EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9313 bases
Position: chrKV410913.1:694187-703499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024597	zf-CCHC	PF00098.23	2.8e-07	1	1
ENSSFOP00015024608	zf-CCHC	PF00098.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024876	-	603	-	ENSSFOP00015024608	200 (aa)	-	-
ENSSFOT00015024865	-	927	-	ENSSFOP00015024597	308 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015015819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015819	-	75	53.361	ENSSFOG00015023501	-	52	53.361
ENSSFOG00015015819	-	58	80.000	ENSSFOG00015016511	-	76	90.476
ENSSFOG00015015819	-	71	89.437	ENSSFOG00015012405	-	90	83.333
ENSSFOG00015015819	-	59	71.795	ENSSFOG00015023899	-	73	72.581
ENSSFOG00015015819	-	69	81.884	ENSSFOG00015017573	-	75	84.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015819	-	61	32.787	ENSATEG00000004599	-	58	33.333	Anabas_testudineus
ENSSFOG00015015819	-	72	44.755	ENSACLG00000019773	-	56	36.264	Astatotilapia_calliptera
ENSSFOG00015015819	-	71	43.662	ENSACLG00000011316	-	78	46.012	Astatotilapia_calliptera
ENSSFOG00015015819	-	97	35.897	ENSACLG00000014014	-	86	35.897	Astatotilapia_calliptera
ENSSFOG00015015819	-	72	44.056	ENSACLG00000019767	-	61	36.328	Astatotilapia_calliptera
ENSSFOG00015015819	-	72	41.958	ENSACLG00000019919	-	91	44.056	Astatotilapia_calliptera
ENSSFOG00015015819	-	83	35.686	ENSACLG00000019815	-	54	35.686	Astatotilapia_calliptera
ENSSFOG00015015819	-	71	43.662	ENSACLG00000015881	-	73	46.667	Astatotilapia_calliptera
ENSSFOG00015015819	-	60	30.833	ENSAMXG00000035711	-	59	30.833	Astyanax_mexicanus
ENSSFOG00015015819	-	63	37.600	ENSELUG00000002602	-	73	35.461	Esox_lucius
ENSSFOG00015015819	-	67	47.368	ENSGACG00000000773	-	85	47.297	Gasterosteus_aculeatus
ENSSFOG00015015819	-	65	49.231	ENSGACG00000018075	-	85	48.966	Gasterosteus_aculeatus
ENSSFOG00015015819	-	72	41.958	ENSHBUG00000001589	-	89	41.618	Haplochromis_burtoni
ENSSFOG00015015819	-	52	39.423	ENSHBUG00000011697	-	65	34.694	Haplochromis_burtoni
ENSSFOG00015015819	-	61	32.787	ENSHBUG00000005879	-	51	30.282	Haplochromis_burtoni
ENSSFOG00015015819	-	82	32.948	ENSIPUG00000013198	-	80	32.948	Ictalurus_punctatus
ENSSFOG00015015819	-	84	31.361	ENSLACG00000002864	-	54	31.361	Latimeria_chalumnae
ENSSFOG00015015819	-	67	40.602	ENSLOCG00000006695	-	86	38.255	Lepisosteus_oculatus
ENSSFOG00015015819	-	72	42.553	ENSLOCG00000000320	-	86	39.130	Lepisosteus_oculatus
ENSSFOG00015015819	-	67	36.090	ENSLOCG00000017302	-	86	36.242	Lepisosteus_oculatus
ENSSFOG00015015819	-	66	45.918	ENSLOCG00000012680	-	91	44.248	Lepisosteus_oculatus
ENSSFOG00015015819	-	67	36.567	ENSLOCG00000017641	-	100	38.462	Lepisosteus_oculatus
ENSSFOG00015015819	-	90	37.430	ENSLOCG00000017974	-	89	37.430	Lepisosteus_oculatus
ENSSFOG00015015819	-	62	47.154	ENSLOCG00000010606	-	94	47.407	Lepisosteus_oculatus
ENSSFOG00015015819	-	66	38.636	ENSLOCG00000018355	-	87	37.584	Lepisosteus_oculatus
ENSSFOG00015015819	-	64	39.062	ENSLOCG00000017530	-	88	37.500	Lepisosteus_oculatus
ENSSFOG00015015819	-	61	36.885	ENSLOCG00000017867	-	79	37.226	Lepisosteus_oculatus
ENSSFOG00015015819	-	71	39.344	ENSLOCG00000000632	-	80	38.686	Lepisosteus_oculatus
ENSSFOG00015015819	-	64	43.750	ENSLOCG00000017501	-	85	42.553	Lepisosteus_oculatus
ENSSFOG00015015819	-	67	36.842	ENSLOCG00000017503	-	92	34.940	Lepisosteus_oculatus
ENSSFOG00015015819	-	63	38.095	ENSLOCG00000002624	-	92	32.099	Lepisosteus_oculatus
ENSSFOG00015015819	-	79	38.217	ENSLOCG00000017670	-	97	38.743	Lepisosteus_oculatus
ENSSFOG00015015819	-	65	52.041	ENSLOCG00000000361	-	93	50.427	Lepisosteus_oculatus
ENSSFOG00015015819	-	59	40.171	ENSLOCG00000017623	-	55	40.146	Lepisosteus_oculatus
ENSSFOG00015015819	-	64	45.669	ENSLOCG00000017694	-	84	43.151	Lepisosteus_oculatus
ENSSFOG00015015819	-	68	44.444	ENSLOCG00000017303	-	81	45.098	Lepisosteus_oculatus
ENSSFOG00015015819	-	61	40.164	ENSLOCG00000000602	-	91	39.568	Lepisosteus_oculatus
ENSSFOG00015015819	-	69	47.321	ENSLOCG00000008338	-	93	46.512	Lepisosteus_oculatus
ENSSFOG00015015819	-	88	36.000	ENSLOCG00000017639	-	94	36.000	Lepisosteus_oculatus
ENSSFOG00015015819	-	66	36.364	ENSLOCG00000017327	-	100	36.986	Lepisosteus_oculatus
ENSSFOG00015015819	-	67	40.602	ENSLOCG00000017328	-	86	40.816	Lepisosteus_oculatus
ENSSFOG00015015819	-	66	34.848	ENSLOCG00000017824	-	100	34.286	Lepisosteus_oculatus
ENSSFOG00015015819	-	70	41.353	ENSLOCG00000000297	-	88	40.000	Lepisosteus_oculatus
ENSSFOG00015015819	-	66	34.848	ENSLOCG00000017305	-	100	35.616	Lepisosteus_oculatus
ENSSFOG00015015819	-	78	35.256	ENSLOCG00000018075	-	79	36.364	Lepisosteus_oculatus
ENSSFOG00015015819	-	71	43.662	ENSMZEG00005028130	-	71	46.667	Maylandia_zebra
ENSSFOG00015015819	-	62	49.580	ENSMZEG00005028547	-	91	49.580	Maylandia_zebra
ENSSFOG00015015819	-	71	43.662	ENSMZEG00005028553	-	72	46.667	Maylandia_zebra
ENSSFOG00015015819	-	72	44.755	ENSMZEG00005000211	-	68	35.507	Maylandia_zebra
ENSSFOG00015015819	-	72	44.755	ENSMZEG00005028125	-	60	37.795	Maylandia_zebra
ENSSFOG00015015819	-	78	34.855	ENSNBRG00000024091	-	60	34.855	Neolamprologus_brichardi
ENSSFOG00015015819	-	68	44.444	ENSNBRG00000024092	-	75	44.667	Neolamprologus_brichardi
ENSSFOG00015015819	-	62	34.146	ENSOARG00000019161	ZCCHC3	51	30.968	Ovis_aries
ENSSFOG00015015819	-	62	34.146	ENSPPAG00000010453	-	51	32.847	Pan_paniscus
ENSSFOG00015015819	-	76	31.613	ENSPTIG00000009393	ZCCHC3	67	31.613	Panthera_tigris_altaica
ENSSFOG00015015819	-	83	52.410	ENSPKIG00000015947	-	69	61.538	Paramormyrops_kingsleyae
ENSSFOG00015015819	-	61	33.607	ENSPNYG00000002656	-	77	32.117	Pundamilia_nyererei
ENSSFOG00015015819	-	79	36.777	ENSPNYG00000003800	-	53	36.777	Pundamilia_nyererei
ENSSFOG00015015819	-	63	51.200	ENSPNAG00000007153	-	65	51.181	Pygocentrus_nattereri
ENSSFOG00015015819	-	70	51.079	ENSPNAG00000004865	-	76	54.054	Pygocentrus_nattereri
ENSSFOG00015015819	-	62	33.333	ENSVPAG00000011267	-	54	32.117	Vicugna_pacos
ENSSFOG00015015819	-	93	33.333	ENSXETG00000030090	-	94	33.333	Xenopus_tropicalis
ENSSFOG00015015819	-	62	32.258	ENSXETG00000032242	-	93	32.075	Xenopus_tropicalis
ENSSFOG00015015819	-	63	31.746	ENSXETG00000033641	-	78	32.283	Xenopus_tropicalis
ENSSFOG00015015819	-	59	32.479	ENSXETG00000032402	-	80	31.387	Xenopus_tropicalis
ENSSFOG00015015819	-	59	32.479	ENSXETG00000031282	-	80	31.387	Xenopus_tropicalis
ENSSFOG00015015819	-	65	45.926	ENSXETG00000034305	-	95	42.949	Xenopus_tropicalis
ENSSFOG00015015819	-	62	44.715	ENSXETG00000030161	-	88	44.218	Xenopus_tropicalis
ENSSFOG00015015819	-	59	32.479	ENSXETG00000032297	-	80	31.387	Xenopus_tropicalis