EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015016241 (Gene tree)
Gene ID: 108923419
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 42138 bases
Position: chrKV410824.1:2180140-2222277
Accession: 108923419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025225	SHQ1	PF04925.15	1.9e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025503	-	5313	XM_018734144	ENSSFOP00015025225	546 (aa)	XP_018589660	A0A1W4YMJ3

Gene Model

Click here to download ENSSFOG00015016241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016241	shq1	91	53.996	ENSG00000144736	SHQ1	100	70.000	Homo_sapiens
ENSSFOG00015016241	shq1	79	71.396	ENSAPOG00000000397	shq1	99	59.401	Acanthochromis_polyacanthus
ENSSFOG00015016241	shq1	91	53.929	ENSAMEG00000015140	SHQ1	76	62.529	Ailuropoda_melanoleuca
ENSSFOG00015016241	shq1	78	72.664	ENSACIG00000021249	shq1	99	59.396	Amphilophus_citrinellus
ENSSFOG00015016241	shq1	79	72.311	ENSAOCG00000023311	shq1	73	71.300	Amphiprion_ocellaris
ENSSFOG00015016241	shq1	99	60.133	ENSAPEG00000021686	shq1	99	60.133	Amphiprion_percula
ENSSFOG00015016241	shq1	78	74.126	ENSATEG00000008475	shq1	99	59.835	Anabas_testudineus
ENSSFOG00015016241	shq1	80	61.384	ENSAPLG00000013926	SHQ1	88	61.607	Anas_platyrhynchos
ENSSFOG00015016241	shq1	77	62.471	ENSACAG00000014809	SHQ1	67	60.976	Anolis_carolinensis
ENSSFOG00015016241	shq1	94	56.354	ENSANAG00000029241	SHQ1	77	63.311	Aotus_nancymaae
ENSSFOG00015016241	shq1	93	40.497	ENSANAG00000030500	-	74	46.279	Aotus_nancymaae
ENSSFOG00015016241	shq1	99	59.564	ENSACLG00000023077	shq1	99	56.640	Astatotilapia_calliptera
ENSSFOG00015016241	shq1	77	65.330	ENSAMXG00000043822	shq1	75	65.501	Astyanax_mexicanus
ENSSFOG00015016241	shq1	91	54.270	ENSBTAG00000005436	SHQ1	78	62.555	Bos_taurus
ENSSFOG00015016241	shq1	79	31.293	WBGene00021655	Y48A5A.1	99	31.757	Caenorhabditis_elegans
ENSSFOG00015016241	shq1	91	55.240	ENSCJAG00000015131	SHQ1	77	63.982	Callithrix_jacchus
ENSSFOG00015016241	shq1	91	53.860	ENSCAFG00000006434	SHQ1	77	62.416	Canis_familiaris
ENSSFOG00015016241	shq1	91	54.039	ENSCAFG00020016743	SHQ1	77	62.640	Canis_lupus_dingo
ENSSFOG00015016241	shq1	91	55.062	ENSCHIG00000012271	SHQ1	68	64.828	Capra_hircus
ENSSFOG00015016241	shq1	91	52.072	ENSTSYG00000014439	SHQ1	77	60.722	Carlito_syrichta
ENSSFOG00015016241	shq1	82	49.489	ENSCAPG00000009343	SHQ1	94	59.091	Cavia_aperea
ENSSFOG00015016241	shq1	80	62.921	ENSCPOG00000011443	SHQ1	76	62.921	Cavia_porcellus
ENSSFOG00015016241	shq1	85	47.660	ENSCCAG00000036087	-	75	48.624	Cebus_capucinus
ENSSFOG00015016241	shq1	91	47.415	ENSCCAG00000027080	SHQ1	75	54.586	Cebus_capucinus
ENSSFOG00015016241	shq1	91	55.062	ENSCATG00000041238	SHQ1	77	63.982	Cercocebus_atys
ENSSFOG00015016241	shq1	80	62.332	ENSCLAG00000004206	SHQ1	77	62.332	Chinchilla_lanigera
ENSSFOG00015016241	shq1	75	52.110	ENSCSAG00000011514	SHQ1	73	62.291	Chlorocebus_sabaeus
ENSSFOG00015016241	shq1	61	51.744	ENSCHOG00000003273	-	84	66.667	Choloepus_hoffmanni
ENSSFOG00015016241	shq1	80	63.393	ENSCPBG00000006441	SHQ1	73	63.393	Chrysemys_picta_bellii
ENSSFOG00015016241	shq1	71	42.347	ENSCING00000008013	-	95	40.835	Ciona_intestinalis
ENSSFOG00015016241	shq1	71	41.753	ENSCSAVG00000002332	-	99	40.596	Ciona_savignyi
ENSSFOG00015016241	shq1	91	55.240	ENSCANG00000039295	SHQ1	77	63.758	Colobus_angolensis_palliatus
ENSSFOG00015016241	shq1	78	62.299	ENSCGRG00001012583	Shq1	67	72.500	Cricetulus_griseus_chok1gshd
ENSSFOG00015016241	shq1	78	62.299	ENSCGRG00000009849	Shq1	67	72.500	Cricetulus_griseus_crigri
ENSSFOG00015016241	shq1	75	72.372	ENSCSEG00000007829	shq1	99	58.987	Cynoglossus_semilaevis
ENSSFOG00015016241	shq1	78	68.224	ENSCVAG00000020049	shq1	99	56.559	Cyprinodon_variegatus
ENSSFOG00015016241	shq1	99	60.284	ENSDARG00000058522	shq1	97	60.351	Danio_rerio
ENSSFOG00015016241	shq1	91	55.235	ENSDNOG00000033937	SHQ1	96	54.693	Dasypus_novemcinctus
ENSSFOG00015016241	shq1	80	54.586	ENSETEG00000005766	SHQ1	77	54.586	Echinops_telfairi
ENSSFOG00015016241	shq1	68	47.059	ENSEBUG00000005445	shq1	78	48.837	Eptatretus_burgeri
ENSSFOG00015016241	shq1	90	55.357	ENSEASG00005002237	SHQ1	77	63.982	Equus_asinus_asinus
ENSSFOG00015016241	shq1	90	55.357	ENSECAG00000015673	SHQ1	75	63.982	Equus_caballus
ENSSFOG00015016241	shq1	81	62.528	ENSEEUG00000010568	SHQ1	96	55.435	Erinaceus_europaeus
ENSSFOG00015016241	shq1	74	75.062	ENSELUG00000003476	shq1	98	61.395	Esox_lucius
ENSSFOG00015016241	shq1	80	65.101	ENSFALG00000013428	SHQ1	73	65.101	Ficedula_albicollis
ENSSFOG00015016241	shq1	80	62.108	ENSFDAG00000005595	SHQ1	69	61.883	Fukomys_damarensis
ENSSFOG00015016241	shq1	78	66.820	ENSFHEG00000017552	shq1	99	54.746	Fundulus_heteroclitus
ENSSFOG00015016241	shq1	71	69.072	ENSGMOG00000007350	shq1	100	69.330	Gadus_morhua
ENSSFOG00015016241	shq1	80	62.780	ENSGALG00000007798	SHQ1	73	63.004	Gallus_gallus
ENSSFOG00015016241	shq1	71	70.543	ENSGACG00000011797	shq1	100	71.059	Gasterosteus_aculeatus
ENSSFOG00015016241	shq1	91	53.819	ENSGGOG00000034818	SHQ1	77	62.416	Gorilla_gorilla
ENSSFOG00015016241	shq1	99	59.160	ENSHBUG00000010857	shq1	99	58.992	Haplochromis_burtoni
ENSSFOG00015016241	shq1	78	62.329	ENSHGLG00000003637	SHQ1	68	62.329	Heterocephalus_glaber_female
ENSSFOG00015016241	shq1	78	62.329	ENSHGLG00100011957	SHQ1	68	62.329	Heterocephalus_glaber_male
ENSSFOG00015016241	shq1	99	57.363	ENSHCOG00000010799	shq1	99	56.604	Hippocampus_comes
ENSSFOG00015016241	shq1	90	62.549	ENSIPUG00000001247	shq1	88	62.083	Ictalurus_punctatus
ENSSFOG00015016241	shq1	90	55.263	ENSSTOG00000010043	SHQ1	82	61.915	Ictidomys_tridecemlineatus
ENSSFOG00015016241	shq1	79	62.273	ENSJJAG00000017611	Shq1	71	73.494	Jaculus_jaculus
ENSSFOG00015016241	shq1	100	56.975	ENSKMAG00000004457	shq1	99	57.432	Kryptolebias_marmoratus
ENSSFOG00015016241	shq1	78	66.207	ENSLACG00000014243	SHQ1	65	66.207	Latimeria_chalumnae
ENSSFOG00015016241	shq1	99	57.143	ENSLOCG00000009970	shq1	97	60.503	Lepisosteus_oculatus
ENSSFOG00015016241	shq1	91	55.240	ENSMFAG00000039148	SHQ1	77	63.982	Macaca_fascicularis
ENSSFOG00015016241	shq1	91	41.436	ENSMFAG00000037396	-	96	39.926	Macaca_fascicularis
ENSSFOG00015016241	shq1	83	53.398	ENSMMUG00000009571	SHQ1	72	62.657	Macaca_mulatta
ENSSFOG00015016241	shq1	91	41.436	ENSMMUG00000021761	-	96	39.926	Macaca_mulatta
ENSSFOG00015016241	shq1	91	55.240	ENSMNEG00000032667	SHQ1	77	63.982	Macaca_nemestrina
ENSSFOG00015016241	shq1	91	54.885	ENSMLEG00000038493	SHQ1	77	63.982	Mandrillus_leucophaeus
ENSSFOG00015016241	shq1	99	58.347	ENSMAMG00000023432	shq1	95	58.117	Mastacembelus_armatus
ENSSFOG00015016241	shq1	99	59.664	ENSMZEG00005008649	shq1	99	59.496	Maylandia_zebra
ENSSFOG00015016241	shq1	95	56.354	ENSMGAG00000009640	SHQ1	90	56.562	Meleagris_gallopavo
ENSSFOG00015016241	shq1	79	62.162	ENSMAUG00000022030	Shq1	79	62.162	Mesocricetus_auratus
ENSSFOG00015016241	shq1	91	53.451	ENSMICG00000009224	SHQ1	75	62.156	Microcebus_murinus
ENSSFOG00015016241	shq1	91	54.244	ENSMOCG00000017836	Shq1	78	62.557	Microtus_ochrogaster
ENSSFOG00015016241	shq1	99	57.770	ENSMMOG00000010569	shq1	99	58.603	Mola_mola
ENSSFOG00015016241	shq1	85	56.818	ENSMODG00000003926	SHQ1	80	60.090	Monodelphis_domestica
ENSSFOG00015016241	shq1	100	61.214	ENSMALG00000008870	shq1	99	60.877	Monopterus_albus
ENSSFOG00015016241	shq1	78	62.557	MGP_CAROLIEiJ_G0028689	Shq1	77	62.557	Mus_caroli
ENSSFOG00015016241	shq1	87	58.197	ENSMUSG00000035378	Shq1	77	62.100	Mus_musculus
ENSSFOG00015016241	shq1	87	58.932	MGP_SPRETEiJ_G0029717	Shq1	77	62.100	Mus_spretus
ENSSFOG00015016241	shq1	91	54.902	ENSMPUG00000017006	SHQ1	94	54.496	Mustela_putorius_furo
ENSSFOG00015016241	shq1	69	63.077	ENSMLUG00000013539	SHQ1	74	63.077	Myotis_lucifugus
ENSSFOG00015016241	shq1	91	50.551	ENSNGAG00000023317	Shq1	78	57.798	Nannospalax_galili
ENSSFOG00015016241	shq1	83	54.473	ENSNBRG00000024004	shq1	98	54.274	Neolamprologus_brichardi
ENSSFOG00015016241	shq1	91	54.707	ENSNLEG00000002731	SHQ1	77	62.864	Nomascus_leucogenys
ENSSFOG00015016241	shq1	68	57.407	ENSMEUG00000009350	-	70	57.407	Notamacropus_eugenii
ENSSFOG00015016241	shq1	94	54.396	ENSODEG00000009192	SHQ1	100	58.491	Octodon_degus
ENSSFOG00015016241	shq1	78	71.860	ENSONIG00000020264	shq1	99	59.228	Oreochromis_niloticus
ENSSFOG00015016241	shq1	90	54.011	ENSOCUG00000016695	SHQ1	74	63.448	Oryctolagus_cuniculus
ENSSFOG00015016241	shq1	74	71.921	ENSORLG00000023538	shq1	80	70.387	Oryzias_latipes
ENSSFOG00015016241	shq1	74	72.167	ENSORLG00020003697	shq1	79	70.615	Oryzias_latipes_hni
ENSSFOG00015016241	shq1	74	71.921	ENSORLG00015021040	shq1	78	71.729	Oryzias_latipes_hsok
ENSSFOG00015016241	shq1	77	71.395	ENSOMEG00000001225	shq1	80	70.455	Oryzias_melastigma
ENSSFOG00015016241	shq1	88	58.300	ENSOGAG00000003898	SHQ1	78	61.778	Otolemur_garnettii
ENSSFOG00015016241	shq1	94	54.359	ENSOARG00000009547	SHQ1	77	62.801	Ovis_aries
ENSSFOG00015016241	shq1	91	54.174	ENSPPAG00000027714	SHQ1	77	62.864	Pan_paniscus
ENSSFOG00015016241	shq1	88	45.082	ENSPPAG00000043263	-	75	45.928	Pan_paniscus
ENSSFOG00015016241	shq1	91	54.693	ENSPPRG00000004769	SHQ1	96	55.054	Panthera_pardus
ENSSFOG00015016241	shq1	91	51.913	ENSPTIG00000011478	SHQ1	96	52.823	Panthera_tigris_altaica
ENSSFOG00015016241	shq1	91	54.174	ENSPTRG00000015106	SHQ1	77	62.864	Pan_troglodytes
ENSSFOG00015016241	shq1	88	44.672	ENSPTRG00000048303	-	75	45.249	Pan_troglodytes
ENSSFOG00015016241	shq1	91	54.707	ENSPANG00000002881	SHQ1	77	64.430	Papio_anubis
ENSSFOG00015016241	shq1	99	62.632	ENSPKIG00000021517	shq1	98	62.632	Paramormyrops_kingsleyae
ENSSFOG00015016241	shq1	80	62.500	ENSPSIG00000005536	SHQ1	73	62.500	Pelodiscus_sinensis
ENSSFOG00015016241	shq1	99	53.638	ENSPMGG00000008838	shq1	75	65.986	Periophthalmus_magnuspinnatus
ENSSFOG00015016241	shq1	91	54.845	ENSPEMG00000000251	Shq1	78	62.108	Peromyscus_maniculatus_bairdii
ENSSFOG00015016241	shq1	78	58.124	ENSPMAG00000005372	shq1	98	58.124	Petromyzon_marinus
ENSSFOG00015016241	shq1	78	67.285	ENSPFOG00000003118	shq1	82	66.816	Poecilia_formosa
ENSSFOG00015016241	shq1	62	65.882	ENSPMEG00000011076	shq1	86	60.925	Poecilia_mexicana
ENSSFOG00015016241	shq1	66	66.667	ENSPREG00000000591	shq1	76	65.743	Poecilia_reticulata
ENSSFOG00015016241	shq1	91	54.707	ENSPPYG00000013717	SHQ1	77	63.087	Pongo_abelii
ENSSFOG00015016241	shq1	90	55.036	ENSPCAG00000009035	SHQ1	78	64.062	Procavia_capensis
ENSSFOG00015016241	shq1	80	61.333	ENSPCOG00000008415	SHQ1	77	61.778	Propithecus_coquereli
ENSSFOG00015016241	shq1	91	54.189	ENSPVAG00000017392	SHQ1	78	61.674	Pteropus_vampyrus
ENSSFOG00015016241	shq1	99	59.564	ENSPNYG00000003878	shq1	99	59.060	Pundamilia_nyererei
ENSSFOG00015016241	shq1	77	70.047	ENSPNAG00000026840	shq1	99	57.238	Pygocentrus_nattereri
ENSSFOG00015016241	shq1	78	62.557	ENSRNOG00000005433	Shq1	73	62.557	Rattus_norvegicus
ENSSFOG00015016241	shq1	91	53.430	ENSRBIG00000026280	SHQ1	77	61.644	Rhinopithecus_bieti
ENSSFOG00015016241	shq1	91	55.417	ENSRROG00000034126	SHQ1	77	63.982	Rhinopithecus_roxellana
ENSSFOG00015016241	shq1	91	48.668	ENSSBOG00000021038	SHQ1	75	56.600	Saimiri_boliviensis_boliviensis
ENSSFOG00015016241	shq1	78	61.697	ENSSHAG00000015077	SHQ1	79	60.714	Sarcophilus_harrisii
ENSSFOG00015016241	shq1	99	59.699	ENSSMAG00000016151	shq1	99	59.699	Scophthalmus_maximus
ENSSFOG00015016241	shq1	99	60.561	ENSSDUG00000011986	shq1	99	60.561	Seriola_dumerili
ENSSFOG00015016241	shq1	99	60.233	ENSSLDG00000013908	shq1	99	60.233	Seriola_lalandi_dorsalis
ENSSFOG00015016241	shq1	90	47.963	ENSSARG00000007119	SHQ1	96	47.593	Sorex_araneus
ENSSFOG00015016241	shq1	64	60.000	ENSSPUG00000011526	-	67	60.000	Sphenodon_punctatus
ENSSFOG00015016241	shq1	91	54.078	ENSSSCG00000011518	SHQ1	75	64.138	Sus_scrofa
ENSSFOG00015016241	shq1	80	63.636	ENSTGUG00000009933	SHQ1	77	63.636	Taeniopygia_guttata
ENSSFOG00015016241	shq1	99	56.122	ENSTRUG00000009446	shq1	99	55.782	Takifugu_rubripes
ENSSFOG00015016241	shq1	74	64.508	ENSTNIG00000007354	shq1	98	62.832	Tetraodon_nigroviridis
ENSSFOG00015016241	shq1	67	72.340	ENSTBEG00000011295	SHQ1	56	72.340	Tupaia_belangeri
ENSSFOG00015016241	shq1	91	54.039	ENSTTRG00000005320	SHQ1	76	62.642	Tursiops_truncatus
ENSSFOG00015016241	shq1	91	55.210	ENSUMAG00000024031	SHQ1	74	64.000	Ursus_maritimus
ENSSFOG00015016241	shq1	66	51.395	ENSVPAG00000004880	SHQ1	75	53.125	Vicugna_pacos
ENSSFOG00015016241	shq1	91	53.654	ENSVVUG00000013906	SHQ1	77	61.947	Vulpes_vulpes
ENSSFOG00015016241	shq1	100	50.083	ENSXETG00000032215	shq1	72	60.998	Xenopus_tropicalis