EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016055 (Gene tree)
Gene ID: 108936868
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12927 bases
Position: chrKV411125.1:1531357-1544283
Accession: 108936868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015024967	zf-RNPHF	PF08080.12	4.2e-09	1	1
ENSSFOP00015024984	zf-RNPHF	PF08080.12	4.7e-09	1	1
ENSSFOP00015025018	zf-RNPHF	PF08080.12	6.4e-08	1	1
ENSSFOP00015025018	RRM_1	PF00076.22	1.5e-31	1	3
ENSSFOP00015025018	RRM_1	PF00076.22	1.5e-31	2	3
ENSSFOP00015025018	RRM_1	PF00076.22	1.5e-31	3	3
ENSSFOP00015024984	RRM_1	PF00076.22	1.9e-31	1	3
ENSSFOP00015024984	RRM_1	PF00076.22	1.9e-31	2	3
ENSSFOP00015024984	RRM_1	PF00076.22	1.9e-31	3	3
ENSSFOP00015024967	RRM_1	PF00076.22	2.2e-31	1	3
ENSSFOP00015024967	RRM_1	PF00076.22	2.2e-31	2	3
ENSSFOP00015024967	RRM_1	PF00076.22	2.2e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025241	-	3217	-	ENSSFOP00015024967	442 (aa)	-	-
ENSSFOT00015025257	-	4151	-	ENSSFOP00015024984	428 (aa)	-	-
ENSSFOT00015025293	-	4085	XM_018756506	ENSSFOP00015025018	406 (aa)	XP_018612022	-

Gene Model

Click here to download ENSSFOG00015016055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016055	-	94	64.525	ENSSFOG00015015000	hnrnph3	91	65.642
ENSSFOG00015016055	-	82	39.773	ENSSFOG00015014620	grsf1	78	44.388
ENSSFOG00015016055	-	96	93.590	ENSSFOG00015022796	hnrnph1l	99	91.579
ENSSFOG00015016055	-	81	37.179	ENSSFOG00015001584	rbm12b	74	37.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016055	-	94	90.551	ENSAPOG00000016614	hnrnph1	99	88.442	Acanthochromis_polyacanthus
ENSSFOG00015016055	-	93	89.446	ENSACIG00000008964	hnrnph1	98	89.446	Amphilophus_citrinellus
ENSSFOG00015016055	-	94	90.551	ENSAOCG00000008372	hnrnph1	97	88.945	Amphiprion_ocellaris
ENSSFOG00015016055	-	94	90.814	ENSAPEG00000012980	hnrnph1	97	89.196	Amphiprion_percula
ENSSFOG00015016055	-	94	90.289	ENSATEG00000002792	hnrnph1	97	88.693	Anabas_testudineus
ENSSFOG00015016055	-	95	75.467	ENSACAG00000016323	-	92	76.566	Anolis_carolinensis
ENSSFOG00015016055	-	85	86.849	ENSACLG00000003313	hnrnph1	97	86.538	Astatotilapia_calliptera
ENSSFOG00015016055	-	94	89.764	ENSAMXG00000002483	hnrnph1	99	90.237	Astyanax_mexicanus
ENSSFOG00015016055	-	94	86.126	ENSAMXG00000030703	hnrnph1l	81	85.641	Astyanax_mexicanus
ENSSFOG00015016055	-	94	89.501	ENSCSEG00000015891	hnrnph1	98	88.354	Cynoglossus_semilaevis
ENSSFOG00015016055	-	94	88.451	ENSCVAG00000014097	hnrnph1	95	88.205	Cyprinodon_variegatus
ENSSFOG00015016055	-	94	89.474	ENSDARG00000040881	hnrnph1	99	86.783	Danio_rerio
ENSSFOG00015016055	-	96	88.747	ENSDARG00000005551	hnrnph1l	96	88.747	Danio_rerio
ENSSFOG00015016055	-	96	84.691	ENSELUG00000006715	hnrnph1	96	83.654	Esox_lucius
ENSSFOG00015016055	-	93	85.564	ENSELUG00000021437	-	99	88.451	Esox_lucius
ENSSFOG00015016055	-	94	88.451	ENSFHEG00000008474	hnrnph1	97	87.342	Fundulus_heteroclitus
ENSSFOG00015016055	-	93	83.333	ENSGMOG00000006782	hnrnph1	97	83.333	Gadus_morhua
ENSSFOG00015016055	-	94	89.501	ENSGAFG00000006280	hnrnph1	95	89.231	Gambusia_affinis
ENSSFOG00015016055	-	94	85.564	ENSGACG00000018352	hnrnph1	97	81.886	Gasterosteus_aculeatus
ENSSFOG00015016055	-	85	86.849	ENSHBUG00000010547	hnrnph1	98	86.301	Haplochromis_burtoni
ENSSFOG00015016055	-	94	80.203	ENSHCOG00000004513	hnrnph1	98	81.141	Hippocampus_comes
ENSSFOG00015016055	-	96	84.655	ENSIPUG00000024047	hnrnph1l	93	85.166	Ictalurus_punctatus
ENSSFOG00015016055	-	94	87.139	ENSIPUG00000018262	hnrnph1	97	86.035	Ictalurus_punctatus
ENSSFOG00015016055	-	94	86.979	ENSKMAG00000018802	hnrnph1	95	86.514	Kryptolebias_marmoratus
ENSSFOG00015016055	-	94	89.239	ENSLBEG00000027811	hnrnph1	97	87.688	Labrus_bergylta
ENSSFOG00015016055	-	94	85.024	ENSLOCG00000012510	hnrnph1	92	87.715	Lepisosteus_oculatus
ENSSFOG00015016055	-	88	55.699	ENSMMUG00000017392	-	91	54.703	Macaca_mulatta
ENSSFOG00015016055	-	88	55.699	ENSMNEG00000030544	-	91	54.703	Macaca_nemestrina
ENSSFOG00015016055	-	87	86.059	ENSMAMG00000011478	hnrnph1	99	86.059	Mastacembelus_armatus
ENSSFOG00015016055	-	94	89.501	ENSMZEG00005009791	hnrnph1	95	89.231	Maylandia_zebra
ENSSFOG00015016055	-	93	87.206	ENSMMOG00000009064	hnrnph1	98	86.945	Mola_mola
ENSSFOG00015016055	-	76	52.853	ENSMODG00000002200	-	99	54.354	Monodelphis_domestica
ENSSFOG00015016055	-	85	88.056	ENSMALG00000003999	hnrnph1	99	87.466	Monopterus_albus
ENSSFOG00015016055	-	85	86.849	ENSNBRG00000015406	hnrnph1	98	86.538	Neolamprologus_brichardi
ENSSFOG00015016055	-	94	89.764	ENSONIG00000017754	hnrnph1	95	89.487	Oreochromis_niloticus
ENSSFOG00015016055	-	94	86.822	ENSORLG00000006932	hnrnph1	97	84.901	Oryzias_latipes
ENSSFOG00015016055	-	94	86.563	ENSORLG00020007881	hnrnph1	97	84.653	Oryzias_latipes_hni
ENSSFOG00015016055	-	94	86.822	ENSORLG00015005306	hnrnph1	97	84.901	Oryzias_latipes_hsok
ENSSFOG00015016055	-	94	88.743	ENSOMEG00000009827	hnrnph1	99	88.654	Oryzias_melastigma
ENSSFOG00015016055	-	99	89.526	ENSPKIG00000018203	hnrnph1l	98	89.526	Paramormyrops_kingsleyae
ENSSFOG00015016055	-	94	91.315	ENSPKIG00000009532	-	95	91.019	Paramormyrops_kingsleyae
ENSSFOG00015016055	-	94	87.139	ENSPMGG00000012151	hnrnph1	97	85.678	Periophthalmus_magnuspinnatus
ENSSFOG00015016055	-	94	89.501	ENSPFOG00000004097	hnrnph1	95	89.231	Poecilia_formosa
ENSSFOG00015016055	-	94	89.501	ENSPLAG00000011771	hnrnph1	95	89.231	Poecilia_latipinna
ENSSFOG00015016055	-	94	89.764	ENSPMEG00000019446	hnrnph1	95	89.487	Poecilia_mexicana
ENSSFOG00015016055	-	94	89.764	ENSPREG00000005780	hnrnph1	95	89.487	Poecilia_reticulata
ENSSFOG00015016055	-	94	89.501	ENSPNYG00000000204	hnrnph1	98	86.301	Pundamilia_nyererei
ENSSFOG00015016055	-	96	86.445	ENSPNAG00000002784	hnrnph1l	98	84.225	Pygocentrus_nattereri
ENSSFOG00015016055	-	94	89.764	ENSPNAG00000000439	hnrnph1	98	89.147	Pygocentrus_nattereri
ENSSFOG00015016055	-	93	87.013	ENSSMAG00000007820	hnrnph1	96	86.494	Scophthalmus_maximus
ENSSFOG00015016055	-	94	90.551	ENSSDUG00000008785	hnrnph1	97	88.945	Seriola_dumerili
ENSSFOG00015016055	-	94	90.551	ENSSLDG00000010685	hnrnph1	97	88.945	Seriola_lalandi_dorsalis
ENSSFOG00015016055	-	95	89.610	ENSSPAG00000009921	hnrnph1	99	88.442	Stegastes_partitus
ENSSFOG00015016055	-	94	87.664	ENSTRUG00000020069	hnrnph1	95	87.692	Takifugu_rubripes
ENSSFOG00015016055	-	92	77.037	ENSXETG00000018321	hnrnph1	96	76.224	Xenopus_tropicalis
ENSSFOG00015016055	-	93	86.041	ENSXCOG00000009133	hnrnph1	97	84.518	Xiphophorus_couchianus
ENSSFOG00015016055	-	93	89.710	ENSXMAG00000021332	hnrnph1	99	89.710	Xiphophorus_maculatus