.172	ENSCANG00000026756	CNOT6	100	88.172	Colobus_angolensis_palliatus
ENSSFOG00015015133	CNOT6	100	86.201	ENSCGRG00001011452	Cnot6	100	86.201	Cricetulus_griseus_chok1gshd
ENSSFOG00015015133	CNOT6	100	84.409	ENSCGRG00000010407	Cnot6	100	84.409	Cricetulus_griseus_crigri
ENSSFOG00015015133	CNOT6	100	92.844	ENSCSEG00000010939	cnot6b	100	92.487	Cynoglossus_semilaevis
ENSSFOG00015015133	CNOT6	100	91.413	ENSCVAG00000010538	cnot6b	100	91.055	Cyprinodon_variegatus
ENSSFOG00015015133	CNOT6	100	87.455	ENSDARG00000101072	cnot6b	100	87.455	Danio_rerio
ENSSFOG00015015133	CNOT6	100	91.577	ENSDARG00000008255	cnot6a	100	91.577	Danio_rerio
ENSSFOG00015015133	CNOT6	100	88.530	ENSDNOG00000041644	CNOT6	100	88.530	Dasypus_novemcinctus
ENSSFOG00015015133	CNOT6	100	79.928	ENSDORG00000001708	Cnot6	100	79.928	Dipodomys_ordii
ENSSFOG00015015133	CNOT6	100	70.841	ENSETEG00000006975	CNOT6	100	70.841	Echinops_telfairi
ENSSFOG00015015133	CNOT6	90	82.635	ENSEASG00005012957	-	99	81.836	Equus_asinus_asinus
ENSSFOG00015015133	CNOT6	100	88.172	ENSEASG00005012794	-	100	88.172	Equus_asinus_asinus
ENSSFOG00015015133	CNOT6	100	88.710	ENSECAG00000019325	CNOT6	100	88.710	Equus_caballus
ENSSFOG00015015133	CNOT6	100	82.796	ENSECAG00000012704	-	99	82.796	Equus_caballus
ENSSFOG00015015133	CNOT6	100	87.634	ENSEEUG00000015382	CNOT6	100	87.634	Erinaceus_europaeus
ENSSFOG00015015133	CNOT6	100	88.713	ENSELUG00000015981	cnot6b	99	88.007	Esox_lucius
ENSSFOG00015015133	CNOT6	100	87.993	ENSELUG00000024580	cnot6a	100	87.993	Esox_lucius
ENSSFOG00015015133	CNOT6	100	88.530	ENSFCAG00000001881	CNOT6	100	88.530	Felis_catus
ENSSFOG00015015133	CNOT6	100	89.964	ENSFALG00000007699	CNOT6	100	89.964	Ficedula_albicollis
ENSSFOG00015015133	CNOT6	100	86.738	ENSFDAG00000001999	CNOT6	100	86.738	Fukomys_damarensis
ENSSFOG00015015133	CNOT6	68	90.000	ENSFHEG00000013756	cnot6b	99	89.375	Fundulus_heteroclitus
ENSSFOG00015015133	CNOT6	95	91.493	ENSGMOG00000009767	cnot6b	99	91.493	Gadus_morhua
ENSSFOG00015015133	CNOT6	100	89.785	ENSGALG00000034316	CNOT6	100	89.785	Gallus_gallus
ENSSFOG00015015133	CNOT6	100	91.592	ENSGAFG00000008525	cnot6b	100	91.234	Gambusia_affinis
ENSSFOG00015015133	CNOT6	95	89.981	ENSGACG00000018046	cnot6b	99	89.981	Gasterosteus_aculeatus
ENSSFOG00015015133	CNOT6	100	73.882	ENSGAGG00000012176	CNOT6	100	73.882	Gopherus_agassizii
ENSSFOG00015015133	CNOT6	100	87.993	ENSGGOG00000003675	CNOT6	100	87.993	Gorilla_gorilla
ENSSFOG00015015133	CNOT6	100	92.129	ENSHBUG00000002819	cnot6b	100	92.665	Haplochromis_burtoni
ENSSFOG00015015133	CNOT6	100	86.918	ENSHGLG00000017756	CNOT6	100	86.918	Heterocephalus_glaber_female
ENSSFOG00015015133	CNOT6	100	86.918	ENSHGLG00100005747	CNOT6	100	86.918	Heterocephalus_glaber_male
ENSSFOG00015015133	CNOT6	100	90.519	ENSHCOG00000016176	cnot6b	100	91.055	Hippocampus_comes
ENSSFOG00015015133	CNOT6	100	90.681	ENSIPUG00000019831	cnot6a	100	90.681	Ictalurus_punctatus
ENSSFOG00015015133	CNOT6	100	90.143	ENSIPUG00000017482	cnot6b	100	90.143	Ictalurus_punctatus
ENSSFOG00015015133	CNOT6	100	87.993	ENSSTOG00000002803	CNOT6	100	87.993	Ictidomys_tridecemlineatus
ENSSFOG00015015133	CNOT6	100	86.918	ENSJJAG00000012296	Cnot6	100	86.918	Jaculus_jaculus
ENSSFOG00015015133	CNOT6	100	91.413	ENSKMAG00000004640	cnot6b	100	91.055	Kryptolebias_marmoratus
ENSSFOG00015015133	CNOT6	100	91.234	ENSLBEG00000027917	cnot6b	100	91.771	Labrus_bergylta
ENSSFOG00015015133	CNOT6	100	95.699	ENSLOCG00000010102	cnot6b	99	95.699	Lepisosteus_oculatus
ENSSFOG00015015133	CNOT6	100	89.068	ENSLAFG00000016742	CNOT6	100	89.068	Loxodonta_africana
ENSSFOG00015015133	CNOT6	100	87.993	ENSMFAG00000030867	CNOT6	100	87.993	Macaca_fascicularis
ENSSFOG00015015133	CNOT6	100	87.993	ENSMMUG00000018690	CNOT6	100	87.993	Macaca_mulatta
ENSSFOG00015015133	CNOT6	100	87.993	ENSMNEG00000038565	CNOT6	100	87.993	Macaca_nemestrina
ENSSFOG00015015133	CNOT6	100	87.993	ENSMLEG00000010555	CNOT6	100	87.993	Mandrillus_leucophaeus
ENSSFOG00015015133	CNOT6	100	93.918	ENSMAMG00000007515	cnot6b	100	93.560	Mastacembelus_armatus
ENSSFOG00015015133	CNOT6	100	91.950	ENSMZEG00005012899	cnot6b	100	92.487	Maylandia_zebra
ENSSFOG00015015133	CNOT6	100	87.097	ENSMAUG00000019798	Cnot6	100	87.097	Mesocricetus_auratus
ENSSFOG00015015133	CNOT6	100	86.380	ENSMICG00000013018	-	100	86.380	Microcebus_murinus
ENSSFOG00015015133	CNOT6	98	79.817	ENSMICG00000028378	-	99	79.817	Microcebus_murinus
ENSSFOG00015015133	CNOT6	100	87.097	ENSMOCG00000021662	Cnot6	100	87.097	Microtus_ochrogaster
ENSSFOG00015015133	CNOT6	100	89.606	ENSMMOG00000003227	cnot6b	100	89.606	Mola_mola
ENSSFOG00015015133	CNOT6	100	88.889	ENSMODG00000003979	CNOT6	100	88.889	Monodelphis_domestica
ENSSFOG00015015133	CNOT6	100	93.739	ENSMALG00000014251	cnot6b	100	93.381	Monopterus_albus
ENSSFOG00015015133	CNOT6	100	87.276	MGP_CAROLIEiJ_G0016277	Cnot6	100	87.276	Mus_caroli
ENSSFOG00015015133	CNOT6	100	87.276	ENSMUSG00000020362	Cnot6	100	87.276	Mus_musculus
ENSSFOG00015015133	CNOT6	100	87.276	MGP_PahariEiJ_G0017413	Cnot6	100	87.276	Mus_pahari
ENSSFOG00015015133	CNOT6	100	87.276	MGP_SPRETEiJ_G0017122	Cnot6	100	87.276	Mus_spretus
ENSSFOG00015015133	CNOT6	100	88.889	ENSMPUG00000000587	CNOT6	96	88.889	Mustela_putorius_furo
ENSSFOG00015015133	CNOT6	100	86.501	ENSMLUG00000010257	CNOT6	100	85.968	Myotis_lucifugus
ENSSFOG00015015133	CNOT6	100	86.559	ENSNGAG00000008269	Cnot6	100	86.559	Nannospalax_galili
ENSSFOG00015015133	CNOT6	100	92.129	ENSNBRG00000010798	cnot6b	100	92.665	Neolamprologus_brichardi
ENSSFOG00015015133	CNOT6	100	86.918	ENSNLEG00000002322	CNOT6	100	86.918	Nomascus_leucogenys
ENSSFOG00015015133	CNOT6	81	85.581	ENSMEUG00000000025	CNOT6	81	85.581	Notamacropus_eugenii
ENSSFOG00015015133	CNOT6	88	89.048	ENSOPRG00000008244	-	88	89.048	Ochotona_princeps
ENSSFOG00015015133	CNOT6	100	86.201	ENSODEG00000007041	CNOT6	100	86.201	Octodon_degus
ENSSFOG00015015133	CNOT6	75	93.617	ENSONIG00000013027	cnot6b	99	93.617	Oreochromis_niloticus
ENSSFOG00015015133	CNOT6	100	87.455	ENSOANG00000010226	CNOT6	100	87.455	Ornithorhynchus_anatinus
ENSSFOG00015015133	CNOT6	100	87.679	ENSOCUG00000011083	CNOT6	100	87.143	Oryctolagus_cuniculus
ENSSFOG00015015133	CNOT6	100	92.308	ENSORLG00000005059	cnot6b	100	91.950	Oryzias_latipes
ENSSFOG00015015133	CNOT6	100	92.308	ENSORLG00020012784	cnot6b	100	91.950	Oryzias_latipes_hni
ENSSFOG00015015133	CNOT6	94	91.778	ENSORLG00015022658	cnot6b	98	91.396	Oryzias_latipes_hsok
ENSSFOG00015015133	CNOT6	100	92.844	ENSOMEG00000005295	cnot6b	100	92.487	Oryzias_melastigma
ENSSFOG00015015133	CNOT6	94	87.238	ENSOGAG00000032470	CNOT6	100	86.667	Otolemur_garnettii
ENSSFOG00015015133	CNOT6	97	87.293	ENSOARG00000001003	CNOT6	100	86.740	Ovis_aries
ENSSFOG00015015133	CNOT6	100	87.993	ENSPPAG00000032253	CNOT6	100	87.993	Pan_paniscus
ENSSFOG00015015133	CNOT6	100	88.351	ENSPPRG00000011912	CNOT6	100	88.351	Panthera_pardus
ENSSFOG00015015133	CNOT6	100	88.351	ENSPTIG00000016794	CNOT6	100	88.351	Panthera_tigris_altaica
ENSSFOG00015015133	CNOT6	100	87.993	ENSPTRG00000017636	CNOT6	100	87.993	Pan_troglodytes
ENSSFOG00015015133	CNOT6	100	87.993	ENSPANG00000016191	CNOT6	100	87.993	Papio_anubis
ENSSFOG00015015133	CNOT6	100	94.086	ENSPKIG00000021368	cnot6b	100	94.086	Paramormyrops_kingsleyae
ENSSFOG00015015133	CNOT6	98	89.541	ENSPSIG00000017307	CNOT6	100	89.541	Pelodiscus_sinensis
ENSSFOG00015015133	CNOT6	100	92.308	ENSPMGG00000011238	cnot6b	100	91.950	Periophthalmus_magnuspinnatus
ENSSFOG00015015133	CNOT6	100	86.380	ENSPEMG00000000627	Cnot6	100	86.380	Peromyscus_maniculatus_bairdii
ENSSFOG00015015133	CNOT6	100	88.889	ENSPCIG00000020319	CNOT6	99	88.889	Phascolarctos_cinereus
ENSSFOG00015015133	CNOT6	100	91.950	ENSPFOG00000006291	cnot6b	100	91.592	Poecilia_formosa
ENSSFOG00015015133	CNOT6	100	88.372	ENSPLAG00000008266	cnot6b	100	88.014	Poecilia_latipinna
ENSSFOG00015015133	CNOT6	100	92.129	ENSPMEG00000009091	cnot6b	100	91.771	Poecilia_mexicana
ENSSFOG00015015133	CNOT6	100	90.877	ENSPREG00000003713	cnot6b	100	90.519	Poecilia_reticulata
ENSSFOG00015015133	CNOT6	100	87.993	ENSPPYG00000016137	CNOT6	100	87.993	Pongo_abelii
ENSSFOG00015015133	CNOT6	71	85.768	ENSPCAG00000005599	-	54	97.297	Procavia_capensis
ENSSFOG00015015133	CNOT6	100	82.796	ENSPCOG00000017359	CNOT6	100	83.513	Propithecus_coquereli
ENSSFOG00015015133	CNOT6	100	84.588	ENSPVAG00000003069	CNOT6	100	84.588	Pteropus_vampyrus
ENSSFOG00015015133	CNOT6	100	91.771	ENSPNYG00000000321	cnot6b	100	92.308	Pundamilia_nyererei
ENSSFOG00015015133	CNOT6	100	91.935	ENSPNAG00000028816	cnot6b	100	91.935	Pygocentrus_nattereri
ENSSFOG00015015133	CNOT6	100	92.115	ENSPNAG00000029586	cnot6a	100	92.115	Pygocentrus_nattereri
ENSSFOG00015015133	CNOT6	100	86.559	ENSRNOG00000054891	Cnot6	100	86.559	Rattus_norvegicus
ENSSFOG00015015133	CNOT6	100	87.814	ENSRBIG00000004309	CNOT6	100	87.814	Rhinopithecus_bieti
ENSSFOG00015015133	CNOT6	100	87.814	ENSRROG00000035378	CNOT6	100	87.814	Rhinopithecus_roxellana
ENSSFOG00015015133	CNOT6	100	87.993	ENSSBOG00000030494	CNOT6	100	87.993	Saimiri_boliviensis_boliviensis
ENSSFOG00015015133	CNOT6	100	88.889	ENSSHAG00000017436	CNOT6	100	88.889	Sarcophilus_harrisii
ENSSFOG00015015133	CNOT6	100	91.950	ENSSMAG00000003084	cnot6b	100	91.592	Scophthalmus_maximus
ENSSFOG00015015133	CNOT6	100	93.918	ENSSDUG00000004151	cnot6b	100	93.560	Seriola_dumerili
ENSSFOG00015015133	CNOT6	100	93.023	ENSSLDG00000004448	cnot6b	100	93.560	Seriola_lalandi_dorsalis
ENSSFOG00015015133	CNOT6	64	68.524	ENSSARG00000012650	-	100	68.524	Sorex_araneus
ENSSFOG00015015133	CNOT6	100	89.068	ENSSPUG00000007893	CNOT6	100	89.068	Sphenodon_punctatus
ENSSFOG00015015133	CNOT6	100	93.918	ENSSPAG00000000149	cnot6b	100	93.560	Stegastes_partitus
ENSSFOG00015015133	CNOT6	100	88.172	ENSSSCG00000014009	CNOT6	100	88.172	Sus_scrofa
ENSSFOG00015015133	CNOT6	100	89.606	ENSTGUG00000001119	CNOT6	100	89.606	Taeniopygia_guttata
ENSSFOG00015015133	CNOT6	100	89.247	ENSTRUG00000002818	cnot6b	100	89.247	Takifugu_rubripes
ENSSFOG00015015133	CNOT6	100	90.323	ENSTNIG00000004443	cnot6b	99	90.323	Tetraodon_nigroviridis
ENSSFOG00015015133	CNOT6	76	74.627	ENSTBEG00000017094	-	87	74.627	Tupaia_belangeri
ENSSFOG00015015133	CNOT6	100	88.172	ENSTTRG00000009363	CNOT6	100	88.172	Tursiops_truncatus
ENSSFOG00015015133	CNOT6	90	77.336	ENSUAMG00000004579	CNOT6	88	86.279	Ursus_americanus
ENSSFOG00015015133	CNOT6	100	84.274	ENSUMAG00000024577	CNOT6	100	84.274	Ursus_maritimus
ENSSFOG00015015133	CNOT6	84	94.595	ENSVPAG00000003593	CNOT6	83	94.595	Vicugna_pacos
ENSSFOG00015015133	CNOT6	100	88.530	ENSVVUG00000026940	CNOT6	100	88.530	Vulpes_vulpes
ENSSFOG00015015133	CNOT6	100	88.730	ENSXCOG00000003360	cnot6b	100	88.372	Xiphophorus_couchianus
ENSSFOG00015015133	CNOT6	100	92.129	ENSXMAG00000008730	cnot6b	100	91.771	Xiphophorus_maculatus