EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015015415 (Gene tree)
Gene ID: 108925022
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 9053 bases
Position: chrKV410839.1:1190012-1199064
Accession: 108925022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015023979	MRP-S27	PF10037.9	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024239	-	3164	XM_018736721	ENSSFOP00015023979	381 (aa)	XP_018592237	A0A1W4YKZ7

Gene Model

Click here to download ENSSFOG00015015415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015415	ptcd2	86	47.147	ENSG00000049883	PTCD2	94	44.211	Homo_sapiens
ENSSFOG00015015415	ptcd2	100	52.604	ENSAPOG00000020682	ptcd2	100	52.604	Acanthochromis_polyacanthus
ENSSFOG00015015415	ptcd2	89	46.377	ENSAMEG00000007194	PTCD2	89	46.377	Ailuropoda_melanoleuca
ENSSFOG00015015415	ptcd2	90	52.299	ENSACIG00000002053	ptcd2	100	52.299	Amphilophus_citrinellus
ENSSFOG00015015415	ptcd2	100	53.385	ENSAOCG00000006616	ptcd2	98	53.385	Amphiprion_ocellaris
ENSSFOG00015015415	ptcd2	100	53.385	ENSAPEG00000022926	ptcd2	98	53.385	Amphiprion_percula
ENSSFOG00015015415	ptcd2	92	51.549	ENSACAG00000009747	PTCD2	91	51.549	Anolis_carolinensis
ENSSFOG00015015415	ptcd2	87	46.884	ENSANAG00000029353	PTCD2	87	46.884	Aotus_nancymaae
ENSSFOG00015015415	ptcd2	100	53.646	ENSACLG00000027742	ptcd2	98	53.646	Astatotilapia_calliptera
ENSSFOG00015015415	ptcd2	94	47.658	ENSAMXG00000029404	ptcd2	94	47.658	Astyanax_mexicanus
ENSSFOG00015015415	ptcd2	96	45.161	ENSBTAG00000014675	PTCD2	97	45.161	Bos_taurus
ENSSFOG00015015415	ptcd2	86	46.547	ENSCJAG00000016364	PTCD2	86	46.547	Callithrix_jacchus
ENSSFOG00015015415	ptcd2	84	50.464	ENSCAFG00000007982	PTCD2	76	50.464	Canis_familiaris
ENSSFOG00015015415	ptcd2	83	50.313	ENSCAFG00020019147	PTCD2	90	50.313	Canis_lupus_dingo
ENSSFOG00015015415	ptcd2	84	48.297	ENSCHIG00000017118	PTCD2	84	48.297	Capra_hircus
ENSSFOG00015015415	ptcd2	86	48.193	ENSCPOG00000040168	PTCD2	87	48.193	Cavia_porcellus
ENSSFOG00015015415	ptcd2	73	48.421	ENSCCAG00000021996	-	88	48.421	Cebus_capucinus
ENSSFOG00015015415	ptcd2	86	45.946	ENSCCAG00000029389	-	86	45.946	Cebus_capucinus
ENSSFOG00015015415	ptcd2	92	46.348	ENSCATG00000019069	PTCD2	92	46.348	Cercocebus_atys
ENSSFOG00015015415	ptcd2	93	45.833	ENSCLAG00000000072	PTCD2	94	45.833	Chinchilla_lanigera
ENSSFOG00015015415	ptcd2	91	47.309	ENSCSAG00000015623	PTCD2	94	47.107	Chlorocebus_sabaeus
ENSSFOG00015015415	ptcd2	67	51.765	ENSCHOG00000010634	PTCD2	74	51.765	Choloepus_hoffmanni
ENSSFOG00015015415	ptcd2	92	50.423	ENSCPBG00000000216	PTCD2	91	50.423	Chrysemys_picta_bellii
ENSSFOG00015015415	ptcd2	93	46.832	ENSCANG00000035636	PTCD2	93	46.832	Colobus_angolensis_palliatus
ENSSFOG00015015415	ptcd2	91	47.009	ENSCGRG00001015289	Ptcd2	77	47.009	Cricetulus_griseus_chok1gshd
ENSSFOG00015015415	ptcd2	91	47.009	ENSCGRG00000006193	Ptcd2	77	47.009	Cricetulus_griseus_crigri
ENSSFOG00015015415	ptcd2	100	54.663	ENSCVAG00000001285	ptcd2	98	54.663	Cyprinodon_variegatus
ENSSFOG00015015415	ptcd2	92	50.568	ENSDARG00000035391	ptcd2	92	50.568	Danio_rerio
ENSSFOG00015015415	ptcd2	93	47.075	ENSDNOG00000008719	PTCD2	94	47.075	Dasypus_novemcinctus
ENSSFOG00015015415	ptcd2	91	46.286	ENSDORG00000004921	Ptcd2	90	46.286	Dipodomys_ordii
ENSSFOG00015015415	ptcd2	91	45.170	ENSETEG00000016542	PTCD2	90	45.170	Echinops_telfairi
ENSSFOG00015015415	ptcd2	88	47.041	ENSEASG00005018038	PTCD2	88	47.041	Equus_asinus_asinus
ENSSFOG00015015415	ptcd2	93	45.833	ENSECAG00000007022	PTCD2	93	45.833	Equus_caballus
ENSSFOG00015015415	ptcd2	85	46.809	ENSEEUG00000014031	PTCD2	85	46.809	Erinaceus_europaeus
ENSSFOG00015015415	ptcd2	100	55.065	ENSELUG00000003584	ptcd2	100	55.065	Esox_lucius
ENSSFOG00015015415	ptcd2	75	49.650	ENSFCAG00000045432	PTCD2	67	49.650	Felis_catus
ENSSFOG00015015415	ptcd2	83	47.962	ENSFALG00000010299	PTCD2	97	47.962	Ficedula_albicollis
ENSSFOG00015015415	ptcd2	92	45.352	ENSFDAG00000018461	PTCD2	93	45.352	Fukomys_damarensis
ENSSFOG00015015415	ptcd2	99	51.429	ENSGMOG00000003637	ptcd2	99	51.429	Gadus_morhua
ENSSFOG00015015415	ptcd2	92	49.008	ENSGALG00000038260	PTCD2	92	49.008	Gallus_gallus
ENSSFOG00015015415	ptcd2	100	51.554	ENSGAGG00000021952	PTCD2	98	51.554	Gopherus_agassizii
ENSSFOG00015015415	ptcd2	86	47.147	ENSGGOG00000010695	PTCD2	86	47.147	Gorilla_gorilla
ENSSFOG00015015415	ptcd2	100	53.906	ENSHBUG00000009191	ptcd2	98	53.906	Haplochromis_burtoni
ENSSFOG00015015415	ptcd2	86	48.348	ENSHGLG00000001234	PTCD2	87	48.348	Heterocephalus_glaber_female
ENSSFOG00015015415	ptcd2	86	48.348	ENSHGLG00100015419	PTCD2	87	48.348	Heterocephalus_glaber_male
ENSSFOG00015015415	ptcd2	100	51.546	ENSHCOG00000001703	ptcd2	100	51.546	Hippocampus_comes
ENSSFOG00015015415	ptcd2	92	49.435	ENSIPUG00000006080	ptcd2	86	51.205	Ictalurus_punctatus
ENSSFOG00015015415	ptcd2	84	47.531	ENSSTOG00000006596	PTCD2	85	47.531	Ictidomys_tridecemlineatus
ENSSFOG00015015415	ptcd2	94	46.575	ENSJJAG00000024388	Ptcd2	95	46.575	Jaculus_jaculus
ENSSFOG00015015415	ptcd2	89	51.312	ENSKMAG00000009329	ptcd2	89	51.312	Kryptolebias_marmoratus
ENSSFOG00015015415	ptcd2	100	54.427	ENSLBEG00000024871	ptcd2	98	54.427	Labrus_bergylta
ENSSFOG00015015415	ptcd2	98	56.117	ENSLOCG00000011122	ptcd2	98	56.117	Lepisosteus_oculatus
ENSSFOG00015015415	ptcd2	71	52.727	ENSLAFG00000004115	PTCD2	99	50.162	Loxodonta_africana
ENSSFOG00015015415	ptcd2	93	46.556	ENSMFAG00000031516	PTCD2	93	46.556	Macaca_fascicularis
ENSSFOG00015015415	ptcd2	93	46.556	ENSMNEG00000007537	PTCD2	94	46.556	Macaca_nemestrina
ENSSFOG00015015415	ptcd2	93	46.281	ENSMLEG00000031093	PTCD2	93	46.281	Mandrillus_leucophaeus
ENSSFOG00015015415	ptcd2	100	53.906	ENSMAMG00000018529	ptcd2	100	53.906	Mastacembelus_armatus
ENSSFOG00015015415	ptcd2	100	53.646	ENSMZEG00005003625	ptcd2	98	53.646	Maylandia_zebra
ENSSFOG00015015415	ptcd2	91	48.424	ENSMGAG00000005033	PTCD2	100	48.424	Meleagris_gallopavo
ENSSFOG00015015415	ptcd2	91	54.857	ENSMAUG00000020253	Ptcd2	90	37.249	Mesocricetus_auratus
ENSSFOG00015015415	ptcd2	93	46.389	ENSMICG00000004535	PTCD2	93	46.389	Microcebus_murinus
ENSSFOG00015015415	ptcd2	91	46.154	ENSMOCG00000019985	Ptcd2	92	46.154	Microtus_ochrogaster
ENSSFOG00015015415	ptcd2	91	47.025	ENSMODG00000001695	PTCD2	92	47.025	Monodelphis_domestica
ENSSFOG00015015415	ptcd2	100	53.906	ENSMALG00000022372	ptcd2	100	53.906	Monopterus_albus
ENSSFOG00015015415	ptcd2	91	44.286	MGP_CAROLIEiJ_G0018829	Ptcd2	92	44.286	Mus_caroli
ENSSFOG00015015415	ptcd2	91	44.571	ENSMUSG00000021650	Ptcd2	92	44.571	Mus_musculus
ENSSFOG00015015415	ptcd2	91	44.857	MGP_PahariEiJ_G0015904	Ptcd2	92	44.857	Mus_pahari
ENSSFOG00015015415	ptcd2	91	45.143	MGP_SPRETEiJ_G0019711	Ptcd2	92	45.143	Mus_spretus
ENSSFOG00015015415	ptcd2	89	47.826	ENSMPUG00000014401	PTCD2	90	47.826	Mustela_putorius_furo
ENSSFOG00015015415	ptcd2	83	48.125	ENSMLUG00000007374	PTCD2	85	47.879	Myotis_lucifugus
ENSSFOG00015015415	ptcd2	93	45.961	ENSNGAG00000005027	Ptcd2	93	45.961	Nannospalax_galili
ENSSFOG00015015415	ptcd2	86	53.636	ENSNBRG00000000092	-	100	53.636	Neolamprologus_brichardi
ENSSFOG00015015415	ptcd2	100	53.646	ENSNBRG00000008174	ptcd2	100	53.646	Neolamprologus_brichardi
ENSSFOG00015015415	ptcd2	93	45.152	ENSNLEG00000004516	PTCD2	93	45.152	Nomascus_leucogenys
ENSSFOG00015015415	ptcd2	91	47.429	ENSOPRG00000007290	PTCD2	90	47.429	Ochotona_princeps
ENSSFOG00015015415	ptcd2	92	48.596	ENSODEG00000016417	PTCD2	93	48.596	Octodon_degus
ENSSFOG00015015415	ptcd2	88	55.193	ENSONIG00000011269	ptcd2	97	55.193	Oreochromis_niloticus
ENSSFOG00015015415	ptcd2	92	45.531	ENSOCUG00000007970	PTCD2	93	45.531	Oryctolagus_cuniculus
ENSSFOG00015015415	ptcd2	90	53.757	ENSORLG00000003851	ptcd2	88	53.757	Oryzias_latipes
ENSSFOG00015015415	ptcd2	90	53.179	ENSORLG00020009823	ptcd2	90	53.179	Oryzias_latipes_hni
ENSSFOG00015015415	ptcd2	91	54.000	ENSORLG00015016777	ptcd2	99	54.000	Oryzias_latipes_hsok
ENSSFOG00015015415	ptcd2	95	53.425	ENSOMEG00000012396	ptcd2	88	53.425	Oryzias_melastigma
ENSSFOG00015015415	ptcd2	93	45.278	ENSOGAG00000008390	PTCD2	93	45.278	Otolemur_garnettii
ENSSFOG00015015415	ptcd2	84	48.607	ENSOARG00000005087	PTCD2	83	48.607	Ovis_aries
ENSSFOG00015015415	ptcd2	86	47.147	ENSPPAG00000028480	PTCD2	86	47.147	Pan_paniscus
ENSSFOG00015015415	ptcd2	86	46.847	ENSPTRG00000016968	PTCD2	86	46.847	Pan_troglodytes
ENSSFOG00015015415	ptcd2	90	46.264	ENSPANG00000006611	PTCD2	89	46.264	Papio_anubis
ENSSFOG00015015415	ptcd2	99	66.579	ENSPKIG00000019896	ptcd2	99	66.579	Paramormyrops_kingsleyae
ENSSFOG00015015415	ptcd2	81	55.769	ENSPSIG00000014559	PTCD2	97	55.769	Pelodiscus_sinensis
ENSSFOG00015015415	ptcd2	84	49.226	ENSPEMG00000000884	Ptcd2	84	49.226	Peromyscus_maniculatus_bairdii
ENSSFOG00015015415	ptcd2	91	46.742	ENSPCIG00000029047	PTCD2	92	46.742	Phascolarctos_cinereus
ENSSFOG00015015415	ptcd2	100	53.886	ENSPLAG00000010456	ptcd2	100	53.886	Poecilia_latipinna
ENSSFOG00015015415	ptcd2	100	54.663	ENSPREG00000021797	ptcd2	98	54.663	Poecilia_reticulata
ENSSFOG00015015415	ptcd2	93	40.443	ENSPPYG00000015543	PTCD2	92	40.443	Pongo_abelii
ENSSFOG00015015415	ptcd2	80	42.949	ENSPCAG00000006806	PTCD2	99	42.949	Procavia_capensis
ENSSFOG00015015415	ptcd2	87	46.866	ENSPVAG00000010935	PTCD2	87	46.866	Pteropus_vampyrus
ENSSFOG00015015415	ptcd2	100	53.385	ENSPNYG00000003122	ptcd2	98	53.385	Pundamilia_nyererei
ENSSFOG00015015415	ptcd2	98	54.354	ENSPNAG00000021490	ptcd2	98	54.354	Pygocentrus_nattereri
ENSSFOG00015015415	ptcd2	91	47.009	ENSRNOG00000028403	Ptcd2	92	47.009	Rattus_norvegicus
ENSSFOG00015015415	ptcd2	86	44.745	ENSRBIG00000032929	PTCD2	85	44.745	Rhinopithecus_bieti
ENSSFOG00015015415	ptcd2	93	46.832	ENSRROG00000000080	PTCD2	94	46.832	Rhinopithecus_roxellana
ENSSFOG00015015415	ptcd2	93	43.889	ENSSBOG00000018911	PTCD2	94	43.889	Saimiri_boliviensis_boliviensis
ENSSFOG00015015415	ptcd2	91	44.318	ENSSHAG00000003833	PTCD2	91	44.318	Sarcophilus_harrisii
ENSSFOG00015015415	ptcd2	90	50.720	ENSSMAG00000010350	ptcd2	90	50.720	Scophthalmus_maximus
ENSSFOG00015015415	ptcd2	100	52.727	ENSSDUG00000008142	ptcd2	95	52.727	Seriola_dumerili
ENSSFOG00015015415	ptcd2	100	52.604	ENSSLDG00000015284	ptcd2	100	52.604	Seriola_lalandi_dorsalis
ENSSFOG00015015415	ptcd2	51	52.821	ENSSARG00000004983	PTCD2	88	43.116	Sorex_araneus
ENSSFOG00015015415	ptcd2	92	47.042	ENSSPUG00000000176	PTCD2	89	47.042	Sphenodon_punctatus
ENSSFOG00015015415	ptcd2	100	51.302	ENSSPAG00000008591	ptcd2	98	51.302	Stegastes_partitus
ENSSFOG00015015415	ptcd2	86	47.289	ENSSSCG00000016975	PTCD2	78	47.289	Sus_scrofa
ENSSFOG00015015415	ptcd2	88	48.378	ENSTGUG00000005705	PTCD2	97	48.378	Taeniopygia_guttata
ENSSFOG00015015415	ptcd2	93	44.444	ENSTBEG00000016559	PTCD2	94	44.110	Tupaia_belangeri
ENSSFOG00015015415	ptcd2	84	48.607	ENSTTRG00000011851	PTCD2	83	48.607	Tursiops_truncatus
ENSSFOG00015015415	ptcd2	89	46.377	ENSUAMG00000007583	PTCD2	81	46.377	Ursus_americanus
ENSSFOG00015015415	ptcd2	84	47.678	ENSUMAG00000007666	PTCD2	84	47.678	Ursus_maritimus
ENSSFOG00015015415	ptcd2	93	43.575	ENSVPAG00000009597	PTCD2	92	43.575	Vicugna_pacos
ENSSFOG00015015415	ptcd2	84	50.464	ENSVVUG00000007299	-	97	42.938	Vulpes_vulpes
ENSSFOG00015015415	ptcd2	93	49.167	ENSXETG00000031652	PTCD2	94	49.167	Xenopus_tropicalis
ENSSFOG00015015415	ptcd2	100	53.906	ENSXMAG00000005940	ptcd2	91	53.906	Xiphophorus_maculatus