EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015336 (Gene tree)
Gene ID: 108932906
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 8853 bases
Position: chrKV411003.1:8126599-8135451
Accession: 108932906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015023864	MMR_HSR1	PF01926.23	0.00016	1	1
ENSSFOP00015023880	MMR_HSR1	PF01926.23	0.00016	1	1
ENSSFOP00015023886	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024146	-	782	-	ENSSFOP00015023886	213 (aa)	-	A0A1W4ZN71
ENSSFOT00015024140	-	2622	-	ENSSFOP00015023880	213 (aa)	-	A0A1W4ZN71
ENSSFOT00015024125	-	1725	XM_018749621	ENSSFOP00015023864	213 (aa)	XP_018605137	A0A1W4ZN71
ENSSFOT00015024159	-	552	-	ENSSFOP00015023900	183 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015015336's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015336	rab4a	98	59.330	ENSSFOG00015012785	rab14	97	59.330
ENSSFOG00015015336	rab4a	84	33.702	ENSSFOG00015016000	-	84	33.702
ENSSFOG00015015336	rab4a	82	37.430	ENSSFOG00015009566	si:dkey-13a21.4	85	37.931
ENSSFOG00015015336	rab4a	80	34.857	ENSSFOG00015003259	rab9a	82	34.857
ENSSFOG00015015336	rab4a	74	35.625	ENSSFOG00015004325	rab34a	62	35.625
ENSSFOG00015015336	rab4a	89	34.031	ENSSFOG00015009244	rab39bb	88	34.031
ENSSFOG00015015336	rab4a	78	44.970	ENSSFOG00015006414	-	79	44.970
ENSSFOG00015015336	rab4a	76	31.481	ENSSFOG00015006846	-	86	31.481
ENSSFOG00015015336	rab4a	86	42.935	ENSSFOG00015017444	rab18a	74	42.935
ENSSFOG00015015336	rab4a	76	43.478	ENSSFOG00015021115	-	75	43.478
ENSSFOG00015015336	rab4a	55	30.833	ENSSFOG00015023529	arl5c	66	30.833
ENSSFOG00015015336	rab4a	87	57.527	ENSSFOG00015015034	rab2a	88	57.527
ENSSFOG00015015336	rab4a	81	40.698	ENSSFOG00015009988	-	78	40.698
ENSSFOG00015015336	rab4a	84	37.158	ENSSFOG00015021180	RAB7A	88	37.158
ENSSFOG00015015336	rab4a	81	37.853	ENSSFOG00015005076	zgc:100918	86	37.853
ENSSFOG00015015336	rab4a	87	33.161	ENSSFOG00015016156	rab36	75	33.161
ENSSFOG00015015336	rab4a	80	34.091	ENSSFOG00015020074	DNAJC27	64	34.091
ENSSFOG00015015336	rab4a	74	40.506	ENSSFOG00015002077	rab6a	76	40.506
ENSSFOG00015015336	rab4a	81	32.203	ENSSFOG00015014992	rhebl1	92	32.203
ENSSFOG00015015336	rab4a	100	34.419	ENSSFOG00015020732	rab42a	100	34.419
ENSSFOG00015015336	rab4a	72	33.333	ENSSFOG00015020738	rabl2	67	33.333
ENSSFOG00015015336	rab4a	53	30.769	ENSSFOG00015020131	arl8bb	63	30.769
ENSSFOG00015015336	rab4a	81	48.256	ENSSFOG00015021754	rab13	86	48.256
ENSSFOG00015015336	rab4a	75	53.750	ENSSFOG00015008618	rab11al	74	53.750
ENSSFOG00015015336	rab4a	76	43.478	ENSSFOG00015014517	rab5a	75	43.478
ENSSFOG00015015336	rab4a	80	36.000	ENSSFOG00015000053	rab9a	80	36.000
ENSSFOG00015015336	rab4a	82	38.286	ENSSFOG00015011268	RAB41	83	38.286
ENSSFOG00015015336	rab4a	98	33.645	ENSSFOG00015012088	rab42	96	33.645
ENSSFOG00015015336	rab4a	76	40.373	ENSSFOG00015012085	rab22a	83	40.373
ENSSFOG00015015336	rab4a	81	38.418	ENSSFOG00015011771	-	86	38.418
ENSSFOG00015015336	rab4a	97	53.589	ENSSFOG00015000865	-	99	53.589
ENSSFOG00015015336	rab4a	84	37.705	ENSSFOG00015020012	rab7a	88	37.705
ENSSFOG00015015336	rab4a	98	59.524	ENSSFOG00015011318	-	97	59.524
ENSSFOG00015015336	rab4a	76	32.099	ENSSFOG00015003051	hrasb	85	32.099
ENSSFOG00015015336	rab4a	73	36.025	ENSSFOG00015004253	rab33a	72	36.025
ENSSFOG00015015336	rab4a	97	35.545	ENSSFOG00015006175	zgc:101559	85	35.545
ENSSFOG00015015336	rab4a	82	37.714	ENSSFOG00015004941	rab41	81	37.714
ENSSFOG00015015336	rab4a	89	45.789	ENSSFOG00015020836	rab1ba	90	45.789
ENSSFOG00015015336	rab4a	76	39.521	ENSSFOG00015020112	rab33b	77	39.521
ENSSFOG00015015336	rab4a	76	31.481	ENSSFOG00015011157	-	85	31.481
ENSSFOG00015015336	rab4a	74	40.506	ENSSFOG00015019202	RAB6B	76	40.506
ENSSFOG00015015336	rab4a	74	35.000	ENSSFOG00015005188	rab34	62	35.000
ENSSFOG00015015336	rab4a	53	30.769	ENSSFOG00015019411	arl8ba	54	30.769
ENSSFOG00015015336	rab4a	100	37.559	ENSSFOG00015017296	rab15	100	37.559
ENSSFOG00015015336	rab4a	72	35.065	ENSSFOG00015012604	rab23	78	34.783
ENSSFOG00015015336	rab4a	80	52.632	ENSSFOG00015009042	rab11bb	77	52.632
ENSSFOG00015015336	rab4a	88	45.503	ENSSFOG00015005464	zgc:171927	89	45.503
ENSSFOG00015015336	rab4a	89	43.229	ENSSFOG00015003628	-	90	43.229
ENSSFOG00015015336	rab4a	80	39.181	ENSSFOG00015006245	-	75	39.181
ENSSFOG00015015336	rab4a	100	39.070	ENSSFOG00015018421	rab39b	100	39.070
ENSSFOG00015015336	rab4a	78	31.073	ENSSFOG00015023790	rheb	83	32.051
ENSSFOG00015015336	rab4a	85	37.234	ENSSFOG00015010492	rab9b	91	37.234
ENSSFOG00015015336	rab4a	98	43.269	ENSSFOG00015008657	rab25a	94	43.269
ENSSFOG00015015336	rab4a	80	53.801	ENSSFOG00015024042	rab11a	78	53.801
ENSSFOG00015015336	rab4a	81	31.638	ENSSFOG00015023903	KRAS	93	31.638
ENSSFOG00015015336	rab4a	89	45.263	ENSSFOG00015001293	rab1ab	89	45.263
ENSSFOG00015015336	rab4a	75	31.395	ENSSFOG00015019261	rasl11a	67	31.395
ENSSFOG00015015336	rab4a	84	33.333	ENSSFOG00015017512	dnajc27	67	33.333
ENSSFOG00015015336	rab4a	89	45.263	ENSSFOG00015011140	-	88	45.263
ENSSFOG00015015336	rab4a	70	30.464	ENSSFOG00015020319	mras	84	31.288
ENSSFOG00015015336	rab4a	53	30.769	ENSSFOG00015021537	arl8a	59	30.769
ENSSFOG00015015336	rab4a	87	36.316	ENSSFOG00015024034	rab33ba	91	36.316
ENSSFOG00015015336	rab4a	85	38.122	ENSSFOG00015021448	-	86	38.122
ENSSFOG00015015336	rab4a	76	43.210	ENSSFOG00015006076	rab35	80	43.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015336	rab4a	100	94.366	ENSCVAG00000010727	rab4a	100	94.366	Cyprinodon_variegatus
ENSSFOG00015015336	rab4a	100	97.653	ENSELUG00000014785	rab4a	100	97.653	Esox_lucius
ENSSFOG00015015336	rab4a	100	94.836	ENSFHEG00000010509	rab4a	100	94.836	Fundulus_heteroclitus
ENSSFOG00015015336	rab4a	100	94.366	ENSGAFG00000005477	rab4a	100	94.366	Gambusia_affinis
ENSSFOG00015015336	rab4a	100	94.393	ENSGACG00000016164	rab4a	98	94.393	Gasterosteus_aculeatus
ENSSFOG00015015336	rab4a	100	94.836	ENSKMAG00000020250	rab4a	100	94.836	Kryptolebias_marmoratus
ENSSFOG00015015336	rab4a	100	95.305	ENSLBEG00000003101	rab4a	100	95.305	Labrus_bergylta
ENSSFOG00015015336	rab4a	100	93.897	ENSMMOG00000015287	rab4a	100	93.897	Mola_mola
ENSSFOG00015015336	rab4a	100	94.366	ENSPFOG00000014630	rab4a	100	94.366	Poecilia_formosa
ENSSFOG00015015336	rab4a	100	94.366	ENSPLAG00000014563	rab4a	100	94.366	Poecilia_latipinna
ENSSFOG00015015336	rab4a	100	94.366	ENSPMEG00000012205	rab4a	100	94.366	Poecilia_mexicana
ENSSFOG00015015336	rab4a	100	94.366	ENSPREG00000010154	rab4a	100	94.366	Poecilia_reticulata
ENSSFOG00015015336	rab4a	100	94.366	ENSXMAG00000026193	rab4a	100	94.366	Xiphophorus_maculatus