EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015840 (Gene tree)
Gene ID: 108923932
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein 70 kDa-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 13413 bases
Position: chrKV410830.1:148453-161865
Accession: 108923932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024627	RRM_1	PF00076.22	1.9e-19	1	1
ENSSFOP00015024627	U1snRNP70_N	PF12220.8	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015024896	-	2891	XM_018734998	ENSSFOP00015024627	500 (aa)	XP_018590514	A0A1W4YFY7

Gene Model

Click here to download ENSSFOG00015015840's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015840	-	100	71.116	ENSSFOG00015004562	snrnp70	74	81.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015840	-	50	93.651	ENSPKIG00000004513	-	100	79.961	Paramormyrops_kingsleyae