EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015169 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: sfrs6|sfrs6b|wu:faa54g02|wu:fc17h09|zgc:103497
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6429 bases
Position: chrKV410824.1:991972-998400
Accession: 108923420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015023643	RRM_1	PF00076.22	1.4e-31	1	2
ENSSFOP00015023643	RRM_1	PF00076.22	1.4e-31	2	2
ENSSFOP00015023648	RRM_1	PF00076.22	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015023902	SRSF6-201	924	XM_018734145	ENSSFOP00015023643	307 (aa)	XP_018589661	-
ENSSFOT00015023907	SRSF6-202	2745	-	ENSSFOP00015023648	238 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015015169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015169	SRSF6	55	40.462	ENSSFOG00015017303	srsf9	66	40.230
ENSSFOG00015015169	SRSF6	58	64.674	ENSSFOG00015008377	srsf5	65	63.736
ENSSFOG00015015169	SRSF6	63	41.872	ENSSFOG00015004989	-	59	44.186
ENSSFOG00015015169	SRSF6	58	41.053	ENSSFOG00015002476	SRSF9	72	39.153
ENSSFOG00015015169	SRSF6	59	87.047	ENSSFOG00015019681	-	52	86.979
ENSSFOG00015015169	SRSF6	54	43.023	ENSSFOG00015004800	srsf1a	65	43.605
ENSSFOG00015015169	SRSF6	59	76.243	ENSSFOG00015020292	srsf4	82	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015169	SRSF6	60	89.130	ENSG00000124193	SRSF6	55	93.243	Homo_sapiens
ENSSFOG00015015169	SRSF6	92	78.472	ENSACIG00000023658	-	55	94.915	Amphilophus_citrinellus
ENSSFOG00015015169	SRSF6	78	79.253	ENSACIG00000020091	-	95	81.890	Amphilophus_citrinellus
ENSSFOG00015015169	SRSF6	59	86.813	ENSAOCG00000004309	-	56	86.667	Amphiprion_ocellaris
ENSSFOG00015015169	SRSF6	61	84.211	ENSAPEG00000020746	-	64	84.615	Amphiprion_percula
ENSSFOG00015015169	SRSF6	59	93.514	ENSAPEG00000013086	-	53	92.350	Amphiprion_percula
ENSSFOG00015015169	SRSF6	59	84.530	ENSATEG00000007255	-	70	81.319	Anabas_testudineus
ENSSFOG00015015169	SRSF6	60	89.130	ENSANAG00000024080	SRSF6	55	93.243	Aotus_nancymaae
ENSSFOG00015015169	SRSF6	59	88.172	ENSAMXG00000042692	-	96	83.704	Astyanax_mexicanus
ENSSFOG00015015169	SRSF6	81	91.398	ENSAMXG00000003101	-	67	75.889	Astyanax_mexicanus
ENSSFOG00015015169	SRSF6	60	89.130	ENSBTAG00000008527	SRSF6	55	94.595	Bos_taurus
ENSSFOG00015015169	SRSF6	60	89.130	ENSCJAG00000048403	SRSF6	67	90.055	Callithrix_jacchus
ENSSFOG00015015169	SRSF6	60	89.130	ENSCAFG00000009289	SRSF6	55	94.595	Canis_familiaris
ENSSFOG00015015169	SRSF6	60	89.130	ENSCAFG00020013559	SRSF6	55	94.595	Canis_lupus_dingo
ENSSFOG00015015169	SRSF6	60	89.130	ENSCHIG00000015890	-	55	94.595	Capra_hircus
ENSSFOG00015015169	SRSF6	60	83.696	ENSCPOG00000011761	SRSF6	55	93.243	Cavia_porcellus
ENSSFOG00015015169	SRSF6	60	78.378	ENSCCAG00000018540	-	60	78.022	Cebus_capucinus
ENSSFOG00015015169	SRSF6	60	89.130	ENSCCAG00000026018	-	55	93.243	Cebus_capucinus
ENSSFOG00015015169	SRSF6	60	89.130	ENSCATG00000030794	SRSF6	55	93.243	Cercocebus_atys
ENSSFOG00015015169	SRSF6	60	89.130	ENSCLAG00000010247	SRSF6	55	93.243	Chinchilla_lanigera
ENSSFOG00015015169	SRSF6	60	89.130	ENSCGRG00001022339	Srsf6	55	93.243	Cricetulus_griseus_chok1gshd
ENSSFOG00015015169	SRSF6	59	89.305	ENSDARG00000016783	srsf6b	81	94.805	Danio_rerio
ENSSFOG00015015169	SRSF6	60	89.130	ENSDORG00000028378	Srsf6	55	93.243	Dipodomys_ordii
ENSSFOG00015015169	SRSF6	60	89.130	ENSECAG00000023932	SRSF6	56	90.055	Equus_caballus
ENSSFOG00015015169	SRSF6	93	78.397	ENSELUG00000013506	SRSF6	69	90.909	Esox_lucius
ENSSFOG00015015169	SRSF6	100	77.460	ENSELUG00000024182	SRSF6	90	84.553	Esox_lucius
ENSSFOG00015015169	SRSF6	93	79.032	ENSFHEG00000023065	srsf6a	78	77.308	Fundulus_heteroclitus
ENSSFOG00015015169	SRSF6	84	82.011	ENSGMOG00000014458	srsf6a	60	69.955	Gadus_morhua
ENSSFOG00015015169	SRSF6	59	88.770	ENSGALG00000000990	SRSF6	84	69.257	Gallus_gallus
ENSSFOG00015015169	SRSF6	93	66.763	ENSGACG00000006084	srsf6a	52	87.432	Gasterosteus_aculeatus
ENSSFOG00015015169	SRSF6	60	89.130	ENSGGOG00000009808	SRSF6	55	93.243	Gorilla_gorilla
ENSSFOG00015015169	SRSF6	73	78.298	ENSHBUG00000006386	-	57	86.667	Haplochromis_burtoni
ENSSFOG00015015169	SRSF6	60	89.130	ENSHGLG00000007348	SRSF6	55	93.243	Heterocephalus_glaber_female
ENSSFOG00015015169	SRSF6	62	71.503	ENSHGLG00000007701	-	56	70.000	Heterocephalus_glaber_female
ENSSFOG00015015169	SRSF6	90	74.913	ENSHCOG00000002740	srsf6a	56	86.667	Hippocampus_comes
ENSSFOG00015015169	SRSF6	59	90.710	ENSIPUG00000004776	-	63	91.713	Ictalurus_punctatus
ENSSFOG00015015169	SRSF6	60	89.130	ENSSTOG00000010866	SRSF6	55	93.243	Ictidomys_tridecemlineatus
ENSSFOG00015015169	SRSF6	93	78.947	ENSKMAG00000011934	srsf6a	58	90.000	Kryptolebias_marmoratus
ENSSFOG00015015169	SRSF6	59	88.587	ENSLBEG00000007356	srsf6a	51	88.525	Labrus_bergylta
ENSSFOG00015015169	SRSF6	93	73.548	ENSLACG00000005466	SRSF6	71	71.901	Latimeria_chalumnae
ENSSFOG00015015169	SRSF6	60	89.130	ENSMFAG00000036925	SRSF6	55	93.243	Macaca_fascicularis
ENSSFOG00015015169	SRSF6	60	89.130	ENSMMUG00000006742	SRSF6	55	93.243	Macaca_mulatta
ENSSFOG00015015169	SRSF6	60	89.130	ENSMNEG00000027392	-	55	93.243	Macaca_nemestrina
ENSSFOG00015015169	SRSF6	59	92.973	ENSMAMG00000017161	srsf6a	68	78.243	Mastacembelus_armatus
ENSSFOG00015015169	SRSF6	82	70.635	ENSMZEG00005008032	-	81	70.155	Maylandia_zebra
ENSSFOG00015015169	SRSF6	59	86.111	ENSMZEG00005020658	-	60	86.111	Maylandia_zebra
ENSSFOG00015015169	SRSF6	60	88.587	ENSMICG00000008537	SRSF6	55	93.243	Microcebus_murinus
ENSSFOG00015015169	SRSF6	60	88.108	ENSMODG00000003107	SRSF6	85	70.242	Monodelphis_domestica
ENSSFOG00015015169	SRSF6	60	89.130	MGP_CAROLIEiJ_G0024606	Srsf6	55	93.243	Mus_caroli
ENSSFOG00015015169	SRSF6	60	89.130	ENSMUSG00000016921	Srsf6	55	93.243	Mus_musculus
ENSSFOG00015015169	SRSF6	60	89.130	MGP_PahariEiJ_G0026050	Srsf6	55	93.243	Mus_pahari
ENSSFOG00015015169	SRSF6	60	89.130	MGP_SPRETEiJ_G0025528	Srsf6	55	93.243	Mus_spretus
ENSSFOG00015015169	SRSF6	60	89.130	ENSMPUG00000017692	SRSF6	63	90.055	Mustela_putorius_furo
ENSSFOG00015015169	SRSF6	60	66.667	ENSMLUG00000016618	SRSF6	52	60.870	Myotis_lucifugus
ENSSFOG00015015169	SRSF6	60	89.130	ENSNGAG00000017560	Srsf6	55	93.243	Nannospalax_galili
ENSSFOG00015015169	SRSF6	59	92.896	ENSNBRG00000001846	-	95	61.176	Neolamprologus_brichardi
ENSSFOG00015015169	SRSF6	59	85.165	ENSNBRG00000014709	-	57	86.667	Neolamprologus_brichardi
ENSSFOG00015015169	SRSF6	60	89.130	ENSNLEG00000006524	SRSF6	55	93.243	Nomascus_leucogenys
ENSSFOG00015015169	SRSF6	60	88.108	ENSMEUG00000014615	SRSF6	75	76.652	Notamacropus_eugenii
ENSSFOG00015015169	SRSF6	59	90.710	ENSONIG00000001925	-	82	76.289	Oreochromis_niloticus
ENSSFOG00015015169	SRSF6	59	87.432	ENSONIG00000020247	-	52	87.293	Oreochromis_niloticus
ENSSFOG00015015169	SRSF6	58	53.333	ENSOCUG00000023999	-	70	53.672	Oryctolagus_cuniculus
ENSSFOG00015015169	SRSF6	60	79.348	ENSORLG00000003530	srsf6a	64	74.000	Oryzias_latipes
ENSSFOG00015015169	SRSF6	50	71.429	ENSORLG00020017506	srsf6a	90	70.779	Oryzias_latipes_hni
ENSSFOG00015015169	SRSF6	60	78.804	ENSORLG00015009410	srsf6a	64	74.000	Oryzias_latipes_hsok
ENSSFOG00015015169	SRSF6	60	75.956	ENSOMEG00000006001	srsf6a	57	76.923	Oryzias_melastigma
ENSSFOG00015015169	SRSF6	60	89.130	ENSPTRG00000044686	-	55	93.243	Pan_troglodytes
ENSSFOG00015015169	SRSF6	60	89.130	ENSPANG00000035224	SRSF6	55	93.243	Papio_anubis
ENSSFOG00015015169	SRSF6	58	75.000	ENSPKIG00000015703	-	95	61.486	Paramormyrops_kingsleyae
ENSSFOG00015015169	SRSF6	93	79.322	ENSPKIG00000018463	-	76	98.701	Paramormyrops_kingsleyae
ENSSFOG00015015169	SRSF6	58	60.656	ENSPKIG00000015618	-	58	84.615	Paramormyrops_kingsleyae
ENSSFOG00015015169	SRSF6	93	75.329	ENSPMGG00000014963	srsf6a	54	94.475	Periophthalmus_magnuspinnatus
ENSSFOG00015015169	SRSF6	60	88.108	ENSPCIG00000003820	SRSF6	85	70.588	Phascolarctos_cinereus
ENSSFOG00015015169	SRSF6	59	88.172	ENSPLAG00000009243	srsf6a	80	83.465	Poecilia_latipinna
ENSSFOG00015015169	SRSF6	60	87.500	ENSPCAG00000010954	SRSF6	55	88.398	Procavia_capensis
ENSSFOG00015015169	SRSF6	60	88.587	ENSPCOG00000026364	SRSF6	55	93.243	Propithecus_coquereli
ENSSFOG00015015169	SRSF6	59	85.165	ENSPNYG00000004944	-	57	86.667	Pundamilia_nyererei
ENSSFOG00015015169	SRSF6	59	92.896	ENSPNYG00000011272	-	66	79.583	Pundamilia_nyererei
ENSSFOG00015015169	SRSF6	60	90.710	ENSRBIG00000041414	SRSF6	57	93.243	Rhinopithecus_bieti
ENSSFOG00015015169	SRSF6	60	89.130	ENSRROG00000029989	SRSF6	55	93.243	Rhinopithecus_roxellana
ENSSFOG00015015169	SRSF6	59	72.778	ENSSBOG00000034078	-	54	72.778	Saimiri_boliviensis_boliviensis
ENSSFOG00015015169	SRSF6	60	89.130	ENSSBOG00000033708	-	55	93.243	Saimiri_boliviensis_boliviensis
ENSSFOG00015015169	SRSF6	60	88.108	ENSSHAG00000012805	SRSF6	85	70.588	Sarcophilus_harrisii
ENSSFOG00015015169	SRSF6	64	75.500	ENSSMAG00000014819	-	84	66.825	Scophthalmus_maximus
ENSSFOG00015015169	SRSF6	59	81.215	ENSSMAG00000017447	-	55	81.667	Scophthalmus_maximus
ENSSFOG00015015169	SRSF6	59	92.973	ENSSDUG00000016097	srsf6a	93	71.296	Seriola_dumerili
ENSSFOG00015015169	SRSF6	59	92.973	ENSSLDG00000022841	srsf6a	93	71.605	Seriola_lalandi_dorsalis
ENSSFOG00015015169	SRSF6	59	90.110	ENSSPUG00000004967	SRSF6	55	93.243	Sphenodon_punctatus
ENSSFOG00015015169	SRSF6	93	74.570	ENSSPAG00000002362	srsf6a	91	71.821	Stegastes_partitus
ENSSFOG00015015169	SRSF6	60	89.130	ENSSSCG00000007362	SRSF6	65	85.787	Sus_scrofa
ENSSFOG00015015169	SRSF6	59	88.587	ENSTGUG00000003455	SRSF6	84	68.942	Taeniopygia_guttata
ENSSFOG00015015169	SRSF6	92	73.529	ENSTNIG00000001692	srsf6a	61	86.000	Tetraodon_nigroviridis
ENSSFOG00015015169	SRSF6	60	89.130	ENSUAMG00000003559	SRSF6	55	94.595	Ursus_americanus
ENSSFOG00015015169	SRSF6	93	74.919	ENSXMAG00000021849	srsf6a	54	92.778	Xiphophorus_maculatus