EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015563 (Gene tree)
Gene ID: 108923703
Gene Symbol: rbm4.3
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6213 bases
Position: chrKV410829.1:4076049-4082261
Accession: 108923703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024201	RRM_5	PF13893.6	2.4e-12	1	2
ENSSFOP00015024201	RRM_5	PF13893.6	2.4e-12	2	2
ENSSFOP00015024201	RRM_1	PF00076.22	2e-28	1	2
ENSSFOP00015024201	RRM_1	PF00076.22	2e-28	2	2
ENSSFOP00015024224	RRM_1	PF00076.22	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024487	-	999	-	ENSSFOP00015024224	332 (aa)	-	-
ENSSFOT00015024462	-	2989	XM_018734639	ENSSFOP00015024201	361 (aa)	XP_018590155	A0A1W4YNZ6

Gene Model

Click here to download ENSSFOG00015015563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015563	rbm4.3	80	58.278	ENSSFOG00015021996	sf1	99	36.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015563	rbm4.3	97	62.393	ENSAPOG00000002991	rbm4.3	98	62.921	Acanthochromis_polyacanthus
ENSSFOG00015015563	rbm4.3	100	68.508	ENSAPOG00000002953	rbm4.3	100	69.061	Acanthochromis_polyacanthus
ENSSFOG00015015563	rbm4.3	97	62.963	ENSACIG00000021295	rbm4.3	98	62.953	Amphilophus_citrinellus
ENSSFOG00015015563	rbm4.3	100	63.536	ENSACIG00000021311	-	100	64.917	Amphilophus_citrinellus
ENSSFOG00015015563	rbm4.3	100	68.698	ENSAOCG00000008015	rbm4.3	100	68.698	Amphiprion_ocellaris
ENSSFOG00015015563	rbm4.3	97	61.582	ENSAOCG00000007992	rbm4.3	98	63.202	Amphiprion_ocellaris
ENSSFOG00015015563	rbm4.3	97	61.864	ENSAPEG00000017288	rbm4.3	98	63.483	Amphiprion_percula
ENSSFOG00015015563	rbm4.3	100	68.975	ENSAPEG00000017324	rbm4.3	100	68.975	Amphiprion_percula
ENSSFOG00015015563	rbm4.3	100	67.867	ENSATEG00000019375	rbm4.3	100	67.867	Anabas_testudineus
ENSSFOG00015015563	rbm4.3	97	57.670	ENSATEG00000019395	rbm4.3	99	57.766	Anabas_testudineus
ENSSFOG00015015563	rbm4.3	100	64.365	ENSACLG00000010620	-	100	64.641	Astatotilapia_calliptera
ENSSFOG00015015563	rbm4.3	97	62.963	ENSACLG00000010642	rbm4.3	97	62.953	Astatotilapia_calliptera
ENSSFOG00015015563	rbm4.3	53	77.487	ENSAMXG00000040224	rbm4.3	78	77.487	Astyanax_mexicanus
ENSSFOG00015015563	rbm4.3	100	63.812	ENSCSEG00000013659	rbm4.3	100	64.917	Cynoglossus_semilaevis
ENSSFOG00015015563	rbm4.3	100	62.331	ENSCVAG00000008508	rbm4.3	100	63.388	Cyprinodon_variegatus
ENSSFOG00015015563	rbm4.3	96	65.318	ENSDARG00000022129	rbm4.3	99	67.590	Danio_rerio
ENSSFOG00015015563	rbm4.3	100	63.043	ENSELUG00000022168	rbm4.3	100	64.850	Esox_lucius
ENSSFOG00015015563	rbm4.3	99	64.917	ENSELUG00000022155	rbm4.3	99	66.851	Esox_lucius
ENSSFOG00015015563	rbm4.3	99	65.110	ENSELUG00000022150	rbm4.3	99	65.014	Esox_lucius
ENSSFOG00015015563	rbm4.3	79	57.143	ENSFHEG00000023096	rbm4.3	99	57.650	Fundulus_heteroclitus
ENSSFOG00015015563	rbm4.3	81	65.411	ENSFHEG00000023137	rbm4.3	87	65.411	Fundulus_heteroclitus
ENSSFOG00015015563	rbm4.3	52	66.667	ENSGMOG00000004032	rbm4.3	55	68.293	Gadus_morhua
ENSSFOG00015015563	rbm4.3	100	58.356	ENSGAFG00000001935	rbm4.3	100	58.856	Gambusia_affinis
ENSSFOG00015015563	rbm4.3	89	71.508	ENSGACG00000019980	rbm4.3	99	59.016	Gasterosteus_aculeatus
ENSSFOG00015015563	rbm4.3	97	63.533	ENSHBUG00000009051	rbm4.3	97	63.510	Haplochromis_burtoni
ENSSFOG00015015563	rbm4.3	100	64.365	ENSHBUG00000009020	-	100	64.641	Haplochromis_burtoni
ENSSFOG00015015563	rbm4.3	96	63.506	ENSHCOG00000010349	rbm4.3	100	63.760	Hippocampus_comes
ENSSFOG00015015563	rbm4.3	69	52.381	ENSHCOG00000010363	rbm4.3	98	54.372	Hippocampus_comes
ENSSFOG00015015563	rbm4.3	100	68.785	ENSIPUG00000022943	RBM4B	100	68.785	Ictalurus_punctatus
ENSSFOG00015015563	rbm4.3	100	62.192	ENSKMAG00000017468	rbm4.3	100	61.918	Kryptolebias_marmoratus
ENSSFOG00015015563	rbm4.3	100	66.851	ENSLBEG00000001071	-	100	67.403	Labrus_bergylta
ENSSFOG00015015563	rbm4.3	55	63.184	ENSLBEG00000001025	rbm4.3	86	63.184	Labrus_bergylta
ENSSFOG00015015563	rbm4.3	96	64.865	ENSLOCG00000002755	rbm4.3	100	64.858	Lepisosteus_oculatus
ENSSFOG00015015563	rbm4.3	97	58.120	ENSMAMG00000004701	rbm4.3	99	59.945	Mastacembelus_armatus
ENSSFOG00015015563	rbm4.3	100	68.144	ENSMAMG00000004715	-	84	68.144	Mastacembelus_armatus
ENSSFOG00015015563	rbm4.3	85	61.364	ENSMZEG00005028537	-	84	61.146	Maylandia_zebra
ENSSFOG00015015563	rbm4.3	86	62.460	ENSMZEG00005007441	rbm4.3	79	61.859	Maylandia_zebra
ENSSFOG00015015563	rbm4.3	100	61.602	ENSMZEG00005007417	-	100	61.878	Maylandia_zebra
ENSSFOG00015015563	rbm4.3	97	62.963	ENSMZEG00005028540	rbm4.3	97	62.953	Maylandia_zebra
ENSSFOG00015015563	rbm4.3	97	58.708	ENSMMOG00000012191	rbm4.3	99	58.266	Mola_mola
ENSSFOG00015015563	rbm4.3	90	64.602	ENSMALG00000003001	rbm4.3	96	64.602	Monopterus_albus
ENSSFOG00015015563	rbm4.3	97	58.000	ENSMALG00000015014	-	98	58.427	Monopterus_albus
ENSSFOG00015015563	rbm4.3	93	57.313	ENSMALG00000003032	rbm4.3	98	57.396	Monopterus_albus
ENSSFOG00015015563	rbm4.3	97	63.818	ENSNBRG00000012372	rbm4.3	97	63.788	Neolamprologus_brichardi
ENSSFOG00015015563	rbm4.3	100	64.365	ENSONIG00000018380	-	100	64.641	Oreochromis_niloticus
ENSSFOG00015015563	rbm4.3	97	63.352	ENSONIG00000018378	rbm4.3	97	63.333	Oreochromis_niloticus
ENSSFOG00015015563	rbm4.3	100	57.682	ENSORLG00000012473	rbm4.3	100	59.838	Oryzias_latipes
ENSSFOG00015015563	rbm4.3	97	54.749	ENSORLG00000024749	rbm4.3	97	54.420	Oryzias_latipes
ENSSFOG00015015563	rbm4.3	100	59.299	ENSORLG00000011589	rbm4.3	100	61.995	Oryzias_latipes
ENSSFOG00015015563	rbm4.3	100	59.569	ENSORLG00020012474	rbm4.3	100	62.264	Oryzias_latipes_hni
ENSSFOG00015015563	rbm4.3	99	54.768	ENSORLG00020012482	rbm4.3	99	54.645	Oryzias_latipes_hni
ENSSFOG00015015563	rbm4.3	100	57.682	ENSORLG00020012464	rbm4.3	100	59.838	Oryzias_latipes_hni
ENSSFOG00015015563	rbm4.3	100	58.221	ENSORLG00015013686	rbm4.3	100	60.377	Oryzias_latipes_hsok
ENSSFOG00015015563	rbm4.3	97	55.866	ENSORLG00015013721	rbm4.3	99	55.313	Oryzias_latipes_hsok
ENSSFOG00015015563	rbm4.3	100	59.569	ENSORLG00015013698	rbm4.3	100	62.534	Oryzias_latipes_hsok
ENSSFOG00015015563	rbm4.3	97	55.114	ENSOMEG00000005950	rbm4.3	98	57.618	Oryzias_melastigma
ENSSFOG00015015563	rbm4.3	100	59.189	ENSOMEG00000005918	rbm4.3	100	60.541	Oryzias_melastigma
ENSSFOG00015015563	rbm4.3	100	59.409	ENSOMEG00000005929	rbm4.3	100	61.022	Oryzias_melastigma
ENSSFOG00015015563	rbm4.3	94	73.900	ENSPKIG00000007001	rbm4.3	100	73.684	Paramormyrops_kingsleyae
ENSSFOG00015015563	rbm4.3	99	58.791	ENSPLAG00000006077	rbm4.3	99	59.079	Poecilia_latipinna
ENSSFOG00015015563	rbm4.3	100	62.568	ENSPLAG00000006131	rbm4.3	100	63.661	Poecilia_latipinna
ENSSFOG00015015563	rbm4.3	99	58.678	ENSPMEG00000024260	rbm4.3	99	59.239	Poecilia_mexicana
ENSSFOG00015015563	rbm4.3	100	61.749	ENSPMEG00000024263	rbm4.3	100	63.388	Poecilia_mexicana
ENSSFOG00015015563	rbm4.3	100	61.749	ENSPMEG00000024271	rbm4.3	100	62.842	Poecilia_mexicana
ENSSFOG00015015563	rbm4.3	99	59.178	ENSPREG00000002093	-	99	59.401	Poecilia_reticulata
ENSSFOG00015015563	rbm4.3	100	59.392	ENSPREG00000002156	rbm4.3	100	59.563	Poecilia_reticulata
ENSSFOG00015015563	rbm4.3	97	62.678	ENSPNYG00000018564	rbm4.3	97	62.674	Pundamilia_nyererei
ENSSFOG00015015563	rbm4.3	100	64.365	ENSPNYG00000018541	rbm4.3	100	64.641	Pundamilia_nyererei
ENSSFOG00015015563	rbm4.3	100	69.945	ENSPNAG00000013053	rbm4.3	100	69.945	Pygocentrus_nattereri
ENSSFOG00015015563	rbm4.3	100	69.252	ENSSMAG00000013644	rbm4.3	100	69.252	Scophthalmus_maximus
ENSSFOG00015015563	rbm4.3	97	56.980	ENSSMAG00000013653	rbm4.3	99	56.749	Scophthalmus_maximus
ENSSFOG00015015563	rbm4.3	100	68.421	ENSSDUG00000018435	rbm4.3	100	68.421	Seriola_dumerili
ENSSFOG00015015563	rbm4.3	97	60.623	ENSSDUG00000018422	rbm4.3	98	60.335	Seriola_dumerili
ENSSFOG00015015563	rbm4.3	97	60.057	ENSSLDG00000017182	rbm4.3	98	59.777	Seriola_lalandi_dorsalis
ENSSFOG00015015563	rbm4.3	100	68.421	ENSSLDG00000017204	rbm4.3	100	68.421	Seriola_lalandi_dorsalis
ENSSFOG00015015563	rbm4.3	97	62.464	ENSSPAG00000008041	rbm4.3	85	62.983	Stegastes_partitus
ENSSFOG00015015563	rbm4.3	100	68.421	ENSSPAG00000008062	rbm4.3	100	68.144	Stegastes_partitus
ENSSFOG00015015563	rbm4.3	97	57.224	ENSTRUG00000023874	rbm4.3	99	59.178	Takifugu_rubripes
ENSSFOG00015015563	rbm4.3	100	67.218	ENSTRUG00000020901	rbm4.3	100	67.218	Takifugu_rubripes
ENSSFOG00015015563	rbm4.3	100	64.820	ENSTNIG00000005668	rbm4.3	100	64.820	Tetraodon_nigroviridis
ENSSFOG00015015563	rbm4.3	97	59.490	ENSXCOG00000005996	rbm4.3	100	59.673	Xiphophorus_couchianus
ENSSFOG00015015563	rbm4.3	100	61.475	ENSXCOG00000006001	rbm4.3	100	62.568	Xiphophorus_couchianus
ENSSFOG00015015563	rbm4.3	97	59.040	ENSXMAG00000025173	rbm4.3	99	59.836	Xiphophorus_maculatus
ENSSFOG00015015563	rbm4.3	100	61.475	ENSXMAG00000021997	rbm4.3	100	62.568	Xiphophorus_maculatus
ENSSFOG00015015563	rbm4.3	100	61.749	ENSXMAG00000011698	rbm4.3	100	63.115	Xiphophorus_maculatus