EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015440 (Gene tree)
Gene ID: -
Gene Symbol: zmat4b
Alias: si:dkey-159k22.3|zmat4
Full Name: zinc finger%2C matrin-type 4b
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 34396 bases
Position: chrKV410817.1:3610950-3645345
Accession: ZDB-GENE-091118-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024027	zf-met	PF12874.7	3.8e-14	1	2
ENSSFOP00015024027	zf-met	PF12874.7	3.8e-14	2	2
ENSSFOP00015024027	zf-C2H2_jaz	PF12171.8	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024287	-	369	-	ENSSFOP00015024027	122 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015015440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015440	zmat4b	91	67.257	ENSSFOG00015016149	zgc:171482	91	67.257
ENSSFOG00015015440	zmat4b	95	77.391	ENSSFOG00015013158	zmat4	68	77.391
ENSSFOG00015015440	zmat4b	91	66.964	ENSSFOG00015021238	zgc:171482	76	66.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015440	zmat4b	84	78.641	ENSG00000165061	ZMAT4	57	92.308	Homo_sapiens
ENSSFOG00015015440	zmat4b	95	45.872	ENSAPOG00000007448	zmat4a	69	53.571	Acanthochromis_polyacanthus
ENSSFOG00015015440	zmat4b	97	74.790	ENSACIG00000009080	zmat4a	72	74.790	Amphilophus_citrinellus
ENSSFOG00015015440	zmat4b	97	70.000	ENSAOCG00000004416	zmat4a	50	70.000	Amphiprion_ocellaris
ENSSFOG00015015440	zmat4b	97	70.000	ENSAPEG00000018565	zmat4a	50	70.000	Amphiprion_percula
ENSSFOG00015015440	zmat4b	84	84.466	ENSATEG00000012630	zmat4a	70	86.869	Anabas_testudineus
ENSSFOG00015015440	zmat4b	96	70.940	ENSAPLG00000006106	ZMAT4	51	70.940	Anas_platyrhynchos
ENSSFOG00015015440	zmat4b	95	74.138	ENSACAG00000005388	ZMAT4	56	74.138	Anolis_carolinensis
ENSSFOG00015015440	zmat4b	84	78.641	ENSANAG00000027926	ZMAT4	67	78.641	Aotus_nancymaae
ENSSFOG00015015440	zmat4b	97	67.692	ENSACLG00000005038	zmat4a	57	67.692	Astatotilapia_calliptera
ENSSFOG00015015440	zmat4b	89	82.243	ENSAMXG00000035337	zmat4a	71	82.243	Astyanax_mexicanus
ENSSFOG00015015440	zmat4b	84	78.641	ENSCCAG00000027437	ZMAT4	67	78.641	Cebus_capucinus
ENSSFOG00015015440	zmat4b	84	78.641	ENSCATG00000044978	ZMAT4	67	78.641	Cercocebus_atys
ENSSFOG00015015440	zmat4b	89	75.455	ENSCPBG00000002781	ZMAT4	64	80.000	Chrysemys_picta_bellii
ENSSFOG00015015440	zmat4b	84	78.641	ENSCGRG00000002696	Zmat4	71	81.250	Cricetulus_griseus_crigri
ENSSFOG00015015440	zmat4b	95	71.429	ENSCSEG00000013707	zmat4a	67	71.429	Cynoglossus_semilaevis
ENSSFOG00015015440	zmat4b	84	85.437	ENSCVAG00000000113	zmat4a	63	85.437	Cyprinodon_variegatus
ENSSFOG00015015440	zmat4b	91	79.279	ENSDARG00000061419	zmat4b	57	79.279	Danio_rerio
ENSSFOG00015015440	zmat4b	93	78.261	ENSDARG00000092987	zmat4a	71	83.962	Danio_rerio
ENSSFOG00015015440	zmat4b	88	83.962	ENSELUG00000005097	zmat4a	61	83.962	Esox_lucius
ENSSFOG00015015440	zmat4b	84	78.641	ENSFCAG00000012775	ZMAT4	67	78.641	Felis_catus
ENSSFOG00015015440	zmat4b	97	70.339	ENSFALG00000006455	ZMAT4	52	70.339	Ficedula_albicollis
ENSSFOG00015015440	zmat4b	84	84.466	ENSFHEG00000022872	zmat4b	74	84.466	Fundulus_heteroclitus
ENSSFOG00015015440	zmat4b	97	69.231	ENSGMOG00000007950	zmat4a	74	69.231	Gadus_morhua
ENSSFOG00015015440	zmat4b	95	70.690	ENSGALG00000003470	ZMAT4	51	70.690	Gallus_gallus
ENSSFOG00015015440	zmat4b	95	75.862	ENSGAFG00000013149	zmat4a	55	75.862	Gambusia_affinis
ENSSFOG00015015440	zmat4b	81	86.869	ENSGACG00000005515	zmat4a	65	86.869	Gasterosteus_aculeatus
ENSSFOG00015015440	zmat4b	95	72.650	ENSGAGG00000004799	ZMAT4	75	77.670	Gopherus_agassizii
ENSSFOG00015015440	zmat4b	84	78.641	ENSGGOG00000006633	ZMAT4	67	78.641	Gorilla_gorilla
ENSSFOG00015015440	zmat4b	97	68.462	ENSHBUG00000012634	zmat4a	50	68.462	Haplochromis_burtoni
ENSSFOG00015015440	zmat4b	96	71.795	ENSHGLG00000003246	ZMAT4	51	71.795	Heterocephalus_glaber_female
ENSSFOG00015015440	zmat4b	72	68.182	ENSHGLG00100000081	ZMAT4	56	68.182	Heterocephalus_glaber_male
ENSSFOG00015015440	zmat4b	81	85.859	ENSHCOG00000006516	zmat4b	79	85.859	Hippocampus_comes
ENSSFOG00015015440	zmat4b	87	76.415	ENSLACG00000006206	-	72	76.415	Latimeria_chalumnae
ENSSFOG00015015440	zmat4b	84	78.641	ENSMFAG00000043475	ZMAT4	67	78.641	Macaca_fascicularis
ENSSFOG00015015440	zmat4b	84	78.641	ENSMNEG00000042102	ZMAT4	67	78.641	Macaca_nemestrina
ENSSFOG00015015440	zmat4b	84	78.641	ENSMLEG00000034448	ZMAT4	67	78.641	Mandrillus_leucophaeus
ENSSFOG00015015440	zmat4b	84	84.466	ENSMAMG00000019914	zmat4a	66	86.869	Mastacembelus_armatus
ENSSFOG00015015440	zmat4b	97	68.462	ENSMZEG00005004946	zmat4a	50	68.462	Maylandia_zebra
ENSSFOG00015015440	zmat4b	90	80.180	ENSMMOG00000012619	zmat4a	82	80.180	Mola_mola
ENSSFOG00015015440	zmat4b	96	69.767	ENSMALG00000015056	zmat4a	50	69.767	Monopterus_albus
ENSSFOG00015015440	zmat4b	97	68.504	MGP_CAROLIEiJ_G0030909	Zmat4	95	76.923	Mus_caroli
ENSSFOG00015015440	zmat4b	97	68.504	ENSMUSG00000037492	Zmat4	95	76.923	Mus_musculus
ENSSFOG00015015440	zmat4b	97	68.504	MGP_PahariEiJ_G0021380	Zmat4	95	76.923	Mus_pahari
ENSSFOG00015015440	zmat4b	97	68.504	MGP_SPRETEiJ_G0032028	Zmat4	95	76.923	Mus_spretus
ENSSFOG00015015440	zmat4b	96	75.424	ENSNBRG00000011844	zmat4a	73	75.424	Neolamprologus_brichardi
ENSSFOG00015015440	zmat4b	84	78.641	ENSNLEG00000012564	ZMAT4	67	78.641	Nomascus_leucogenys
ENSSFOG00015015440	zmat4b	94	69.737	ENSONIG00000016086	zmat4a	68	69.737	Oreochromis_niloticus
ENSSFOG00015015440	zmat4b	84	78.641	ENSOANG00000022431	ZMAT4	75	78.641	Ornithorhynchus_anatinus
ENSSFOG00015015440	zmat4b	94	78.448	ENSORLG00000016169	zmat4b	79	78.448	Oryzias_latipes
ENSSFOG00015015440	zmat4b	89	81.818	ENSOMEG00000003441	zmat4a	56	74.400	Oryzias_melastigma
ENSSFOG00015015440	zmat4b	84	79.612	ENSPPRG00000007023	ZMAT4	67	79.612	Panthera_pardus
ENSSFOG00015015440	zmat4b	84	79.612	ENSPTIG00000019738	ZMAT4	67	79.612	Panthera_tigris_altaica
ENSSFOG00015015440	zmat4b	84	78.641	ENSPTRG00000020191	ZMAT4	67	78.641	Pan_troglodytes
ENSSFOG00015015440	zmat4b	84	78.641	ENSPANG00000014196	ZMAT4	67	78.641	Papio_anubis
ENSSFOG00015015440	zmat4b	84	88.350	ENSPKIG00000021792	zmat4b	68	88.350	Paramormyrops_kingsleyae
ENSSFOG00015015440	zmat4b	95	72.650	ENSPSIG00000004847	ZMAT4	51	72.650	Pelodiscus_sinensis
ENSSFOG00015015440	zmat4b	81	85.149	ENSPMGG00000001436	zmat4b	51	85.149	Periophthalmus_magnuspinnatus
ENSSFOG00015015440	zmat4b	88	57.798	ENSPMAG00000004582	zmat4a	77	57.798	Petromyzon_marinus
ENSSFOG00015015440	zmat4b	82	81.000	ENSPCIG00000028706	ZMAT4	60	81.000	Phascolarctos_cinereus
ENSSFOG00015015440	zmat4b	97	68.504	ENSPCAG00000004820	ZMAT4	55	68.504	Procavia_capensis
ENSSFOG00015015440	zmat4b	84	78.641	ENSPCOG00000007717	ZMAT4	67	78.641	Propithecus_coquereli
ENSSFOG00015015440	zmat4b	84	78.641	ENSRBIG00000031887	ZMAT4	67	78.641	Rhinopithecus_bieti
ENSSFOG00015015440	zmat4b	84	78.641	ENSRROG00000040877	ZMAT4	67	78.641	Rhinopithecus_roxellana
ENSSFOG00015015440	zmat4b	84	78.641	ENSSBOG00000017391	ZMAT4	67	78.641	Saimiri_boliviensis_boliviensis
ENSSFOG00015015440	zmat4b	95	76.724	ENSSMAG00000017693	zmat4a	74	76.724	Scophthalmus_maximus
ENSSFOG00015015440	zmat4b	84	84.466	ENSSDUG00000005878	zmat4a	55	70.000	Seriola_dumerili
ENSSFOG00015015440	zmat4b	97	70.000	ENSSLDG00000012934	zmat4a	50	70.000	Seriola_lalandi_dorsalis
ENSSFOG00015015440	zmat4b	97	70.543	ENSTRUG00000005170	zmat4a	55	70.543	Takifugu_rubripes
ENSSFOG00015015440	zmat4b	85	85.000	ENSTNIG00000018863	zmat4b	73	85.000	Tetraodon_nigroviridis
ENSSFOG00015015440	zmat4b	96	71.795	ENSTTRG00000009606	ZMAT4	51	71.795	Tursiops_truncatus
ENSSFOG00015015440	zmat4b	81	60.577	ENSXCOG00000015061	zmat4b	72	60.577	Xiphophorus_couchianus