EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016149 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482 (1 of many)
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7212 bases
Position: chrKV411250.1:2713437-2720648
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025113	zf-met	PF12874.7	3.6e-16	1	2
ENSSFOP00015025113	zf-met	PF12874.7	3.6e-16	2	2
ENSSFOP00015025113	zf-C2H2_jaz	PF12171.8	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025389	-	375	-	ENSSFOP00015025113	124 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015016149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016149	zgc:171482	91	67.257	ENSSFOG00015015440	zmat4b	91	67.257
ENSSFOG00015016149	zgc:171482	88	76.471	ENSSFOG00015013158	zmat4	70	72.727
ENSSFOG00015016149	zgc:171482	98	84.426	ENSSFOG00015021238	zgc:171482	82	84.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016149	zgc:171482	94	89.744	ENSAPOG00000019970	zgc:171482	79	89.744	Acanthochromis_polyacanthus
ENSSFOG00015016149	zgc:171482	98	86.179	ENSACIG00000021512	zgc:171482	92	86.179	Amphilophus_citrinellus
ENSSFOG00015016149	zgc:171482	94	89.744	ENSAOCG00000000751	zgc:171482	86	89.744	Amphiprion_ocellaris
ENSSFOG00015016149	zgc:171482	98	83.721	ENSAPEG00000014154	zgc:171482	93	83.721	Amphiprion_percula
ENSSFOG00015016149	zgc:171482	90	89.381	ENSATEG00000001371	zgc:171482	79	88.034	Anabas_testudineus
ENSSFOG00015016149	zgc:171482	98	83.721	ENSACLG00000010511	zgc:171482	90	83.721	Astatotilapia_calliptera
ENSSFOG00015016149	zgc:171482	96	86.667	ENSAMXG00000002299	zgc:171482	91	86.667	Astyanax_mexicanus
ENSSFOG00015016149	zgc:171482	90	89.286	ENSCSEG00000006509	zgc:171482	73	89.286	Cynoglossus_semilaevis
ENSSFOG00015016149	zgc:171482	94	88.034	ENSCVAG00000013606	zgc:171482	80	88.034	Cyprinodon_variegatus
ENSSFOG00015016149	zgc:171482	98	86.885	ENSDARG00000074415	zgc:171482	90	88.333	Danio_rerio
ENSSFOG00015016149	zgc:171482	94	86.325	ENSELUG00000021817	zgc:171482	84	86.325	Esox_lucius
ENSSFOG00015016149	zgc:171482	94	68.908	ENSELUG00000017517	-	60	80.000	Esox_lucius
ENSSFOG00015016149	zgc:171482	96	85.833	ENSFHEG00000002233	zgc:171482	90	83.333	Fundulus_heteroclitus
ENSSFOG00015016149	zgc:171482	93	87.931	ENSGMOG00000010508	zgc:171482	79	87.931	Gadus_morhua
ENSSFOG00015016149	zgc:171482	94	88.889	ENSGAFG00000009398	zgc:171482	76	88.889	Gambusia_affinis
ENSSFOG00015016149	zgc:171482	94	88.889	ENSGACG00000007680	zgc:171482	80	88.889	Gasterosteus_aculeatus
ENSSFOG00015016149	zgc:171482	98	83.721	ENSHBUG00000023289	zgc:171482	97	83.721	Haplochromis_burtoni
ENSSFOG00015016149	zgc:171482	93	87.179	ENSHCOG00000018086	zgc:171482	87	87.179	Hippocampus_comes
ENSSFOG00015016149	zgc:171482	96	86.667	ENSIPUG00000000361	zgc:171482	87	86.667	Ictalurus_punctatus
ENSSFOG00015016149	zgc:171482	94	88.889	ENSKMAG00000005077	zgc:171482	68	88.889	Kryptolebias_marmoratus
ENSSFOG00015016149	zgc:171482	94	87.179	ENSLBEG00000023823	zgc:171482	84	87.179	Labrus_bergylta
ENSSFOG00015016149	zgc:171482	94	88.034	ENSLOCG00000008863	zgc:171482	77	88.034	Lepisosteus_oculatus
ENSSFOG00015016149	zgc:171482	94	88.034	ENSMAMG00000001031	zgc:171482	74	88.034	Mastacembelus_armatus
ENSSFOG00015016149	zgc:171482	94	86.207	ENSMZEG00005027721	zgc:171482	79	86.207	Maylandia_zebra
ENSSFOG00015016149	zgc:171482	94	88.889	ENSMMOG00000010523	zgc:171482	89	88.889	Mola_mola
ENSSFOG00015016149	zgc:171482	94	88.034	ENSMALG00000017883	zgc:171482	80	88.034	Monopterus_albus
ENSSFOG00015016149	zgc:171482	93	89.655	ENSNBRG00000021035	zgc:171482	87	89.655	Neolamprologus_brichardi
ENSSFOG00015016149	zgc:171482	94	88.889	ENSONIG00000018365	zgc:171482	78	88.889	Oreochromis_niloticus
ENSSFOG00015016149	zgc:171482	97	86.777	ENSORLG00000007607	zgc:171482	89	84.127	Oryzias_latipes
ENSSFOG00015016149	zgc:171482	97	85.833	ENSORLG00020003563	zgc:171482	89	83.333	Oryzias_latipes_hni
ENSSFOG00015016149	zgc:171482	97	86.777	ENSORLG00015008552	zgc:171482	89	84.127	Oryzias_latipes_hsok
ENSSFOG00015016149	zgc:171482	90	90.265	ENSOMEG00000003526	zgc:171482	80	90.265	Oryzias_melastigma
ENSSFOG00015016149	zgc:171482	97	87.603	ENSPKIG00000015911	-	84	87.603	Paramormyrops_kingsleyae
ENSSFOG00015016149	zgc:171482	88	90.826	ENSPKIG00000016244	zgc:171482	88	86.885	Paramormyrops_kingsleyae
ENSSFOG00015016149	zgc:171482	90	90.265	ENSPMGG00000020230	zgc:171482	82	90.265	Periophthalmus_magnuspinnatus
ENSSFOG00015016149	zgc:171482	93	88.793	ENSPLAG00000003327	zgc:171482	79	88.793	Poecilia_latipinna
ENSSFOG00015016149	zgc:171482	97	83.465	ENSPMEG00000004988	zgc:171482	77	83.465	Poecilia_mexicana
ENSSFOG00015016149	zgc:171482	93	88.793	ENSPREG00000019241	zgc:171482	84	88.793	Poecilia_reticulata
ENSSFOG00015016149	zgc:171482	98	83.721	ENSPNYG00000007773	zgc:171482	90	83.721	Pundamilia_nyererei
ENSSFOG00015016149	zgc:171482	91	87.719	ENSPNAG00000007619	zgc:171482	79	86.441	Pygocentrus_nattereri
ENSSFOG00015016149	zgc:171482	93	87.931	ENSSMAG00000002715	zgc:171482	74	87.931	Scophthalmus_maximus
ENSSFOG00015016149	zgc:171482	94	88.889	ENSSDUG00000008773	zgc:171482	82	88.889	Seriola_dumerili
ENSSFOG00015016149	zgc:171482	94	88.889	ENSSLDG00000019510	zgc:171482	82	88.889	Seriola_lalandi_dorsalis
ENSSFOG00015016149	zgc:171482	97	84.800	ENSSPAG00000013724	zgc:171482	99	84.800	Stegastes_partitus
ENSSFOG00015016149	zgc:171482	100	81.538	ENSTRUG00000005705	zgc:171482	77	81.538	Takifugu_rubripes
ENSSFOG00015016149	zgc:171482	90	67.257	ENSTNIG00000008679	zgc:171482	80	67.257	Tetraodon_nigroviridis
ENSSFOG00015016149	zgc:171482	83	80.769	ENSXETG00000013525	zmat4	80	80.769	Xenopus_tropicalis
ENSSFOG00015016149	zgc:171482	94	80.172	ENSXMAG00000002641	zgc:171482	76	80.172	Xiphophorus_maculatus