EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015015878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7659 bases
Position: chrKV411167.1:10006691-10014349
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	1	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	2	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	3	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	4	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	5	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	6	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	7	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	8	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	9	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	10	11
ENSSFOP00015024691	zf-C2H2	PF00096.26	6.5e-59	11	11
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	1	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	2	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	3	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	4	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	5	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	6	7
ENSSFOP00015024735	zf-C2H2	PF00096.26	5.8e-38	7	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	1	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	2	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	3	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	4	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	5	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	6	7
ENSSFOP00015024745	zf-C2H2	PF00096.26	7.3e-38	7	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	1	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	2	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	3	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	4	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	5	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	6	7
ENSSFOP00015024868	zf-C2H2	PF00096.26	9.6e-35	7	7
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	1	6
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	2	6
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	3	6
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	4	6
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	5	6
ENSSFOP00015024789	zf-C2H2	PF00096.26	4e-34	6	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	1	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	2	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	3	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	4	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	5	6
ENSSFOP00015024821	zf-C2H2	PF00096.26	6.1e-31	6	6
ENSSFOP00015024821	zf-met	PF12874.7	5.2e-09	1	1
ENSSFOP00015024735	zf-met	PF12874.7	5.9e-09	1	1
ENSSFOP00015024745	zf-met	PF12874.7	7.3e-09	1	1
ENSSFOP00015024868	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025013	-	879	-	ENSSFOP00015024745	292 (aa)	-	-
ENSSFOT00015025003	-	861	-	ENSSFOP00015024735	286 (aa)	-	-
ENSSFOT00015025057	-	1314	-	ENSSFOP00015024789	437 (aa)	-	-
ENSSFOT00015025141	-	888	-	ENSSFOP00015024868	295 (aa)	-	-
ENSSFOT00015025089	-	762	-	ENSSFOP00015024821	253 (aa)	-	-
ENSSFOT00015024959	-	1326	-	ENSSFOP00015024691	441 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015015878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015015878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015015878	-	89	41.135	ENSSFOG00015018025	SNAI2	57	41.135
ENSSFOG00015015878	-	93	33.043	ENSSFOG00015019679	-	81	33.043
ENSSFOG00015015878	-	91	45.276	ENSSFOG00015021831	-	78	50.481
ENSSFOG00015015878	-	91	45.370	ENSSFOG00015011531	-	88	51.163
ENSSFOG00015015878	-	96	32.061	ENSSFOG00015017155	-	92	32.510
ENSSFOG00015015878	-	94	49.057	ENSSFOG00015001117	rreb1b	53	49.057
ENSSFOG00015015878	-	90	38.140	ENSSFOG00015012207	-	86	38.140
ENSSFOG00015015878	-	97	49.590	ENSSFOG00015000652	ZNF775	92	49.590
ENSSFOG00015015878	-	90	44.595	ENSSFOG00015023669	-	96	42.857
ENSSFOG00015015878	-	95	34.000	ENSSFOG00015004064	-	53	34.000
ENSSFOG00015015878	-	94	49.020	ENSSFOG00015008994	znf236	74	42.308
ENSSFOG00015015878	-	93	39.474	ENSSFOG00015021578	snai1a	68	39.474
ENSSFOG00015015878	-	92	39.464	ENSSFOG00015020478	prdm5	74	39.464
ENSSFOG00015015878	-	88	41.748	ENSSFOG00015021176	-	54	41.748
ENSSFOG00015015878	-	88	46.000	ENSSFOG00015012223	sall3a	75	35.417
ENSSFOG00015015878	-	85	43.434	ENSSFOG00015021699	si:ch211-166g5.4	73	35.088
ENSSFOG00015015878	-	93	46.154	ENSSFOG00015004737	si:dkey-89b17.4	85	46.154
ENSSFOG00015015878	-	89	42.647	ENSSFOG00015016115	snai3	77	42.647
ENSSFOG00015015878	-	91	49.206	ENSSFOG00015020993	-	84	46.328
ENSSFOG00015015878	-	95	48.148	ENSSFOG00015015384	-	91	48.148
ENSSFOG00015015878	-	89	36.111	ENSSFOG00015007599	ZNF521	56	36.111
ENSSFOG00015015878	-	96	47.945	ENSSFOG00015013448	-	94	48.548
ENSSFOG00015015878	-	95	34.225	ENSSFOG00015014678	znf341	50	35.928
ENSSFOG00015015878	-	95	42.979	ENSSFOG00015003121	znf668	89	42.915
ENSSFOG00015015878	-	96	42.920	ENSSFOG00015015958	-	60	44.037
ENSSFOG00015015878	-	98	38.983	ENSSFOG00015012089	ZNF319	98	36.517
ENSSFOG00015015878	-	93	49.180	ENSSFOG00015019818	-	93	44.048
ENSSFOG00015015878	-	91	44.444	ENSSFOG00015021291	e4f1	65	40.179
ENSSFOG00015015878	-	95	50.000	ENSSFOG00015008577	-	99	44.792
ENSSFOG00015015878	-	93	46.129	ENSSFOG00015009678	-	67	44.344
ENSSFOG00015015878	-	91	50.413	ENSSFOG00015010829	-	74	50.413
ENSSFOG00015015878	-	87	39.726	ENSSFOG00015001195	SCRT1	57	36.567
ENSSFOG00015015878	-	94	46.939	ENSSFOG00015001123	-	54	45.763
ENSSFOG00015015878	-	94	37.634	ENSSFOG00015014778	znf526	61	37.634
ENSSFOG00015015878	-	92	44.615	ENSSFOG00015006108	-	62	44.615
ENSSFOG00015015878	-	89	45.000	ENSSFOG00015023295	znf652	88	39.205
ENSSFOG00015015878	-	95	33.333	ENSSFOG00015013930	PRDM15	55	32.735
ENSSFOG00015015878	-	95	44.554	ENSSFOG00015008114	-	52	44.554
ENSSFOG00015015878	-	89	41.818	ENSSFOG00015010128	ZNF521	96	34.711
ENSSFOG00015015878	-	95	43.976	ENSSFOG00015006083	-	60	43.976
ENSSFOG00015015878	-	87	38.938	ENSSFOG00015015427	znf366	58	35.587

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015015878	-	98	46.729	ENSAPOG00000006303	-	94	46.311	Acanthochromis_polyacanthus
ENSSFOG00015015878	-	94	41.736	ENSAPOG00000019960	-	94	41.736	Acanthochromis_polyacanthus
ENSSFOG00015015878	-	93	50.980	ENSAPOG00000008802	-	99	48.705	Acanthochromis_polyacanthus
ENSSFOG00015015878	-	93	49.799	ENSACIG00000022658	-	97	49.799	Amphilophus_citrinellus
ENSSFOG00015015878	-	94	47.826	ENSACIG00000004745	-	94	44.737	Amphilophus_citrinellus
ENSSFOG00015015878	-	98	46.311	ENSAOCG00000014165	-	91	46.311	Amphiprion_ocellaris
ENSSFOG00015015878	-	97	46.311	ENSAOCG00000013130	-	93	46.311	Amphiprion_ocellaris
ENSSFOG00015015878	-	90	48.113	ENSAOCG00000013710	-	88	48.113	Amphiprion_ocellaris
ENSSFOG00015015878	-	97	46.311	ENSAPEG00000009383	-	83	46.753	Amphiprion_percula
ENSSFOG00015015878	-	96	46.930	ENSAPEG00000006650	-	93	46.930	Amphiprion_percula
ENSSFOG00015015878	-	93	46.703	ENSATEG00000015695	-	98	48.770	Anabas_testudineus
ENSSFOG00015015878	-	92	48.341	ENSATEG00000017618	-	98	48.770	Anabas_testudineus
ENSSFOG00015015878	-	98	44.304	ENSACLG00000018746	-	96	45.226	Astatotilapia_calliptera
ENSSFOG00015015878	-	98	48.276	ENSACLG00000023513	-	87	50.000	Astatotilapia_calliptera
ENSSFOG00015015878	-	96	41.356	ENSACLG00000019291	-	96	42.400	Astatotilapia_calliptera
ENSSFOG00015015878	-	97	46.725	ENSACLG00000021343	-	97	45.685	Astatotilapia_calliptera
ENSSFOG00015015878	-	94	44.516	ENSACLG00000026703	-	74	44.516	Astatotilapia_calliptera
ENSSFOG00015015878	-	90	50.820	ENSAMXG00000042275	-	99	50.820	Astyanax_mexicanus
ENSSFOG00015015878	-	98	45.327	ENSAMXG00000043302	-	82	45.455	Astyanax_mexicanus
ENSSFOG00015015878	-	95	50.980	ENSAMXG00000035920	-	94	50.980	Astyanax_mexicanus
ENSSFOG00015015878	-	96	47.773	ENSAMXG00000041975	-	99	48.205	Astyanax_mexicanus
ENSSFOG00015015878	-	93	46.667	ENSAMXG00000039408	-	95	48.947	Astyanax_mexicanus
ENSSFOG00015015878	-	97	48.315	ENSBTAG00000016191	ZNF32	82	48.315	Bos_taurus
ENSSFOG00015015878	-	97	48.315	ENSCHIG00000021099	ZNF32	82	48.315	Capra_hircus
ENSSFOG00015015878	-	91	43.125	ENSCSAVG00000001808	-	100	43.913	Ciona_savignyi
ENSSFOG00015015878	-	97	44.444	ENSCVAG00000021225	-	96	51.724	Cyprinodon_variegatus
ENSSFOG00015015878	-	98	49.032	ENSDARG00000099986	si:ch211-207i20.2	66	49.032	Danio_rerio
ENSSFOG00015015878	-	97	47.753	ENSDNOG00000035046	ZNF32	82	47.753	Dasypus_novemcinctus
ENSSFOG00015015878	-	97	48.315	ENSEASG00005006910	ZNF32	82	48.315	Equus_asinus_asinus
ENSSFOG00015015878	-	97	48.315	ENSECAG00000023676	ZNF32	82	48.315	Equus_caballus
ENSSFOG00015015878	-	97	46.809	ENSELUG00000021229	-	84	49.123	Esox_lucius
ENSSFOG00015015878	-	97	47.541	ENSFHEG00000018063	-	97	47.541	Fundulus_heteroclitus
ENSSFOG00015015878	-	93	43.299	ENSFHEG00000000678	-	92	45.349	Fundulus_heteroclitus
ENSSFOG00015015878	-	94	43.978	ENSGAFG00000020499	-	67	46.903	Gambusia_affinis
ENSSFOG00015015878	-	92	46.154	ENSGACG00000010352	si:ch211-207i20.2	62	48.815	Gasterosteus_aculeatus
ENSSFOG00015015878	-	94	46.154	ENSHBUG00000015166	-	90	45.320	Haplochromis_burtoni
ENSSFOG00015015878	-	94	40.952	ENSHBUG00000013296	-	98	46.835	Haplochromis_burtoni
ENSSFOG00015015878	-	90	49.130	ENSHBUG00000021003	-	97	49.130	Haplochromis_burtoni
ENSSFOG00015015878	-	95	48.560	ENSIPUG00000021998	-	91	48.560	Ictalurus_punctatus
ENSSFOG00015015878	-	95	45.455	ENSIPUG00000002655	-	98	48.276	Ictalurus_punctatus
ENSSFOG00015015878	-	97	46.396	ENSIPUG00000023761	-	79	46.396	Ictalurus_punctatus
ENSSFOG00015015878	-	95	45.565	ENSIPUG00000005733	-	80	44.970	Ictalurus_punctatus
ENSSFOG00015015878	-	95	46.884	ENSIPUG00000022741	-	92	46.606	Ictalurus_punctatus
ENSSFOG00015015878	-	98	46.766	ENSLBEG00000020128	-	94	48.000	Labrus_bergylta
ENSSFOG00015015878	-	83	47.644	ENSMMUG00000042578	ZNF32	91	47.753	Macaca_mulatta
ENSSFOG00015015878	-	97	43.860	ENSMAMG00000014734	-	54	43.972	Mastacembelus_armatus
ENSSFOG00015015878	-	91	43.868	ENSMZEG00005026082	-	75	44.828	Maylandia_zebra
ENSSFOG00015015878	-	95	44.167	ENSMZEG00005019918	-	98	46.988	Maylandia_zebra
ENSSFOG00015015878	-	99	41.991	ENSMZEG00005014592	-	94	39.819	Maylandia_zebra
ENSSFOG00015015878	-	99	37.054	ENSMZEG00005020156	-	79	39.906	Maylandia_zebra
ENSSFOG00015015878	-	98	39.726	ENSMZEG00005020162	-	80	43.452	Maylandia_zebra
ENSSFOG00015015878	-	97	43.725	ENSMZEG00005025343	-	83	43.725	Maylandia_zebra
ENSSFOG00015015878	-	93	45.783	ENSMZEG00005003336	-	79	47.458	Maylandia_zebra
ENSSFOG00015015878	-	97	45.783	ENSMZEG00005021052	-	75	48.035	Maylandia_zebra
ENSSFOG00015015878	-	95	45.821	ENSMZEG00005007262	-	99	47.236	Maylandia_zebra
ENSSFOG00015015878	-	92	40.500	ENSMZEG00005012715	-	75	40.500	Maylandia_zebra
ENSSFOG00015015878	-	92	44.615	ENSMMOG00000006131	-	91	44.615	Mola_mola
ENSSFOG00015015878	-	96	45.528	ENSMMOG00000010703	-	95	52.055	Mola_mola
ENSSFOG00015015878	-	95	45.161	ENSMMOG00000004460	-	97	44.800	Mola_mola
ENSSFOG00015015878	-	92	50.746	ENSMALG00000007051	-	99	48.826	Monopterus_albus
ENSSFOG00015015878	-	95	46.939	ENSMALG00000004216	-	72	43.891	Monopterus_albus
ENSSFOG00015015878	-	91	47.899	ENSMALG00000015655	-	96	52.874	Monopterus_albus
ENSSFOG00015015878	-	83	47.712	ENSMUSG00000059689	Zfp637	83	47.753	Mus_musculus
ENSSFOG00015015878	-	97	47.753	MGP_PahariEiJ_G0022533	Zfp637	83	47.753	Mus_pahari
ENSSFOG00015015878	-	97	47.753	MGP_SPRETEiJ_G0029809	Zfp637	83	47.753	Mus_spretus
ENSSFOG00015015878	-	97	47.753	ENSNGAG00000020281	Zfp637	82	47.753	Nannospalax_galili
ENSSFOG00015015878	-	96	39.921	ENSNBRG00000016564	-	86	37.220	Neolamprologus_brichardi
ENSSFOG00015015878	-	98	41.071	ENSNBRG00000005805	-	94	42.262	Neolamprologus_brichardi
ENSSFOG00015015878	-	92	46.784	ENSNBRG00000003000	-	85	49.708	Neolamprologus_brichardi
ENSSFOG00015015878	-	97	38.947	ENSNBRG00000005796	-	97	42.347	Neolamprologus_brichardi
ENSSFOG00015015878	-	99	37.308	ENSNBRG00000005849	-	92	41.518	Neolamprologus_brichardi
ENSSFOG00015015878	-	94	46.322	ENSNBRG00000000523	-	80	46.322	Neolamprologus_brichardi
ENSSFOG00015015878	-	93	38.166	ENSONIG00000015552	-	92	41.477	Oreochromis_niloticus
ENSSFOG00015015878	-	99	36.577	ENSONIG00000005693	-	97	41.429	Oreochromis_niloticus
ENSSFOG00015015878	-	92	41.878	ENSONIG00000015514	-	87	44.033	Oreochromis_niloticus
ENSSFOG00015015878	-	97	48.315	ENSOARG00000002999	ZNF32	82	48.315	Ovis_aries
ENSSFOG00015015878	-	91	46.288	ENSPKIG00000014786	-	51	46.288	Paramormyrops_kingsleyae
ENSSFOG00015015878	-	93	43.871	ENSPLAG00000015973	-	99	44.395	Poecilia_latipinna
ENSSFOG00015015878	-	97	44.534	ENSPMEG00000016458	-	99	41.298	Poecilia_mexicana
ENSSFOG00015015878	-	99	43.284	ENSPMEG00000006726	-	99	41.451	Poecilia_mexicana
ENSSFOG00015015878	-	98	44.860	ENSPREG00000010437	-	82	47.368	Poecilia_reticulata
ENSSFOG00015015878	-	98	41.975	ENSPCAG00000005270	-	99	39.503	Procavia_capensis
ENSSFOG00015015878	-	90	49.356	ENSPVAG00000009430	-	84	44.350	Pteropus_vampyrus
ENSSFOG00015015878	-	97	48.387	ENSPNYG00000002684	-	98	48.387	Pundamilia_nyererei
ENSSFOG00015015878	-	91	45.408	ENSPNYG00000007597	-	84	45.408	Pundamilia_nyererei
ENSSFOG00015015878	-	92	45.378	ENSPNAG00000029997	-	86	46.939	Pygocentrus_nattereri
ENSSFOG00015015878	-	93	48.819	ENSSDUG00000015254	-	89	51.515	Seriola_dumerili
ENSSFOG00015015878	-	91	49.407	ENSSDUG00000015182	-	74	44.987	Seriola_dumerili
ENSSFOG00015015878	-	97	48.133	ENSSDUG00000008943	-	99	48.133	Seriola_dumerili
ENSSFOG00015015878	-	96	41.379	ENSSDUG00000015159	-	98	40.164	Seriola_dumerili
ENSSFOG00015015878	-	97	45.455	ENSSLDG00000018273	-	87	45.455	Seriola_lalandi_dorsalis
ENSSFOG00015015878	-	97	46.311	ENSSLDG00000020675	-	99	46.311	Seriola_lalandi_dorsalis
ENSSFOG00015015878	-	92	46.622	ENSSLDG00000012036	-	98	46.622	Seriola_lalandi_dorsalis
ENSSFOG00015015878	-	91	47.036	ENSSARG00000000532	-	85	48.558	Sorex_araneus
ENSSFOG00015015878	-	83	47.644	ENSSSCG00000010416	ZNF32	91	47.753	Sus_scrofa
ENSSFOG00015015878	-	97	42.400	ENSXCOG00000008116	-	97	46.875	Xiphophorus_couchianus