EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016187 (Gene tree)
Gene ID: 108935662
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 16152 bases
Position: chrKV411104.1:932649-948800
Accession: 108935662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025161	tRNA-synt_1g	PF09334.11	1.5e-15	1	1
ENSSFOP00015025161	Anticodon_1	PF08264.13	1.5e-35	1	1
ENSSFOP00015025161	tRNA-synt_1	PF00133.22	1.1e-192	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025439	-	3382	XM_018754446	ENSSFOP00015025161	1084 (aa)	XP_018609962	A0A1W5A276

Gene Model

Click here to download ENSSFOG00015016187's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016187	vars2	92	51.881	ENSSFOG00015014272	vars	82	51.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016187	vars2	95	68.648	ENSAPOG00000007396	vars2	97	68.281	Acanthochromis_polyacanthus
ENSSFOG00015016187	vars2	98	52.292	ENSAMEG00000012997	VARS2	93	53.230	Ailuropoda_melanoleuca
ENSSFOG00015016187	vars2	97	68.057	ENSACIG00000004344	vars2	98	68.451	Amphilophus_citrinellus
ENSSFOG00015016187	vars2	95	68.360	ENSAOCG00000000476	vars2	97	67.996	Amphiprion_ocellaris
ENSSFOG00015016187	vars2	95	68.456	ENSAPEG00000008646	vars2	95	68.091	Amphiprion_percula
ENSSFOG00015016187	vars2	95	70.999	ENSATEG00000012291	vars2	97	70.481	Anabas_testudineus
ENSSFOG00015016187	vars2	94	54.327	ENSACAG00000022093	VARS2	94	54.327	Anolis_carolinensis
ENSSFOG00015016187	vars2	97	51.834	ENSANAG00000038018	VARS2	96	52.381	Aotus_nancymaae
ENSSFOG00015016187	vars2	98	68.161	ENSACLG00000018673	vars2	98	68.780	Astatotilapia_calliptera
ENSSFOG00015016187	vars2	99	69.478	ENSAMXG00000017773	vars2	99	71.288	Astyanax_mexicanus
ENSSFOG00015016187	vars2	98	51.918	ENSBTAG00000010698	VARS2	96	52.381	Bos_taurus
ENSSFOG00015016187	vars2	96	51.947	ENSCJAG00000019826	VARS2	96	52.232	Callithrix_jacchus
ENSSFOG00015016187	vars2	98	52.470	ENSCAFG00000000454	VARS2	96	53.232	Canis_familiaris
ENSSFOG00015016187	vars2	85	57.174	ENSCAFG00020019387	VARS2	91	57.819	Canis_lupus_dingo
ENSSFOG00015016187	vars2	98	51.914	ENSCHIG00000007847	VARS2	96	52.476	Capra_hircus
ENSSFOG00015016187	vars2	97	52.345	ENSTSYG00000009904	VARS2	97	52.251	Carlito_syrichta
ENSSFOG00015016187	vars2	88	53.613	ENSCAPG00000017770	VARS2	99	53.725	Cavia_aperea
ENSSFOG00015016187	vars2	98	51.169	ENSCPOG00000021834	VARS2	96	51.951	Cavia_porcellus
ENSSFOG00015016187	vars2	98	51.354	ENSCCAG00000037907	VARS2	96	52.232	Cebus_capucinus
ENSSFOG00015016187	vars2	98	51.586	ENSCATG00000032554	VARS2	98	51.966	Cercocebus_atys
ENSSFOG00015016187	vars2	98	51.828	ENSCLAG00000002889	VARS2	96	52.286	Chinchilla_lanigera
ENSSFOG00015016187	vars2	98	51.772	ENSCSAG00000008327	VARS2	96	52.812	Chlorocebus_sabaeus
ENSSFOG00015016187	vars2	90	56.434	ENSCPBG00000021502	VARS2	96	56.434	Chrysemys_picta_bellii
ENSSFOG00015016187	vars2	98	51.399	ENSCANG00000014991	VARS2	97	51.679	Colobus_angolensis_palliatus
ENSSFOG00015016187	vars2	97	53.308	ENSCGRG00001021535	Vars2	97	53.308	Cricetulus_griseus_chok1gshd
ENSSFOG00015016187	vars2	97	53.308	ENSCGRG00000014112	Vars2	97	53.308	Cricetulus_griseus_crigri
ENSSFOG00015016187	vars2	90	71.264	ENSCSEG00000015432	vars2	91	80.000	Cynoglossus_semilaevis
ENSSFOG00015016187	vars2	65	69.350	ENSCVAG00000017765	vars2	98	69.350	Cyprinodon_variegatus
ENSSFOG00015016187	vars2	95	71.498	ENSDARG00000056717	vars2	96	71.498	Danio_rerio
ENSSFOG00015016187	vars2	79	52.083	ENSDORG00000008516	Vars2	93	52.083	Dipodomys_ordii
ENSSFOG00015016187	vars2	98	45.802	ENSETEG00000014844	VARS2	95	46.635	Echinops_telfairi
ENSSFOG00015016187	vars2	98	52.582	ENSEASG00005019997	VARS2	95	57.075	Equus_asinus_asinus
ENSSFOG00015016187	vars2	98	52.947	ENSECAG00000018202	VARS2	96	53.765	Equus_caballus
ENSSFOG00015016187	vars2	63	56.311	ENSEEUG00000012591	-	63	56.311	Erinaceus_europaeus
ENSSFOG00015016187	vars2	99	68.517	ENSELUG00000017824	vars2	100	68.517	Esox_lucius
ENSSFOG00015016187	vars2	98	53.035	ENSFCAG00000010531	VARS2	96	53.714	Felis_catus
ENSSFOG00015016187	vars2	98	52.676	ENSFDAG00000017216	VARS2	98	52.676	Fukomys_damarensis
ENSSFOG00015016187	vars2	90	65.416	ENSFHEG00000013932	vars2	95	65.811	Fundulus_heteroclitus
ENSSFOG00015016187	vars2	90	68.756	ENSGMOG00000018960	vars2	100	68.756	Gadus_morhua
ENSSFOG00015016187	vars2	89	65.614	ENSGAFG00000004737	vars2	97	65.614	Gambusia_affinis
ENSSFOG00015016187	vars2	93	69.254	ENSGACG00000001464	vars2	100	69.254	Gasterosteus_aculeatus
ENSSFOG00015016187	vars2	90	56.940	ENSGAGG00000011652	VARS2	98	56.940	Gopherus_agassizii
ENSSFOG00015016187	vars2	98	51.213	ENSGGOG00000014587	VARS2	98	51.493	Gorilla_gorilla
ENSSFOG00015016187	vars2	97	66.011	ENSHBUG00000002448	vars2	98	66.603	Haplochromis_burtoni
ENSSFOG00015016187	vars2	98	52.243	ENSHGLG00000012886	VARS2	92	53.558	Heterocephalus_glaber_female
ENSSFOG00015016187	vars2	98	52.247	ENSHGLG00100016535	VARS2	96	53.194	Heterocephalus_glaber_male
ENSSFOG00015016187	vars2	67	67.623	ENSHCOG00000017907	vars2	97	67.623	Hippocampus_comes
ENSSFOG00015016187	vars2	93	72.682	ENSIPUG00000015573	Vars2	95	72.098	Ictalurus_punctatus
ENSSFOG00015016187	vars2	96	52.327	ENSSTOG00000009924	VARS2	96	52.517	Ictidomys_tridecemlineatus
ENSSFOG00015016187	vars2	98	51.268	ENSJJAG00000011144	Vars2	96	52.011	Jaculus_jaculus
ENSSFOG00015016187	vars2	99	65.806	ENSKMAG00000001393	vars2	97	67.391	Kryptolebias_marmoratus
ENSSFOG00015016187	vars2	51	77.495	ENSLBEG00000005480	-	81	77.495	Labrus_bergylta
ENSSFOG00015016187	vars2	99	66.328	ENSLBEG00000011949	vars2	99	66.328	Labrus_bergylta
ENSSFOG00015016187	vars2	95	54.021	ENSLACG00000001576	-	100	54.115	Latimeria_chalumnae
ENSSFOG00015016187	vars2	98	51.907	ENSLAFG00000015183	VARS2	97	52.372	Loxodonta_africana
ENSSFOG00015016187	vars2	98	51.404	ENSMFAG00000042367	VARS2	96	52.336	Macaca_fascicularis
ENSSFOG00015016187	vars2	98	51.498	ENSMMUG00000018609	VARS2	96	52.431	Macaca_mulatta
ENSSFOG00015016187	vars2	98	51.493	ENSMNEG00000043163	VARS2	96	52.526	Macaca_nemestrina
ENSSFOG00015016187	vars2	98	51.679	ENSMLEG00000041728	VARS2	93	52.672	Mandrillus_leucophaeus
ENSSFOG00015016187	vars2	95	67.816	ENSMAMG00000020339	vars2	97	67.717	Mastacembelus_armatus
ENSSFOG00015016187	vars2	98	68.067	ENSMZEG00005017669	vars2	98	68.685	Maylandia_zebra
ENSSFOG00015016187	vars2	98	52.886	ENSMAUG00000018946	Vars2	96	53.321	Mesocricetus_auratus
ENSSFOG00015016187	vars2	81	57.015	ENSMICG00000005365	VARS2	95	58.053	Microcebus_murinus
ENSSFOG00015016187	vars2	90	59.975	ENSMOCG00000014607	Vars2	97	59.975	Microtus_ochrogaster
ENSSFOG00015016187	vars2	95	67.638	ENSMMOG00000012122	vars2	96	67.638	Mola_mola
ENSSFOG00015016187	vars2	93	52.465	ENSMODG00000015848	VARS2	96	51.277	Monodelphis_domestica
ENSSFOG00015016187	vars2	95	67.337	ENSMALG00000009217	vars2	100	68.353	Monopterus_albus
ENSSFOG00015016187	vars2	98	52.425	MGP_CAROLIEiJ_G0021529	Vars2	94	58.484	Mus_caroli
ENSSFOG00015016187	vars2	98	52.519	ENSMUSG00000038838	Vars2	93	58.484	Mus_musculus
ENSSFOG00015016187	vars2	98	52.656	MGP_PahariEiJ_G0020523	Vars2	96	57.168	Mus_pahari
ENSSFOG00015016187	vars2	98	52.332	MGP_SPRETEiJ_G0022436	Vars2	94	58.123	Mus_spretus
ENSSFOG00015016187	vars2	98	52.705	ENSMPUG00000011643	VARS2	96	53.466	Mustela_putorius_furo
ENSSFOG00015016187	vars2	95	53.098	ENSMLUG00000002356	VARS2	93	53.098	Myotis_lucifugus
ENSSFOG00015016187	vars2	97	48.253	ENSNGAG00000020607	Vars2	97	48.152	Nannospalax_galili
ENSSFOG00015016187	vars2	71	62.707	ENSNBRG00000001624	vars2	57	62.707	Neolamprologus_brichardi
ENSSFOG00015016187	vars2	94	51.167	ENSNLEG00000005625	VARS2	91	52.485	Nomascus_leucogenys
ENSSFOG00015016187	vars2	79	59.167	ENSMEUG00000014475	VARS2	89	59.167	Notamacropus_eugenii
ENSSFOG00015016187	vars2	85	55.978	ENSOPRG00000000682	VARS2	85	55.978	Ochotona_princeps
ENSSFOG00015016187	vars2	97	52.232	ENSODEG00000017965	VARS2	97	52.422	Octodon_degus
ENSSFOG00015016187	vars2	93	50.980	ENSONIG00000004734	vars2	100	50.980	Oreochromis_niloticus
ENSSFOG00015016187	vars2	72	44.797	ENSOANG00000000398	-	93	44.797	Ornithorhynchus_anatinus
ENSSFOG00015016187	vars2	96	48.295	ENSOCUG00000021496	VARS2	62	48.958	Oryctolagus_cuniculus
ENSSFOG00015016187	vars2	94	67.057	ENSORLG00000010632	vars2	96	66.380	Oryzias_latipes
ENSSFOG00015016187	vars2	93	67.192	ENSORLG00020018584	vars2	96	66.189	Oryzias_latipes_hni
ENSSFOG00015016187	vars2	93	67.387	ENSORLG00015010408	vars2	96	66.286	Oryzias_latipes_hsok
ENSSFOG00015016187	vars2	99	65.317	ENSOMEG00000008360	vars2	96	66.730	Oryzias_melastigma
ENSSFOG00015016187	vars2	95	53.359	ENSOGAG00000006087	VARS2	92	53.359	Otolemur_garnettii
ENSSFOG00015016187	vars2	98	51.776	ENSOARG00000010844	VARS2	95	52.236	Ovis_aries
ENSSFOG00015016187	vars2	98	51.679	ENSPPAG00000041141	VARS2	98	51.679	Pan_paniscus
ENSSFOG00015016187	vars2	98	53.035	ENSPPRG00000006751	VARS2	94	53.810	Panthera_pardus
ENSSFOG00015016187	vars2	98	52.941	ENSPTIG00000017799	VARS2	96	54.807	Panthera_tigris_altaica
ENSSFOG00015016187	vars2	98	51.679	ENSPTRG00000034497	VARS2	98	51.679	Pan_troglodytes
ENSSFOG00015016187	vars2	98	51.679	ENSPANG00000018481	VARS2	97	53.223	Papio_anubis
ENSSFOG00015016187	vars2	100	71.691	ENSPKIG00000011372	vars2	100	71.863	Paramormyrops_kingsleyae
ENSSFOG00015016187	vars2	58	64.375	ENSPSIG00000006206	VARS2	92	63.945	Pelodiscus_sinensis
ENSSFOG00015016187	vars2	96	67.302	ENSPMGG00000000465	vars2	97	67.207	Periophthalmus_magnuspinnatus
ENSSFOG00015016187	vars2	98	52.778	ENSPEMG00000014691	Vars2	97	53.046	Peromyscus_maniculatus_bairdii
ENSSFOG00015016187	vars2	96	53.435	ENSPCIG00000015040	VARS2	96	53.468	Phascolarctos_cinereus
ENSSFOG00015016187	vars2	94	66.438	ENSPFOG00000017616	vars2	96	65.643	Poecilia_formosa
ENSSFOG00015016187	vars2	94	66.536	ENSPLAG00000019778	vars2	97	65.742	Poecilia_latipinna
ENSSFOG00015016187	vars2	94	66.341	ENSPMEG00000011123	vars2	97	65.550	Poecilia_mexicana
ENSSFOG00015016187	vars2	94	59.202	ENSPREG00000014998	vars2	96	59.824	Poecilia_reticulata
ENSSFOG00015016187	vars2	98	51.493	ENSPPYG00000016424	VARS2	98	51.772	Pongo_abelii
ENSSFOG00015016187	vars2	65	55.500	ENSPCAG00000006946	VARS2	66	55.500	Procavia_capensis
ENSSFOG00015016187	vars2	98	50.046	ENSPCOG00000014839	VARS2	93	50.857	Propithecus_coquereli
ENSSFOG00015016187	vars2	95	52.783	ENSPVAG00000004197	VARS2	95	52.879	Pteropus_vampyrus
ENSSFOG00015016187	vars2	86	75.472	ENSPNYG00000010314	vars2	99	75.472	Pundamilia_nyererei
ENSSFOG00015016187	vars2	99	70.093	ENSPNAG00000026793	vars2	99	70.046	Pygocentrus_nattereri
ENSSFOG00015016187	vars2	98	52.519	ENSRNOG00000000833	Vars2	97	52.919	Rattus_norvegicus
ENSSFOG00015016187	vars2	98	51.772	ENSRBIG00000032725	VARS2	98	52.154	Rhinopithecus_bieti
ENSSFOG00015016187	vars2	98	51.586	ENSRROG00000043847	VARS2	98	51.966	Rhinopithecus_roxellana
ENSSFOG00015016187	vars2	98	50.320	ENSSBOG00000033240	VARS2	94	50.977	Saimiri_boliviensis_boliviensis
ENSSFOG00015016187	vars2	96	52.707	ENSSHAG00000009307	VARS2	97	52.707	Sarcophilus_harrisii
ENSSFOG00015016187	vars2	95	69.709	ENSSMAG00000020842	vars2	96	69.402	Scophthalmus_maximus
ENSSFOG00015016187	vars2	95	69.032	ENSSDUG00000011598	vars2	98	68.431	Seriola_dumerili
ENSSFOG00015016187	vars2	95	68.182	ENSSLDG00000015492	vars2	98	67.395	Seriola_lalandi_dorsalis
ENSSFOG00015016187	vars2	50	60.741	ENSSARG00000003786	-	61	60.741	Sorex_araneus
ENSSFOG00015016187	vars2	89	55.901	ENSSPUG00000014700	VARS2	95	55.901	Sphenodon_punctatus
ENSSFOG00015016187	vars2	99	65.463	ENSSPAG00000004654	vars2	100	64.815	Stegastes_partitus
ENSSFOG00015016187	vars2	98	52.345	ENSSSCG00000001384	VARS2	96	54.872	Sus_scrofa
ENSSFOG00015016187	vars2	93	67.292	ENSTRUG00000005264	vars2	96	67.160	Takifugu_rubripes
ENSSFOG00015016187	vars2	99	63.374	ENSTNIG00000005916	vars2	95	65.407	Tetraodon_nigroviridis
ENSSFOG00015016187	vars2	86	53.810	ENSTTRG00000012243	VARS2	84	57.068	Tursiops_truncatus
ENSSFOG00015016187	vars2	98	52.239	ENSUAMG00000026124	VARS2	99	54.237	Ursus_americanus
ENSSFOG00015016187	vars2	98	52.381	ENSUMAG00000019894	VARS2	96	52.964	Ursus_maritimus
ENSSFOG00015016187	vars2	99	52.258	ENSVVUG00000010754	VARS2	91	53.384	Vulpes_vulpes
ENSSFOG00015016187	vars2	88	53.125	ENSXETG00000003036	vars2	98	53.125	Xenopus_tropicalis
ENSSFOG00015016187	vars2	93	68.281	ENSXCOG00000003455	vars2	97	68.281	Xiphophorus_couchianus
ENSSFOG00015016187	vars2	96	67.368	ENSXMAG00000013523	vars2	97	67.304	Xiphophorus_maculatus