EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016000 (Gene tree)
Gene ID: 108921429
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39A-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 4215 bases
Position: chrKV410778.1:8540196-8544410
Accession: 108921429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024884	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025158	-	2945	XM_018730906	ENSSFOP00015024884	216 (aa)	XP_018586422	A0A0P7V005

Gene Model

Click here to download ENSSFOG00015016000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016000	-	93	32.338	ENSSFOG00015014517	rab5a	90	32.338
ENSSFOG00015016000	-	83	40.223	ENSSFOG00015020836	rab1ba	88	40.223
ENSSFOG00015016000	-	93	38.308	ENSSFOG00015015034	rab2a	93	38.308
ENSSFOG00015016000	-	57	36.290	ENSSFOG00015011157	-	90	31.429
ENSSFOG00015016000	-	81	39.655	ENSSFOG00015017296	rab15	81	39.655
ENSSFOG00015016000	-	63	34.559	ENSSFOG00015020319	mras	84	33.333
ENSSFOG00015016000	-	80	39.884	ENSSFOG00015024042	rab11a	79	39.884
ENSSFOG00015016000	-	97	46.262	ENSSFOG00015003628	-	100	46.262
ENSSFOG00015016000	-	84	33.702	ENSSFOG00015015336	rab4a	84	33.702
ENSSFOG00015016000	-	81	39.080	ENSSFOG00015021448	-	81	39.080
ENSSFOG00015016000	-	92	34.975	ENSSFOG00015000053	rab9a	88	34.975
ENSSFOG00015016000	-	93	32.020	ENSSFOG00015005076	zgc:100918	95	32.020
ENSSFOG00015016000	-	78	33.889	ENSSFOG00015021180	RAB7A	86	33.889
ENSSFOG00015016000	-	78	36.628	ENSSFOG00015003259	rab9a	80	36.628
ENSSFOG00015016000	-	52	36.283	ENSSFOG00015006846	-	86	31.098
ENSSFOG00015016000	-	72	34.615	ENSSFOG00015005188	rab34	60	34.615
ENSSFOG00015016000	-	80	36.047	ENSSFOG00015009988	-	77	36.047
ENSSFOG00015016000	-	78	41.071	ENSSFOG00015006414	-	78	41.071
ENSSFOG00015016000	-	53	36.522	ENSSFOG00015023903	KRAS	86	31.325
ENSSFOG00015016000	-	80	36.628	ENSSFOG00015008657	rab25a	80	36.628
ENSSFOG00015016000	-	96	35.849	ENSSFOG00015012785	rab14	97	35.849
ENSSFOG00015016000	-	81	34.091	ENSSFOG00015012085	rab22a	85	34.091
ENSSFOG00015016000	-	95	46.977	ENSSFOG00015012088	rab42	96	46.977
ENSSFOG00015016000	-	69	37.333	ENSSFOG00015006175	zgc:101559	64	37.333
ENSSFOG00015016000	-	94	34.951	ENSSFOG00015019202	RAB6B	94	34.951
ENSSFOG00015016000	-	78	33.889	ENSSFOG00015020012	rab7a	86	33.889
ENSSFOG00015016000	-	97	48.131	ENSSFOG00015020732	rab42a	100	48.131
ENSSFOG00015016000	-	72	30.769	ENSSFOG00015020738	rabl2	67	30.769
ENSSFOG00015016000	-	72	36.306	ENSSFOG00015004325	rab34a	60	36.306
ENSSFOG00015016000	-	93	31.034	ENSSFOG00015011771	-	95	31.034
ENSSFOG00015016000	-	76	35.714	ENSSFOG00015020112	rab33b	76	35.714
ENSSFOG00015016000	-	94	32.850	ENSSFOG00015024034	rab33ba	95	32.870
ENSSFOG00015016000	-	97	34.112	ENSSFOG00015009244	rab39bb	100	34.112
ENSSFOG00015016000	-	69	38.000	ENSSFOG00015004253	rab33a	66	38.000
ENSSFOG00015016000	-	78	32.544	ENSSFOG00015016156	rab36	66	32.544
ENSSFOG00015016000	-	82	34.254	ENSSFOG00015006245	-	78	34.254
ENSSFOG00015016000	-	96	35.377	ENSSFOG00015011318	-	97	35.377
ENSSFOG00015016000	-	73	39.130	ENSSFOG00015012604	rab23	76	39.877
ENSSFOG00015016000	-	92	34.826	ENSSFOG00015010492	rab9b	96	34.826
ENSSFOG00015016000	-	97	35.426	ENSSFOG00015002077	rab6a	100	35.426
ENSSFOG00015016000	-	91	38.071	ENSSFOG00015000865	-	91	38.071
ENSSFOG00015016000	-	84	40.884	ENSSFOG00015011140	-	87	40.884
ENSSFOG00015016000	-	76	42.073	ENSSFOG00015017444	rab18a	66	42.073
ENSSFOG00015016000	-	73	40.000	ENSSFOG00015011268	RAB41	74	40.000
ENSSFOG00015016000	-	91	30.846	ENSSFOG00015009566	si:dkey-13a21.4	90	30.846
ENSSFOG00015016000	-	83	40.782	ENSSFOG00015001293	rab1ab	87	40.782
ENSSFOG00015016000	-	81	39.080	ENSSFOG00015008618	rab11al	79	39.080
ENSSFOG00015016000	-	78	38.462	ENSSFOG00015006076	rab35	82	38.462
ENSSFOG00015016000	-	82	40.449	ENSSFOG00015009042	rab11bb	80	40.449
ENSSFOG00015016000	-	93	34.158	ENSSFOG00015021115	-	90	34.158
ENSSFOG00015016000	-	57	35.484	ENSSFOG00015003051	hrasb	90	30.857
ENSSFOG00015016000	-	97	45.327	ENSSFOG00015018421	rab39b	100	45.327
ENSSFOG00015016000	-	61	34.483	ENSSFOG00015014423	rras2	81	34.483
ENSSFOG00015016000	-	75	31.325	ENSSFOG00015014992	rhebl1	86	31.325
ENSSFOG00015016000	-	81	39.205	ENSSFOG00015005464	zgc:171927	81	39.205
ENSSFOG00015016000	-	75	32.716	ENSSFOG00015023790	rheb	86	32.716
ENSSFOG00015016000	-	73	41.250	ENSSFOG00015004941	rab41	72	41.250
ENSSFOG00015016000	-	84	39.560	ENSSFOG00015021754	rab13	90	39.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016000	-	97	46.575	ENSAPOG00000009188	rab42a	100	46.575	Acanthochromis_polyacanthus
ENSSFOG00015016000	-	90	49.485	ENSACIG00000003102	rab42a	100	45.662	Amphilophus_citrinellus
ENSSFOG00015016000	-	97	46.119	ENSAOCG00000012921	rab42a	83	46.119	Amphiprion_ocellaris
ENSSFOG00015016000	-	97	46.119	ENSAPEG00000007713	rab42a	83	46.119	Amphiprion_percula
ENSSFOG00015016000	-	97	47.032	ENSATEG00000009052	rab42a	100	47.032	Anabas_testudineus
ENSSFOG00015016000	-	97	46.330	ENSACLG00000007514	rab42a	100	46.330	Astatotilapia_calliptera
ENSSFOG00015016000	-	97	47.664	ENSAMXG00000032729	rab42a	100	47.664	Astyanax_mexicanus
ENSSFOG00015016000	-	97	46.575	ENSCSEG00000010582	rab42a	100	46.575	Cynoglossus_semilaevis
ENSSFOG00015016000	-	98	67.925	ENSDARG00000102580	CU571310.1	100	67.925	Danio_rerio
ENSSFOG00015016000	-	97	46.262	ENSDARG00000034215	rab42a	100	46.262	Danio_rerio
ENSSFOG00015016000	-	97	47.005	ENSELUG00000010345	rab42a	100	47.005	Esox_lucius
ENSSFOG00015016000	-	97	46.575	ENSFHEG00000013106	rab42a	100	46.575	Fundulus_heteroclitus
ENSSFOG00015016000	-	97	45.662	ENSGAFG00000002141	rab42a	100	45.662	Gambusia_affinis
ENSSFOG00015016000	-	97	46.330	ENSHBUG00000015126	rab42a	82	46.330	Haplochromis_burtoni
ENSSFOG00015016000	-	97	47.196	ENSIPUG00000011376	rab42a	100	47.196	Ictalurus_punctatus
ENSSFOG00015016000	-	97	46.575	ENSKMAG00000007267	rab42a	100	47.032	Kryptolebias_marmoratus
ENSSFOG00015016000	-	97	46.789	ENSLBEG00000001193	rab42a	100	46.789	Labrus_bergylta
ENSSFOG00015016000	-	97	46.948	ENSLACG00000012755	-	100	46.948	Latimeria_chalumnae
ENSSFOG00015016000	-	97	47.418	ENSLOCG00000003453	rab42a	100	47.418	Lepisosteus_oculatus
ENSSFOG00015016000	-	98	75.234	ENSLOCG00000015825	-	100	75.234	Lepisosteus_oculatus
ENSSFOG00015016000	-	97	46.119	ENSMAMG00000002296	rab42a	100	46.575	Mastacembelus_armatus
ENSSFOG00015016000	-	97	46.330	ENSMZEG00005012460	rab42a	82	46.330	Maylandia_zebra
ENSSFOG00015016000	-	97	46.575	ENSMMOG00000014358	rab42a	100	46.575	Mola_mola
ENSSFOG00015016000	-	97	46.119	ENSNBRG00000021487	rab42a	82	46.119	Neolamprologus_brichardi
ENSSFOG00015016000	-	97	46.119	ENSORLG00000022335	rab42a	100	46.119	Oryzias_latipes
ENSSFOG00015016000	-	97	46.119	ENSORLG00020013895	rab42a	100	46.119	Oryzias_latipes_hni
ENSSFOG00015016000	-	97	46.119	ENSORLG00015004273	rab42a	100	46.119	Oryzias_latipes_hsok
ENSSFOG00015016000	-	97	46.119	ENSOMEG00000020418	rab42a	100	46.119	Oryzias_melastigma
ENSSFOG00015016000	-	97	48.131	ENSPKIG00000021215	-	100	48.131	Paramormyrops_kingsleyae
ENSSFOG00015016000	-	96	72.596	ENSPKIG00000015234	-	99	72.596	Paramormyrops_kingsleyae
ENSSFOG00015016000	-	90	50.000	ENSPMGG00000024112	rab42a	89	50.000	Periophthalmus_magnuspinnatus
ENSSFOG00015016000	-	97	45.662	ENSPFOG00000004838	rab42a	82	45.662	Poecilia_formosa
ENSSFOG00015016000	-	97	45.662	ENSPLAG00000005628	rab42a	100	45.662	Poecilia_latipinna
ENSSFOG00015016000	-	97	45.662	ENSPMEG00000019497	rab42a	100	45.662	Poecilia_mexicana
ENSSFOG00015016000	-	97	45.662	ENSPREG00000013962	rab42a	100	45.662	Poecilia_reticulata
ENSSFOG00015016000	-	97	46.330	ENSPNYG00000010325	rab42a	82	46.330	Pundamilia_nyererei
ENSSFOG00015016000	-	97	47.664	ENSPNAG00000016567	rab42a	100	47.664	Pygocentrus_nattereri
ENSSFOG00015016000	-	97	45.205	ENSSMAG00000020311	rab42a	100	45.205	Scophthalmus_maximus
ENSSFOG00015016000	-	97	46.119	ENSSDUG00000011851	rab42a	100	46.119	Seriola_dumerili
ENSSFOG00015016000	-	97	46.119	ENSSLDG00000020354	rab42a	100	46.119	Seriola_lalandi_dorsalis
ENSSFOG00015016000	-	97	46.119	ENSSPAG00000016167	rab42a	100	46.575	Stegastes_partitus
ENSSFOG00015016000	-	97	46.119	ENSTRUG00000010224	rab42a	100	46.119	Takifugu_rubripes
ENSSFOG00015016000	-	97	45.662	ENSXCOG00000003428	rab42a	100	45.662	Xiphophorus_couchianus
ENSSFOG00015016000	-	97	45.662	ENSXMAG00000028376	rab42a	100	45.662	Xiphophorus_maculatus