EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016115 (Gene tree)
Gene ID: 108934577
Gene Symbol: snai3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3239 bases
Position: chrKV411072.1:6910245-6913483
Accession: 108934577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025058	zf-C2H2	PF00096.26	4.4e-20	1	4
ENSSFOP00015025058	zf-C2H2	PF00096.26	4.4e-20	2	4
ENSSFOP00015025058	zf-C2H2	PF00096.26	4.4e-20	3	4
ENSSFOP00015025058	zf-C2H2	PF00096.26	4.4e-20	4	4
ENSSFOP00015025058	zf-met	PF12874.7	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025332	-	1531	XM_018752492	ENSSFOP00015025058	323 (aa)	XP_018608008	A0A1W5A407

Gene Model

Click here to download ENSSFOG00015016115's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016115	snai3	50	36.496	ENSSFOG00015003121	znf668	78	36.496
ENSSFOG00015016115	snai3	93	52.632	ENSSFOG00015018025	SNAI2	99	51.768
ENSSFOG00015016115	snai3	52	39.744	ENSSFOG00015020993	-	78	40.260
ENSSFOG00015016115	snai3	77	42.647	ENSSFOG00015015878	-	89	42.647
ENSSFOG00015016115	snai3	50	39.623	ENSSFOG00015008577	-	95	39.623
ENSSFOG00015016115	snai3	52	39.130	ENSSFOG00015006108	-	58	39.130
ENSSFOG00015016115	snai3	54	41.346	ENSSFOG00015010829	-	72	41.346
ENSSFOG00015016115	snai3	85	33.571	ENSSFOG00015013930	PRDM15	53	33.571
ENSSFOG00015016115	snai3	52	38.750	ENSSFOG00015019818	-	79	39.806
ENSSFOG00015016115	snai3	72	38.667	ENSSFOG00015021699	si:ch211-166g5.4	68	38.667
ENSSFOG00015016115	snai3	74	48.649	ENSSFOG00015008994	znf236	57	48.649
ENSSFOG00015016115	snai3	67	39.623	ENSSFOG00015013448	-	95	39.623
ENSSFOG00015016115	snai3	68	39.423	ENSSFOG00015000652	ZNF775	85	39.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016115	snai3	93	46.405	ENSG00000185669	SNAI3	99	46.078	Homo_sapiens
ENSSFOG00015016115	snai3	93	50.325	ENSG00000019549	SNAI2	99	50.327	Homo_sapiens
ENSSFOG00015016115	snai3	93	50.331	ENSAMEG00000009606	SNAI2	99	48.693	Ailuropoda_melanoleuca
ENSSFOG00015016115	snai3	93	45.625	ENSANAG00000032748	SNAI3	99	46.078	Aotus_nancymaae
ENSSFOG00015016115	snai3	93	50.000	ENSANAG00000021163	SNAI2	99	50.327	Aotus_nancymaae
ENSSFOG00015016115	snai3	93	51.815	ENSBTAG00000013227	SNAI2	99	51.299	Bos_taurus
ENSSFOG00015016115	snai3	93	45.928	ENSBTAG00000017528	SNAI3	99	43.831	Bos_taurus
ENSSFOG00015016115	snai3	93	50.325	ENSCJAG00000013499	SNAI2	99	50.327	Callithrix_jacchus
ENSSFOG00015016115	snai3	93	50.000	ENSCAFG00000006638	SNAI2	99	49.346	Canis_familiaris
ENSSFOG00015016115	snai3	93	46.512	ENSCAFG00000029458	SNAI3	99	45.079	Canis_familiaris
ENSSFOG00015016115	snai3	93	50.000	ENSCAFG00020015384	SNAI2	99	49.346	Canis_lupus_dingo
ENSSFOG00015016115	snai3	93	46.844	ENSCAFG00020004719	SNAI3	99	45.397	Canis_lupus_dingo
ENSSFOG00015016115	snai3	93	46.078	ENSCHIG00000018087	SNAI3	99	46.006	Capra_hircus
ENSSFOG00015016115	snai3	93	52.145	ENSCHIG00000024410	SNAI2	99	51.623	Capra_hircus
ENSSFOG00015016115	snai3	93	50.325	ENSCCAG00000024100	SNAI2	99	50.327	Cebus_capucinus
ENSSFOG00015016115	snai3	93	46.580	ENSCATG00000031714	SNAI3	99	45.752	Cercocebus_atys
ENSSFOG00015016115	snai3	93	50.325	ENSCATG00000028656	SNAI2	99	50.327	Cercocebus_atys
ENSSFOG00015016115	snai3	93	50.331	ENSCLAG00000011797	SNAI2	99	48.693	Chinchilla_lanigera
ENSSFOG00015016115	snai3	93	50.325	ENSCSAG00000014787	SNAI2	99	50.327	Chlorocebus_sabaeus
ENSSFOG00015016115	snai3	51	65.294	ENSCSAG00000003047	SNAI3	57	65.680	Chlorocebus_sabaeus
ENSSFOG00015016115	snai3	93	50.662	ENSCPBG00000020255	SNAI2	99	50.825	Chrysemys_picta_bellii
ENSSFOG00015016115	snai3	93	49.682	ENSCPBG00000023474	SNAI3	99	49.355	Chrysemys_picta_bellii
ENSSFOG00015016115	snai3	93	50.325	ENSCANG00000029656	SNAI2	99	50.327	Colobus_angolensis_palliatus
ENSSFOG00015016115	snai3	51	66.061	ENSCANG00000031124	SNAI3	51	66.061	Colobus_angolensis_palliatus
ENSSFOG00015016115	snai3	93	47.231	ENSCGRG00001011389	Snai3	99	47.231	Cricetulus_griseus_chok1gshd
ENSSFOG00015016115	snai3	93	50.325	ENSCGRG00001013674	Snai2	99	48.693	Cricetulus_griseus_chok1gshd
ENSSFOG00015016115	snai3	93	47.231	ENSCGRG00000014932	Snai3	99	47.231	Cricetulus_griseus_crigri
ENSSFOG00015016115	snai3	93	50.325	ENSCGRG00000012119	Snai2	99	48.693	Cricetulus_griseus_crigri
ENSSFOG00015016115	snai3	76	34.959	ENSDNOG00000035204	-	100	35.772	Dasypus_novemcinctus
ENSSFOG00015016115	snai3	93	49.834	ENSDORG00000029620	Snai2	99	49.351	Dipodomys_ordii
ENSSFOG00015016115	snai3	51	68.485	ENSEASG00005000614	SNAI3	61	63.043	Equus_asinus_asinus
ENSSFOG00015016115	snai3	93	47.020	ENSECAG00000012131	SNAI3	99	50.000	Equus_caballus
ENSSFOG00015016115	snai3	93	41.694	ENSEEUG00000000841	SNAI3	99	40.000	Erinaceus_europaeus
ENSSFOG00015016115	snai3	93	58.958	ENSELUG00000018742	-	99	58.900	Esox_lucius
ENSSFOG00015016115	snai3	93	50.166	ENSELUG00000021795	SNAI2	78	51.163	Esox_lucius
ENSSFOG00015016115	snai3	93	43.750	ENSFCAG00000043885	SNAI3	99	42.904	Felis_catus
ENSSFOG00015016115	snai3	93	50.000	ENSFDAG00000016958	SNAI2	99	48.693	Fukomys_damarensis
ENSSFOG00015016115	snai3	93	47.896	ENSGAGG00000023571	SNAI3	99	49.346	Gopherus_agassizii
ENSSFOG00015016115	snai3	93	50.662	ENSGAGG00000000426	SNAI2	99	50.825	Gopherus_agassizii
ENSSFOG00015016115	snai3	93	46.203	ENSGGOG00000012559	SNAI3	99	45.752	Gorilla_gorilla
ENSSFOG00015016115	snai3	93	50.325	ENSGGOG00000000959	SNAI2	99	50.327	Gorilla_gorilla
ENSSFOG00015016115	snai3	93	50.329	ENSIPUG00000000131	snai2	99	50.809	Ictalurus_punctatus
ENSSFOG00015016115	snai3	93	49.834	ENSSTOG00000028743	SNAI2	99	48.366	Ictidomys_tridecemlineatus
ENSSFOG00015016115	snai3	93	46.006	ENSJJAG00000019934	Snai3	99	48.039	Jaculus_jaculus
ENSSFOG00015016115	snai3	93	50.980	ENSLOCG00000005992	SNAI2	99	50.820	Lepisosteus_oculatus
ENSSFOG00015016115	snai3	93	48.845	ENSLAFG00000005117	SNAI3	99	45.652	Loxodonta_africana
ENSSFOG00015016115	snai3	93	49.669	ENSLAFG00000009299	SNAI2	99	50.498	Loxodonta_africana
ENSSFOG00015016115	snai3	93	50.325	ENSMFAG00000046061	SNAI2	99	50.327	Macaca_fascicularis
ENSSFOG00015016115	snai3	93	46.580	ENSMFAG00000032064	SNAI3	99	45.752	Macaca_fascicularis
ENSSFOG00015016115	snai3	93	46.580	ENSMMUG00000008716	SNAI3	99	45.752	Macaca_mulatta
ENSSFOG00015016115	snai3	93	50.325	ENSMMUG00000016195	SNAI2	99	50.327	Macaca_mulatta
ENSSFOG00015016115	snai3	93	50.325	ENSMNEG00000034216	SNAI2	99	50.327	Macaca_nemestrina
ENSSFOG00015016115	snai3	93	46.580	ENSMNEG00000045515	SNAI3	99	45.752	Macaca_nemestrina
ENSSFOG00015016115	snai3	93	50.325	ENSMLEG00000034407	SNAI2	99	50.327	Mandrillus_leucophaeus
ENSSFOG00015016115	snai3	93	47.386	ENSMAUG00000001685	Snai3	99	47.386	Mesocricetus_auratus
ENSSFOG00015016115	snai3	93	50.649	ENSMAUG00000008119	Snai2	99	50.649	Mesocricetus_auratus
ENSSFOG00015016115	snai3	93	47.525	ENSMOCG00000003536	Snai3	99	46.689	Microtus_ochrogaster
ENSSFOG00015016115	snai3	93	50.325	ENSMOCG00000006622	Snai2	99	48.366	Microtus_ochrogaster
ENSSFOG00015016115	snai3	93	51.495	ENSMODG00000010173	SNAI2	99	50.658	Monodelphis_domestica
ENSSFOG00015016115	snai3	93	46.254	MGP_CAROLIEiJ_G0031662	Snai3	99	44.444	Mus_caroli
ENSSFOG00015016115	snai3	93	49.673	MGP_CAROLIEiJ_G0020483	Snai2	99	49.186	Mus_caroli
ENSSFOG00015016115	snai3	93	50.327	ENSMUSG00000022676	Snai2	99	49.511	Mus_musculus
ENSSFOG00015016115	snai3	93	46.580	ENSMUSG00000006587	Snai3	99	44.444	Mus_musculus
ENSSFOG00015016115	snai3	93	47.386	MGP_PahariEiJ_G0023260	Snai3	99	45.130	Mus_pahari
ENSSFOG00015016115	snai3	93	49.673	MGP_PahariEiJ_G0016188	Snai2	99	49.186	Mus_pahari
ENSSFOG00015016115	snai3	93	46.580	MGP_SPRETEiJ_G0032780	Snai3	99	44.444	Mus_spretus
ENSSFOG00015016115	snai3	93	50.327	MGP_SPRETEiJ_G0021379	Snai2	99	49.511	Mus_spretus
ENSSFOG00015016115	snai3	93	45.928	ENSMPUG00000008104	SNAI3	99	45.860	Mustela_putorius_furo
ENSSFOG00015016115	snai3	93	50.331	ENSMPUG00000010793	SNAI2	99	48.693	Mustela_putorius_furo
ENSSFOG00015016115	snai3	93	50.327	ENSMLUG00000001086	SNAI2	99	49.346	Myotis_lucifugus
ENSSFOG00015016115	snai3	93	45.695	ENSNGAG00000023039	Snai3	99	45.364	Nannospalax_galili
ENSSFOG00015016115	snai3	93	50.649	ENSNLEG00000013421	SNAI2	99	50.325	Nomascus_leucogenys
ENSSFOG00015016115	snai3	93	46.732	ENSNLEG00000000595	SNAI3	99	46.405	Nomascus_leucogenys
ENSSFOG00015016115	snai3	92	51.515	ENSMEUG00000009510	SNAI2	100	50.505	Notamacropus_eugenii
ENSSFOG00015016115	snai3	93	50.831	ENSOANG00000007267	SNAI2	99	50.831	Ornithorhynchus_anatinus
ENSSFOG00015016115	snai3	93	47.508	ENSOGAG00000000419	SNAI3	99	46.732	Otolemur_garnettii
ENSSFOG00015016115	snai3	93	52.145	ENSOARG00000013030	SNAI2	99	51.623	Ovis_aries
ENSSFOG00015016115	snai3	93	46.405	ENSPPAG00000043301	SNAI3	99	46.078	Pan_paniscus
ENSSFOG00015016115	snai3	93	50.325	ENSPPAG00000015662	SNAI2	99	50.327	Pan_paniscus
ENSSFOG00015016115	snai3	93	50.495	ENSPPRG00000012562	-	99	48.693	Panthera_pardus
ENSSFOG00015016115	snai3	93	45.066	ENSPPRG00000008511	SNAI3	99	45.066	Panthera_pardus
ENSSFOG00015016115	snai3	93	50.325	ENSPTRG00000020235	SNAI2	99	50.327	Pan_troglodytes
ENSSFOG00015016115	snai3	93	46.405	ENSPTRG00000008460	SNAI3	99	46.078	Pan_troglodytes
ENSSFOG00015016115	snai3	93	46.580	ENSPANG00000000509	SNAI3	99	45.752	Papio_anubis
ENSSFOG00015016115	snai3	93	50.325	ENSPANG00000017540	SNAI2	99	50.327	Papio_anubis
ENSSFOG00015016115	snai3	93	67.550	ENSPKIG00000007872	SNAI3	99	67.219	Paramormyrops_kingsleyae
ENSSFOG00015016115	snai3	93	51.495	ENSPKIG00000002254	SNAI2	99	50.498	Paramormyrops_kingsleyae
ENSSFOG00015016115	snai3	93	50.662	ENSPSIG00000016395	SNAI2	99	50.825	Pelodiscus_sinensis
ENSSFOG00015016115	snai3	93	50.993	ENSPMGG00000013179	SNAI2	99	51.656	Periophthalmus_magnuspinnatus
ENSSFOG00015016115	snai3	93	49.834	ENSPEMG00000011739	Snai2	99	48.366	Peromyscus_maniculatus_bairdii
ENSSFOG00015016115	snai3	93	51.495	ENSPCIG00000025156	SNAI2	99	50.820	Phascolarctos_cinereus
ENSSFOG00015016115	snai3	93	50.325	ENSPPYG00000018578	SNAI2	99	50.327	Pongo_abelii
ENSSFOG00015016115	snai3	93	46.405	ENSPPYG00000007643	SNAI3	99	46.429	Pongo_abelii
ENSSFOG00015016115	snai3	93	50.166	ENSPCOG00000015656	SNAI2	99	48.366	Propithecus_coquereli
ENSSFOG00015016115	snai3	93	50.649	ENSPVAG00000009457	SNAI2	99	48.693	Pteropus_vampyrus
ENSSFOG00015016115	snai3	93	46.452	ENSRNOG00000013586	Snai3	99	46.129	Rattus_norvegicus
ENSSFOG00015016115	snai3	93	46.254	ENSRBIG00000025770	SNAI3	99	45.425	Rhinopithecus_bieti
ENSSFOG00015016115	snai3	93	50.325	ENSRBIG00000041133	SNAI2	99	50.327	Rhinopithecus_bieti
ENSSFOG00015016115	snai3	93	46.535	ENSRROG00000032757	SNAI3	99	45.695	Rhinopithecus_roxellana
ENSSFOG00015016115	snai3	93	50.325	ENSRROG00000032273	SNAI2	99	50.327	Rhinopithecus_roxellana
ENSSFOG00015016115	snai3	93	50.325	ENSSBOG00000035774	SNAI2	99	50.327	Saimiri_boliviensis_boliviensis
ENSSFOG00015016115	snai3	93	51.495	ENSSHAG00000004205	SNAI2	99	50.820	Sarcophilus_harrisii
ENSSFOG00015016115	snai3	93	50.662	ENSSPUG00000005427	-	99	51.325	Sphenodon_punctatus
ENSSFOG00015016115	snai3	93	50.166	ENSSSCG00000039568	SNAI2	99	50.495	Sus_scrofa
ENSSFOG00015016115	snai3	93	45.215	ENSTTRG00000006262	SNAI3	99	46.026	Tursiops_truncatus
ENSSFOG00015016115	snai3	93	45.283	ENSUAMG00000020030	SNAI3	99	46.395	Ursus_americanus
ENSSFOG00015016115	snai3	91	49.158	ENSUMAG00000006525	SNAI2	99	47.508	Ursus_maritimus
ENSSFOG00015016115	snai3	93	49.673	ENSVVUG00000017625	SNAI2	99	49.020	Vulpes_vulpes
ENSSFOG00015016115	snai3	93	47.508	ENSVVUG00000003233	SNAI3	99	45.397	Vulpes_vulpes
ENSSFOG00015016115	snai3	93	52.159	ENSXETG00000024006	snai2	99	51.827	Xenopus_tropicalis