EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015015462 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 12986 bases
Position: chrKV410958.1:389206-402191
Accession: 108931681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024099	HRDC	PF00570.23	1.2e-13	1	1
ENSSFOP00015024099	BDHCT	PF08072.11	4.1e-15	1	1
ENSSFOP00015024099	DEAD	PF00270.29	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024360	-	3687	XM_018747640	ENSSFOP00015024099	1228 (aa)	XP_018603156	-

Gene Model

Click here to download ENSSFOG00015015462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015462	blm	63	65.128	ENSG00000197299	BLM	71	55.533	Homo_sapiens
ENSSFOG00015015462	blm	74	72.524	ENSAPOG00000017966	blm	68	72.535	Acanthochromis_polyacanthus
ENSSFOG00015015462	blm	63	65.051	ENSAMEG00000013843	BLM	55	65.051	Ailuropoda_melanoleuca
ENSSFOG00015015462	blm	91	63.016	ENSACIG00000023762	blm	74	64.169	Amphilophus_citrinellus
ENSSFOG00015015462	blm	74	71.849	ENSAOCG00000003318	blm	66	72.150	Amphiprion_ocellaris
ENSSFOG00015015462	blm	74	71.731	ENSAPEG00000018105	blm	65	71.981	Amphiprion_percula
ENSSFOG00015015462	blm	87	74.548	ENSATEG00000006421	blm	67	73.396	Anabas_testudineus
ENSSFOG00015015462	blm	72	59.480	ENSAPLG00000006878	BLM	71	61.137	Anas_platyrhynchos
ENSSFOG00015015462	blm	65	65.255	ENSACAG00000014275	BLM	56	65.255	Anolis_carolinensis
ENSSFOG00015015462	blm	67	62.410	ENSANAG00000038415	BLM	54	68.727	Aotus_nancymaae
ENSSFOG00015015462	blm	86	71.649	ENSACLG00000020354	blm	66	71.915	Astatotilapia_calliptera
ENSSFOG00015015462	blm	76	70.187	ENSAMXG00000016970	blm	67	70.692	Astyanax_mexicanus
ENSSFOG00015015462	blm	58	72.143	ENSBTAG00000020301	BLM	54	72.143	Bos_taurus
ENSSFOG00015015462	blm	55	40.358	WBGene00001865	him-6	70	40.358	Caenorhabditis_elegans
ENSSFOG00015015462	blm	63	64.549	ENSCJAG00000009803	BLM	50	73.347	Callithrix_jacchus
ENSSFOG00015015462	blm	63	64.594	ENSCAFG00000012385	BLM	55	64.841	Canis_familiaris
ENSSFOG00015015462	blm	63	64.594	ENSCAFG00020016111	BLM	86	68.303	Canis_lupus_dingo
ENSSFOG00015015462	blm	58	72.143	ENSCHIG00000010329	BLM	54	72.143	Capra_hircus
ENSSFOG00015015462	blm	63	64.496	ENSTSYG00000012368	BLM	50	73.347	Carlito_syrichta
ENSSFOG00015015462	blm	64	63.138	ENSCPOG00000001761	BLM	55	63.138	Cavia_porcellus
ENSSFOG00015015462	blm	67	62.048	ENSCCAG00000023069	BLM	55	68.727	Cebus_capucinus
ENSSFOG00015015462	blm	63	65.045	ENSCATG00000040609	BLM	75	77.741	Cercocebus_atys
ENSSFOG00015015462	blm	67	61.275	ENSCLAG00000012111	BLM	59	61.629	Chinchilla_lanigera
ENSSFOG00015015462	blm	63	64.872	ENSCSAG00000017040	BLM	54	65.223	Chlorocebus_sabaeus
ENSSFOG00015015462	blm	56	62.736	ENSCHOG00000006255	BLM	50	62.736	Choloepus_hoffmanni
ENSSFOG00015015462	blm	71	60.706	ENSCPBG00000025000	BLM	71	67.075	Chrysemys_picta_bellii
ENSSFOG00015015462	blm	63	64.796	ENSCGRG00001024897	Blm	55	65.063	Cricetulus_griseus_chok1gshd
ENSSFOG00015015462	blm	76	71.260	ENSCSEG00000013483	blm	71	71.630	Cynoglossus_semilaevis
ENSSFOG00015015462	blm	62	70.339	ENSCVAG00000017583	blm	97	54.680	Cyprinodon_variegatus
ENSSFOG00015015462	blm	71	76.923	ENSDARG00000077089	blm	63	76.923	Danio_rerio
ENSSFOG00015015462	blm	64	64.450	ENSDNOG00000010159	BLM	54	64.758	Dasypus_novemcinctus
ENSSFOG00015015462	blm	67	61.164	ENSDORG00000011033	Blm	81	61.538	Dipodomys_ordii
ENSSFOG00015015462	blm	67	59.237	ENSEASG00005006727	BLM	58	59.382	Equus_asinus_asinus
ENSSFOG00015015462	blm	67	62.500	ENSECAG00000011405	BLM	58	62.663	Equus_caballus
ENSSFOG00015015462	blm	64	63.405	ENSEEUG00000001434	BLM	56	63.405	Erinaceus_europaeus
ENSSFOG00015015462	blm	88	72.418	ENSELUG00000019098	blm	61	72.229	Esox_lucius
ENSSFOG00015015462	blm	63	64.322	ENSFCAG00000006087	BLM	50	73.554	Felis_catus
ENSSFOG00015015462	blm	70	60.460	ENSFALG00000010981	BLM	63	64.475	Ficedula_albicollis
ENSSFOG00015015462	blm	65	62.500	ENSFDAG00000012658	BLM	60	62.500	Fukomys_damarensis
ENSSFOG00015015462	blm	80	61.589	ENSFHEG00000002553	blm	76	63.198	Fundulus_heteroclitus
ENSSFOG00015015462	blm	88	70.074	ENSGMOG00000016431	blm	90	68.836	Gadus_morhua
ENSSFOG00015015462	blm	72	59.296	ENSGALG00000008256	BLM	60	61.882	Gallus_gallus
ENSSFOG00015015462	blm	68	71.412	ENSGAFG00000001117	blm	80	63.567	Gambusia_affinis
ENSSFOG00015015462	blm	77	69.448	ENSGACG00000010863	blm	100	82.008	Gasterosteus_aculeatus
ENSSFOG00015015462	blm	61	62.987	ENSGAGG00000005383	BLM	68	71.840	Gopherus_agassizii
ENSSFOG00015015462	blm	63	65.256	ENSGGOG00000007710	BLM	75	76.898	Gorilla_gorilla
ENSSFOG00015015462	blm	86	71.530	ENSHBUG00000015943	blm	67	71.798	Haplochromis_burtoni
ENSSFOG00015015462	blm	67	60.166	ENSHGLG00000013231	BLM	58	60.693	Heterocephalus_glaber_female
ENSSFOG00015015462	blm	79	63.755	ENSHCOG00000011455	blm	100	63.956	Hippocampus_comes
ENSSFOG00015015462	blm	95	59.464	ENSIPUG00000000529	blm	87	66.634	Ictalurus_punctatus
ENSSFOG00015015462	blm	67	60.631	ENSSTOG00000005000	BLM	58	60.819	Ictidomys_tridecemlineatus
ENSSFOG00015015462	blm	63	59.079	ENSJJAG00000016322	Blm	73	58.696	Jaculus_jaculus
ENSSFOG00015015462	blm	79	62.868	ENSKMAG00000016608	blm	65	72.033	Kryptolebias_marmoratus
ENSSFOG00015015462	blm	55	78.917	ENSLBEG00000018729	blm	91	73.514	Labrus_bergylta
ENSSFOG00015015462	blm	68	64.781	ENSLACG00000006490	BLM	59	64.781	Latimeria_chalumnae
ENSSFOG00015015462	blm	82	70.813	ENSLOCG00000014302	blm	70	70.729	Lepisosteus_oculatus
ENSSFOG00015015462	blm	63	65.173	ENSMFAG00000042982	BLM	75	77.741	Macaca_fascicularis
ENSSFOG00015015462	blm	63	65.045	ENSMMUG00000019526	BLM	75	77.741	Macaca_mulatta
ENSSFOG00015015462	blm	63	64.917	ENSMNEG00000031251	BLM	75	77.409	Macaca_nemestrina
ENSSFOG00015015462	blm	63	61.410	ENSMLEG00000032934	BLM	54	61.607	Mandrillus_leucophaeus
ENSSFOG00015015462	blm	72	74.024	ENSMAMG00000008726	blm	66	72.813	Mastacembelus_armatus
ENSSFOG00015015462	blm	94	71.767	ENSMZEG00005022323	blm	89	72.373	Maylandia_zebra
ENSSFOG00015015462	blm	66	61.621	ENSMAUG00000008953	Blm	58	61.695	Mesocricetus_auratus
ENSSFOG00015015462	blm	63	63.949	ENSMICG00000034442	BLM	50	72.521	Microcebus_murinus
ENSSFOG00015015462	blm	68	61.831	ENSMOCG00000016367	Blm	59	62.188	Microtus_ochrogaster
ENSSFOG00015015462	blm	72	71.311	ENSMMOG00000006959	blm	65	71.228	Mola_mola
ENSSFOG00015015462	blm	64	64.885	ENSMODG00000019449	BLM	54	64.885	Monodelphis_domestica
ENSSFOG00015015462	blm	73	73.239	ENSMALG00000007323	blm	68	73.248	Monopterus_albus
ENSSFOG00015015462	blm	64	64.668	MGP_CAROLIEiJ_G0029907	Blm	54	64.668	Mus_caroli
ENSSFOG00015015462	blm	63	64.368	ENSMUSG00000030528	Blm	54	64.623	Mus_musculus
ENSSFOG00015015462	blm	63	64.322	MGP_PahariEiJ_G0013129	Blm	54	65.350	Mus_pahari
ENSSFOG00015015462	blm	63	64.841	MGP_SPRETEiJ_G0031009	Blm	54	65.096	Mus_spretus
ENSSFOG00015015462	blm	64	65.223	ENSMLUG00000014697	BLM	55	65.223	Myotis_lucifugus
ENSSFOG00015015462	blm	67	59.977	ENSNGAG00000001275	Blm	59	60.545	Nannospalax_galili
ENSSFOG00015015462	blm	91	71.530	ENSNBRG00000019702	blm	89	72.137	Neolamprologus_brichardi
ENSSFOG00015015462	blm	63	62.740	ENSNLEG00000012087	BLM	99	50.760	Nomascus_leucogenys
ENSSFOG00015015462	blm	62	60.807	ENSMEUG00000007253	BLM	54	60.807	Notamacropus_eugenii
ENSSFOG00015015462	blm	59	64.666	ENSOPRG00000011667	BLM	51	64.666	Ochotona_princeps
ENSSFOG00015015462	blm	63	59.415	ENSODEG00000015373	BLM	75	59.772	Octodon_degus
ENSSFOG00015015462	blm	82	69.686	ENSONIG00000015193	blm	63	69.725	Oreochromis_niloticus
ENSSFOG00015015462	blm	62	65.469	ENSOANG00000009316	-	100	65.340	Ornithorhynchus_anatinus
ENSSFOG00015015462	blm	67	60.689	ENSOCUG00000013969	BLM	58	60.689	Oryctolagus_cuniculus
ENSSFOG00015015462	blm	75	73.703	ENSORLG00000008110	blm	66	73.703	Oryzias_latipes
ENSSFOG00015015462	blm	74	73.703	ENSORLG00020004812	blm	66	73.703	Oryzias_latipes_hni
ENSSFOG00015015462	blm	75	73.467	ENSORLG00015018640	blm	99	66.568	Oryzias_latipes_hsok
ENSSFOG00015015462	blm	76	73.294	ENSOMEG00000023545	blm	68	73.616	Oryzias_melastigma
ENSSFOG00015015462	blm	67	61.124	ENSOGAG00000005708	BLM	59	61.124	Otolemur_garnettii
ENSSFOG00015015462	blm	66	62.291	ENSOARG00000012875	BLM	58	62.500	Ovis_aries
ENSSFOG00015015462	blm	63	65.000	ENSPPAG00000032173	BLM	74	53.548	Pan_paniscus
ENSSFOG00015015462	blm	63	64.322	ENSPPRG00000002471	BLM	50	73.499	Panthera_pardus
ENSSFOG00015015462	blm	63	63.811	ENSPTIG00000016168	BLM	50	73.045	Panthera_tigris_altaica
ENSSFOG00015015462	blm	63	64.872	ENSPTRG00000007460	BLM	50	73.554	Pan_troglodytes
ENSSFOG00015015462	blm	63	64.917	ENSPANG00000018572	BLM	75	77.741	Papio_anubis
ENSSFOG00015015462	blm	87	75.976	ENSPKIG00000008954	blm	81	71.593	Paramormyrops_kingsleyae
ENSSFOG00015015462	blm	74	62.566	ENSPMGG00000006629	blm	99	62.698	Periophthalmus_magnuspinnatus
ENSSFOG00015015462	blm	66	62.530	ENSPEMG00000017348	Blm	58	62.840	Peromyscus_maniculatus_bairdii
ENSSFOG00015015462	blm	53	62.883	ENSPMAG00000000445	blm	88	63.037	Petromyzon_marinus
ENSSFOG00015015462	blm	64	63.955	ENSPCIG00000006609	BLM	53	64.512	Phascolarctos_cinereus
ENSSFOG00015015462	blm	80	62.702	ENSPFOG00000005059	blm	76	63.749	Poecilia_formosa
ENSSFOG00015015462	blm	80	63.083	ENSPLAG00000017344	blm	76	64.129	Poecilia_latipinna
ENSSFOG00015015462	blm	80	62.892	ENSPMEG00000000321	blm	76	63.939	Poecilia_mexicana
ENSSFOG00015015462	blm	80	62.488	ENSPREG00000007715	blm	76	63.153	Poecilia_reticulata
ENSSFOG00015015462	blm	63	64.103	ENSPPYG00000006784	BLM	75	52.646	Pongo_abelii
ENSSFOG00015015462	blm	67	60.000	ENSPCAG00000008960	BLM	57	60.949	Procavia_capensis
ENSSFOG00015015462	blm	63	55.371	ENSPCOG00000000439	BLM	52	55.371	Propithecus_coquereli
ENSSFOG00015015462	blm	58	76.744	ENSPVAG00000011642	BLM	50	76.744	Pteropus_vampyrus
ENSSFOG00015015462	blm	79	70.087	ENSPNYG00000010956	blm	59	70.261	Pundamilia_nyererei
ENSSFOG00015015462	blm	76	71.778	ENSPNAG00000011714	blm	67	71.969	Pygocentrus_nattereri
ENSSFOG00015015462	blm	63	63.949	ENSRNOG00000011213	Blm	55	63.949	Rattus_norvegicus
ENSSFOG00015015462	blm	63	64.496	ENSRBIG00000029656	BLM	75	77.409	Rhinopithecus_bieti
ENSSFOG00015015462	blm	63	64.496	ENSRROG00000037871	BLM	75	77.409	Rhinopithecus_roxellana
ENSSFOG00015015462	blm	57	67.890	ENSSBOG00000030957	BLM	54	67.890	Saimiri_boliviensis_boliviensis
ENSSFOG00015015462	blm	79	52.869	ENSSHAG00000007988	BLM	59	62.143	Sarcophilus_harrisii
ENSSFOG00015015462	blm	72	71.731	ENSSMAG00000001120	blm	64	71.981	Scophthalmus_maximus
ENSSFOG00015015462	blm	74	71.934	ENSSDUG00000010955	blm	66	72.248	Seriola_dumerili
ENSSFOG00015015462	blm	71	71.598	ENSSLDG00000000634	blm	64	71.915	Seriola_lalandi_dorsalis
ENSSFOG00015015462	blm	64	59.148	ENSSARG00000006398	BLM	59	59.772	Sorex_araneus
ENSSFOG00015015462	blm	79	53.561	ENSSPUG00000000013	BLM	75	59.328	Sphenodon_punctatus
ENSSFOG00015015462	blm	72	72.899	ENSSPAG00000013999	blm	86	73.318	Stegastes_partitus
ENSSFOG00015015462	blm	63	64.841	ENSSSCG00000001816	BLM	51	68.392	Sus_scrofa
ENSSFOG00015015462	blm	71	52.328	ENSTGUG00000009959	-	69	56.500	Taeniopygia_guttata
ENSSFOG00015015462	blm	72	69.357	ENSTRUG00000019860	blm	64	69.953	Takifugu_rubripes
ENSSFOG00015015462	blm	90	62.188	ENSTNIG00000019246	blm	76	62.572	Tetraodon_nigroviridis
ENSSFOG00015015462	blm	63	65.096	ENSTTRG00000016386	BLM	55	65.267	Tursiops_truncatus
ENSSFOG00015015462	blm	63	65.051	ENSUMAG00000009105	BLM	94	68.399	Ursus_maritimus
ENSSFOG00015015462	blm	64	61.372	ENSVPAG00000000085	BLM	55	61.245	Vicugna_pacos
ENSSFOG00015015462	blm	55	78.904	ENSVVUG00000006402	BLM	51	78.904	Vulpes_vulpes
ENSSFOG00015015462	blm	70	62.844	ENSXETG00000007847	blm	55	67.257	Xenopus_tropicalis
ENSSFOG00015015462	blm	80	58.818	ENSXCOG00000020227	blm	74	59.643	Xiphophorus_couchianus
ENSSFOG00015015462	blm	80	61.640	ENSXMAG00000002951	blm	76	61.900	Xiphophorus_maculatus