EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015016069 (Gene tree)
Gene ID
108927242
Gene Symbol
-
Alias
SNRPD1|Sm-D2
Full Name
small nuclear ribonucleoprotein Sm D2
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
1548 bases
Position
chrKV410866.1:55332-56879
Accession
108927242
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015024994LSMPF01423.221e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015025268-1182XM_018740406ENSSFOP00015024994118 (aa)XP_018595922A0A1W4YWJ0
Gene Model
Click here to download ENSSFOG00015016069's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016069's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015016069-6932.927ENSSFOG00015007071lsm37732.927
ENSSFOG00015016069-10099.153ENSSFOG00015022535snrpd210099.153
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015016069-100100.000ENSG00000125743SNRPD2100100.000Homo_sapiens
ENSSFOG00015016069-10098.305ENSAPOG00000012310snrpd210098.305Acanthochromis_polyacanthus
ENSSFOG00015016069-99100.000ENSAMEG00000000818-100100.000Ailuropoda_melanoleuca
ENSSFOG00015016069-9299.074ENSACIG00000022689snrpd210099.074Amphilophus_citrinellus
ENSSFOG00015016069-10098.305ENSAOCG00000024413snrpd210098.305Amphiprion_ocellaris
ENSSFOG00015016069-10098.305ENSAPEG00000021711snrpd210098.305Amphiprion_percula
ENSSFOG00015016069-9998.291ENSATEG00000000868snrpd29898.291Anabas_testudineus
ENSSFOG00015016069-99100.000ENSACAG00000016779-99100.000Anolis_carolinensis
ENSSFOG00015016069-9997.436ENSANAG00000001612-9897.436Aotus_nancymaae
ENSSFOG00015016069-10097.458ENSANAG00000003063-10097.458Aotus_nancymaae
ENSSFOG00015016069-10095.763ENSANAG00000018193-10095.763Aotus_nancymaae
ENSSFOG00015016069-10098.305ENSANAG00000017079-10098.305Aotus_nancymaae
ENSSFOG00015016069-10098.305ENSACLG00000001746snrpd210098.305Astatotilapia_calliptera
ENSSFOG00015016069-10099.153ENSAMXG00000033526snrpd210099.153Astyanax_mexicanus
ENSSFOG00015016069-100100.000ENSBTAG00000012177SNRPD2100100.000Bos_taurus
ENSSFOG00015016069-9781.579WBGene00004917snr-49781.579Caenorhabditis_elegans
ENSSFOG00015016069-10099.153ENSCJAG00000019291-10099.153Callithrix_jacchus
ENSSFOG00015016069-10098.305ENSCJAG00000044646-10098.305Callithrix_jacchus
ENSSFOG00015016069-10096.610ENSCJAG00000047147-10096.610Callithrix_jacchus
ENSSFOG00015016069-100100.000ENSCJAG00000012413-100100.000Callithrix_jacchus
ENSSFOG00015016069-10098.305ENSCJAG00000041687-10098.305Callithrix_jacchus
ENSSFOG00015016069-100100.000ENSCJAG00000044723-100100.000Callithrix_jacchus
ENSSFOG00015016069-10098.305ENSCJAG00000047157-10098.305Callithrix_jacchus
ENSSFOG00015016069-100100.000ENSCAFG00000004403SNRPD2100100.000Canis_familiaris
ENSSFOG00015016069-10090.678ENSCAFG00000000634-10090.678Canis_familiaris
ENSSFOG00015016069-10090.678ENSCAFG00020002921-10090.678Canis_lupus_dingo
ENSSFOG00015016069-93100.000ENSCAFG00020003532-98100.000Canis_lupus_dingo
ENSSFOG00015016069-9999.145ENSCHIG00000015755-9899.145Capra_hircus
ENSSFOG00015016069-9780.870ENSTSYG00000031156-9676.522Carlito_syrichta
ENSSFOG00015016069-100100.000ENSTSYG00000011207-100100.000Carlito_syrichta
ENSSFOG00015016069-99100.000ENSCAPG00000011695-98100.000Cavia_aperea
ENSSFOG00015016069-10086.441ENSCAPG00000006559-10085.593Cavia_aperea
ENSSFOG00015016069-100100.000ENSCPOG00000035154-100100.000Cavia_porcellus
ENSSFOG00015016069-10088.983ENSCPOG00000025735-10088.983Cavia_porcellus
ENSSFOG00015016069-100100.000ENSCCAG00000035396SNRPD2100100.000Cebus_capucinus
ENSSFOG00015016069-10099.153ENSCCAG00000011183-10099.153Cebus_capucinus
ENSSFOG00015016069-10080.508ENSCCAG00000030191-10080.508Cebus_capucinus
ENSSFOG00015016069-10095.763ENSCCAG00000012011-10095.763Cebus_capucinus
ENSSFOG00015016069-10075.424ENSCCAG00000020956-10075.424Cebus_capucinus
ENSSFOG00015016069-10098.305ENSCATG00000031591-10098.305Cercocebus_atys
ENSSFOG00015016069-9889.655ENSCATG00000040410-99100.000Cercocebus_atys
ENSSFOG00015016069-10099.153ENSCATG00000005272-10099.153Cercocebus_atys
ENSSFOG00015016069-10078.814ENSCLAG00000001183-10078.814Chinchilla_lanigera
ENSSFOG00015016069-9383.636ENSCLAG00000017381-9983.636Chinchilla_lanigera
ENSSFOG00015016069-100100.000ENSCLAG00000000931-100100.000Chinchilla_lanigera
ENSSFOG00015016069-100100.000ENSCSAG00000003157SNRPD2100100.000Chlorocebus_sabaeus
ENSSFOG00015016069-100100.000ENSCPBG00000007259SNRPD2100100.000Chrysemys_picta_bellii
ENSSFOG00015016069-10078.814ENSCING00000020031-10078.814Ciona_intestinalis
ENSSFOG00015016069-9582.143ENSCSAVG00000003527-9182.143Ciona_savignyi
ENSSFOG00015016069-10099.153ENSCANG00000038535-10099.153Colobus_angolensis_palliatus
ENSSFOG00015016069-10072.881ENSCANG00000035956-10072.881Colobus_angolensis_palliatus
ENSSFOG00015016069-10087.288ENSCGRG00001003078-10087.288Cricetulus_griseus_chok1gshd
ENSSFOG00015016069-9994.872ENSCGRG00000011635-10094.872Cricetulus_griseus_crigri
ENSSFOG00015016069-10098.305ENSCSEG00000002230snrpd210098.305Cynoglossus_semilaevis
ENSSFOG00015016069-10098.305ENSCVAG00000014834snrpd210098.305Cyprinodon_variegatus
ENSSFOG00015016069-9998.291ENSCVAG00000010204SNRPD29798.291Cyprinodon_variegatus
ENSSFOG00015016069-10099.153ENSDARG00000040440snrpd210099.153Danio_rerio
ENSSFOG00015016069-99100.000ENSDNOG00000002365-92100.000Dasypus_novemcinctus
ENSSFOG00015016069-100100.000ENSDORG00000001729Snrpd2100100.000Dipodomys_ordii
ENSSFOG00015016069-9788.034FBgn0261789SmD29888.034Drosophila_melanogaster
ENSSFOG00015016069-10081.356ENSETEG00000002893-10077.966Echinops_telfairi
ENSSFOG00015016069-9993.162ENSEBUG00000002144snrpd29793.966Eptatretus_burgeri
ENSSFOG00015016069-100100.000ENSEASG00005014210-100100.000Equus_asinus_asinus
ENSSFOG00015016069-9973.729ENSEASG00005016910-8969.492Equus_asinus_asinus
ENSSFOG00015016069-93100.000ENSECAG00000007824SNRPD296100.000Equus_caballus
ENSSFOG00015016069-9998.291ENSELUG00000020393snrpd26698.291Esox_lucius
ENSSFOG00015016069-100100.000ENSFCAG00000022530-100100.000Felis_catus
ENSSFOG00015016069-9188.785ENSFCAG00000024879-6989.623Felis_catus
ENSSFOG00015016069-100100.000ENSFDAG00000015792SNRPD2100100.000Fukomys_damarensis
ENSSFOG00015016069-10098.305ENSFHEG00000015591snrpd210098.305Fundulus_heteroclitus
ENSSFOG00015016069-9998.291ENSGMOG00000013857snrpd29998.291Gadus_morhua
ENSSFOG00015016069-10098.305ENSGAFG00000001246snrpd210098.305Gambusia_affinis
ENSSFOG00015016069-9996.581ENSGACG00000006697snrpd29996.581Gasterosteus_aculeatus
ENSSFOG00015016069-70100.000ENSGAGG00000017944SNRPD258100.000Gopherus_agassizii
ENSSFOG00015016069-100100.000ENSGGOG00000002350SNRPD2100100.000Gorilla_gorilla
ENSSFOG00015016069-10098.305ENSHBUG00000004073snrpd210098.305Haplochromis_burtoni
ENSSFOG00015016069-10080.508ENSHGLG00000017154-10080.508Heterocephalus_glaber_female
ENSSFOG00015016069-100100.000ENSHGLG00000015364SNRPD2100100.000Heterocephalus_glaber_female
ENSSFOG00015016069-100100.000ENSHGLG00100015694SNRPD2100100.000Heterocephalus_glaber_male
ENSSFOG00015016069-10093.220ENSHGLG00100020606-6493.220Heterocephalus_glaber_male
ENSSFOG00015016069-10097.458ENSHCOG00000010973snrpd210097.458Hippocampus_comes
ENSSFOG00015016069-100100.000ENSIPUG00000001053snrpd2100100.000Ictalurus_punctatus
ENSSFOG00015016069-100100.000ENSSTOG00000024377SNRPD2100100.000Ictidomys_tridecemlineatus
ENSSFOG00015016069-100100.000ENSJJAG00000002622Snrpd2100100.000Jaculus_jaculus
ENSSFOG00015016069-10098.305ENSKMAG00000001539snrpd210098.305Kryptolebias_marmoratus
ENSSFOG00015016069-10097.458ENSLBEG00000019436snrpd210097.458Labrus_bergylta
ENSSFOG00015016069-9299.074ENSLACG00000004720SNRPD210099.074Latimeria_chalumnae
ENSSFOG00015016069-10099.153ENSLOCG00000014824snrpd210099.153Lepisosteus_oculatus
ENSSFOG00015016069-99100.000ENSLAFG00000004205-99100.000Loxodonta_africana
ENSSFOG00015016069-100100.000ENSMFAG00000045767-100100.000Macaca_fascicularis
ENSSFOG00015016069-10099.153ENSMFAG00000020148-10099.153Macaca_fascicularis
ENSSFOG00015016069-10097.458ENSMFAG00000009957-10097.458Macaca_fascicularis
ENSSFOG00015016069-10099.153ENSMMUG00000032370-10099.153Macaca_mulatta
ENSSFOG00015016069-9891.379ENSMMUG00000030518-9891.379Macaca_mulatta
ENSSFOG00015016069-10097.458ENSMMUG00000032525-10097.458Macaca_mulatta
ENSSFOG00015016069-9885.345ENSMNEG00000039787-8190.526Macaca_nemestrina
ENSSFOG00015016069-10098.305ENSMNEG00000021599-10098.305Macaca_nemestrina
ENSSFOG00015016069-10096.610ENSMNEG00000010649-10096.610Macaca_nemestrina
ENSSFOG00015016069-10097.458ENSMLEG00000008325-10097.458Mandrillus_leucophaeus
ENSSFOG00015016069-10098.305ENSMAMG00000013925snrpd210098.305Mastacembelus_armatus
ENSSFOG00015016069-10098.305ENSMZEG00005013054snrpd210098.305Maylandia_zebra
ENSSFOG00015016069-100100.000ENSMAUG00000018849Snrpd2100100.000Mesocricetus_auratus
ENSSFOG00015016069-100100.000ENSMICG00000031545SNRPD2100100.000Microcebus_murinus
ENSSFOG00015016069-10092.373ENSMOCG00000017135-10092.373Microtus_ochrogaster
ENSSFOG00015016069-100100.000ENSMOCG00000017080Snrpd2100100.000Microtus_ochrogaster
ENSSFOG00015016069-10097.458ENSMMOG00000004936snrpd210097.458Mola_mola
ENSSFOG00015016069-99100.000ENSMODG00000021539-99100.000Monodelphis_domestica
ENSSFOG00015016069-10098.305ENSMALG00000010608snrpd210098.305Monopterus_albus
ENSSFOG00015016069-100100.000MGP_CAROLIEiJ_G0029275-100100.000Mus_caroli
ENSSFOG00015016069-10094.068MGP_CAROLIEiJ_G0018529-10094.068Mus_caroli
ENSSFOG00015016069-100100.000ENSMUSG00000040824Snrpd2100100.000Mus_musculus
ENSSFOG00015016069-100100.000MGP_PahariEiJ_G0021135-100100.000Mus_pahari
ENSSFOG00015016069-10088.136MGP_SPRETEiJ_G0019409-10087.288Mus_spretus
ENSSFOG00015016069-100100.000MGP_SPRETEiJ_G0030359Snrpd2100100.000Mus_spretus
ENSSFOG00015016069-99100.000ENSMPUG00000005733-97100.000Mustela_putorius_furo
ENSSFOG00015016069-10094.915ENSMLUG00000025417-10094.915Myotis_lucifugus
ENSSFOG00015016069-9292.661ENSMLUG00000030461-9392.661Myotis_lucifugus
ENSSFOG00015016069-9982.906ENSMLUG00000026025-9982.906Myotis_lucifugus
ENSSFOG00015016069-9497.297ENSMLUG00000026353-9297.297Myotis_lucifugus
ENSSFOG00015016069-99100.000ENSMLUG00000001306-100100.000Myotis_lucifugus
ENSSFOG00015016069-8987.619ENSNGAG00000013160-6881.905Nannospalax_galili
ENSSFOG00015016069-100100.000ENSNGAG00000010411-100100.000Nannospalax_galili
ENSSFOG00015016069-10098.305ENSNBRG00000000805snrpd210098.305Neolamprologus_brichardi
ENSSFOG00015016069-100100.000ENSNLEG00000002274SNRPD2100100.000Nomascus_leucogenys
ENSSFOG00015016069-99100.000ENSMEUG00000012031-100100.000Notamacropus_eugenii
ENSSFOG00015016069-10099.153ENSOPRG00000008321-10099.153Ochotona_princeps
ENSSFOG00015016069-10097.458ENSODEG00000020094-10097.458Octodon_degus
ENSSFOG00015016069-10098.305ENSODEG00000020096-10098.305Octodon_degus
ENSSFOG00015016069-5396.774ENSODEG00000008077-8396.774Octodon_degus
ENSSFOG00015016069-100100.000ENSODEG00000008857-100100.000Octodon_degus
ENSSFOG00015016069-9998.291ENSODEG00000012799-9598.291Octodon_degus
ENSSFOG00015016069-5698.485ENSODEG00000011751-6298.485Octodon_degus
ENSSFOG00015016069-10098.305ENSODEG00000019447-10098.305Octodon_degus
ENSSFOG00015016069-100100.000ENSODEG00000020139-100100.000Octodon_degus
ENSSFOG00015016069-10098.305ENSONIG00000005406snrpd210098.305Oreochromis_niloticus
ENSSFOG00015016069-99100.000ENSOANG00000000813-95100.000Ornithorhynchus_anatinus
ENSSFOG00015016069-100100.000ENSOCUG00000022402SNRPD2100100.000Oryctolagus_cuniculus
ENSSFOG00015016069-10098.305ENSORLG00000026725snrpd210098.305Oryzias_latipes
ENSSFOG00015016069-10098.305ENSORLG00020011312snrpd210098.305Oryzias_latipes_hni
ENSSFOG00015016069-10098.305ENSORLG00015019579snrpd210098.305Oryzias_latipes_hsok
ENSSFOG00015016069-10098.305ENSOMEG00000012661snrpd210099.074Oryzias_melastigma
ENSSFOG00015016069-99100.000ENSOGAG00000030128-100100.000Otolemur_garnettii
ENSSFOG00015016069-10097.458ENSOARG00000016742-10097.458Ovis_aries
ENSSFOG00015016069-99100.000ENSOARG00000010203-99100.000Ovis_aries
ENSSFOG00015016069-100100.000ENSPPAG00000038031SNRPD2100100.000Pan_paniscus
ENSSFOG00015016069-100100.000ENSPPRG00000012309SNRPD2100100.000Panthera_pardus
ENSSFOG00015016069-10080.488ENSPPRG00000000040-10074.797Panthera_pardus
ENSSFOG00015016069-8262.887ENSPTIG00000000935-6987.879Panthera_tigris_altaica
ENSSFOG00015016069-92100.000ENSPTIG00000006666-100100.000Panthera_tigris_altaica
ENSSFOG00015016069-100100.000ENSPTRG00000011162SNRPD2100100.000Pan_troglodytes
ENSSFOG00015016069-10098.305ENSPANG00000017743-10098.305Papio_anubis
ENSSFOG00015016069-100100.000ENSPANG00000008802-100100.000Papio_anubis
ENSSFOG00015016069-10099.153ENSPKIG00000001110snrpd210099.153Paramormyrops_kingsleyae
ENSSFOG00015016069-92100.000ENSPSIG00000015823-100100.000Pelodiscus_sinensis
ENSSFOG00015016069-9997.436ENSPMGG00000016148snrpd210097.436Periophthalmus_magnuspinnatus
ENSSFOG00015016069-10094.915ENSPEMG00000009398-10094.915Peromyscus_maniculatus_bairdii
ENSSFOG00015016069-99100.000ENSPEMG00000004117-98100.000Peromyscus_maniculatus_bairdii
ENSSFOG00015016069-100100.000ENSPCIG00000022986SNRPD2100100.000Phascolarctos_cinereus
ENSSFOG00015016069-10098.305ENSPFOG00000016809snrpd210098.305Poecilia_formosa
ENSSFOG00015016069-10098.305ENSPLAG00000010725snrpd210098.305Poecilia_latipinna
ENSSFOG00015016069-10098.305ENSPMEG00000000107snrpd210098.305Poecilia_mexicana
ENSSFOG00015016069-9599.107ENSPREG00000004078snrpd29799.107Poecilia_reticulata
ENSSFOG00015016069-100100.000ENSPPYG00000010129SNRPD2100100.000Pongo_abelii
ENSSFOG00015016069-100100.000ENSPCAG00000016818SNRPD2100100.000Procavia_capensis
ENSSFOG00015016069-100100.000ENSPCOG00000028811-100100.000Propithecus_coquereli
ENSSFOG00015016069-100100.000ENSPCOG00000001429-100100.000Propithecus_coquereli
ENSSFOG00015016069-99100.000ENSPVAG00000001345-100100.000Pteropus_vampyrus
ENSSFOG00015016069-10098.305ENSPNYG00000011826snrpd210098.305Pundamilia_nyererei
ENSSFOG00015016069-10099.153ENSPNAG00000025554snrpd210099.153Pygocentrus_nattereri
ENSSFOG00015016069-10097.458ENSRNOG00000048758Snrpd2l10097.458Rattus_norvegicus
ENSSFOG00015016069-100100.000ENSRNOG00000015844Snrpd2100100.000Rattus_norvegicus
ENSSFOG00015016069-10089.831ENSRBIG00000032406-10089.831Rhinopithecus_bieti
ENSSFOG00015016069-10077.966ENSRBIG00000032742-9582.143Rhinopithecus_bieti
ENSSFOG00015016069-100100.000ENSRBIG00000040969SNRPD2100100.000Rhinopithecus_bieti
ENSSFOG00015016069-100100.000ENSRROG00000034764SNRPD2100100.000Rhinopithecus_roxellana
ENSSFOG00015016069-10087.288ENSRROG00000030974-81100.000Rhinopithecus_roxellana
ENSSFOG00015016069-9552.679YLR275WSMD29652.212Saccharomyces_cerevisiae
ENSSFOG00015016069-100100.000ENSSBOG00000009827-100100.000Saimiri_boliviensis_boliviensis
ENSSFOG00015016069-100100.000ENSSBOG00000035164-100100.000Saimiri_boliviensis_boliviensis
ENSSFOG00015016069-10099.153ENSSBOG00000017764-10099.153Saimiri_boliviensis_boliviensis
ENSSFOG00015016069-10097.458ENSSBOG00000019992-8197.458Saimiri_boliviensis_boliviensis
ENSSFOG00015016069-9999.145ENSSHAG00000003772-9999.145Sarcophilus_harrisii
ENSSFOG00015016069-10097.458ENSSMAG00000003422snrpd210097.458Scophthalmus_maximus
ENSSFOG00015016069-10098.305ENSSDUG00000005519snrpd210098.305Seriola_dumerili
ENSSFOG00015016069-10098.305ENSSLDG00000009397snrpd210098.305Seriola_lalandi_dorsalis
ENSSFOG00015016069-99100.000ENSSARG00000009167-100100.000Sorex_araneus
ENSSFOG00015016069-10098.305ENSSPAG00000015767snrpd210098.305Stegastes_partitus
ENSSFOG00015016069-7967.347ENSSSCG00000040417-7573.333Sus_scrofa
ENSSFOG00015016069-100100.000ENSSSCG00000033500SNRPD2100100.000Sus_scrofa
ENSSFOG00015016069-10096.610ENSTRUG00000023014snrpd210096.610Takifugu_rubripes
ENSSFOG00015016069-8599.000ENSTNIG00000011736snrpd29299.000Tetraodon_nigroviridis
ENSSFOG00015016069-100100.000ENSTBEG00000001752SNRPD2100100.000Tupaia_belangeri
ENSSFOG00015016069-100100.000ENSTTRG00000014299-100100.000Tursiops_truncatus
ENSSFOG00015016069-100100.000ENSUAMG00000023173SNRPD2100100.000Ursus_americanus
ENSSFOG00015016069-7876.087ENSUAMG00000022454-6275.000Ursus_americanus
ENSSFOG00015016069-7876.087ENSUMAG00000001547-6275.000Ursus_maritimus
ENSSFOG00015016069-100100.000ENSUMAG00000023685-100100.000Ursus_maritimus
ENSSFOG00015016069-10091.525ENSVVUG00000016748-10091.525Vulpes_vulpes
ENSSFOG00015016069-93100.000ENSVVUG00000003181-98100.000Vulpes_vulpes
ENSSFOG00015016069-9999.145ENSXETG00000002173snrpd210099.145Xenopus_tropicalis
ENSSFOG00015016069-9998.291ENSXCOG00000001082snrpd29398.291Xiphophorus_couchianus
ENSSFOG00015016069-10098.305ENSXMAG00000001018snrpd210098.305Xiphophorus_maculatus

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