EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016280 (Gene tree)
Gene ID: 108918505
Gene Symbol: hnrnpa1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 21992 bases
Position: chrKV411252.1:7930612-7952603
Accession: 108918505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025295	RRM_1	PF00076.22	1.6e-35	1	2
ENSSFOP00015025295	RRM_1	PF00076.22	1.6e-35	2	2
ENSSFOP00015025312	RRM_1	PF00076.22	1.6e-35	1	2
ENSSFOP00015025312	RRM_1	PF00076.22	1.6e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025593	-	2606	XM_018725829	ENSSFOP00015025312	340 (aa)	XP_018581345	A0A0P7YS19
ENSSFOT00015025573	-	1920	-	ENSSFOP00015025295	340 (aa)	-	A0A0P7YS19

Gene Model

Click here to download ENSSFOG00015016280's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016280	hnrnpa1	51	41.765	ENSSFOG00015022519	hnrnpabb	55	40.201
ENSSFOG00015016280	hnrnpa1	50	34.043	ENSSFOG00015014029	tardbpl	62	31.771
ENSSFOG00015016280	hnrnpa1	56	84.127	ENSSFOG00015001814	hnrnpa3	56	80.296
ENSSFOG00015016280	hnrnpa1	71	39.565	ENSSFOG00015014964	-	53	43.243
ENSSFOG00015016280	hnrnpa1	53	40.782	ENSSFOG00015015634	hnrnpaba	70	38.725
ENSSFOG00015016280	hnrnpa1	50	32.386	ENSSFOG00015008512	tardbp	54	31.844
ENSSFOG00015016280	hnrnpa1	71	39.130	ENSSFOG00015005350	MSI1	58	42.308
ENSSFOG00015016280	hnrnpa1	57	42.308	ENSSFOG00015021687	-	61	42.308
ENSSFOG00015016280	hnrnpa1	64	37.443	ENSSFOG00015005913	hnrnpd	64	37.931
ENSSFOG00015016280	hnrnpa1	85	35.789	ENSSFOG00015005893	hnrnpdl	64	36.548
ENSSFOG00015016280	hnrnpa1	53	64.571	ENSSFOG00015002650	HNRNPA0	60	62.827
ENSSFOG00015016280	hnrnpa1	60	92.683	ENSSFOG00015007588	-	55	94.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016280	hnrnpa1	54	81.622	ENSAPOG00000014678	-	54	81.622	Acanthochromis_polyacanthus
ENSSFOG00015016280	hnrnpa1	71	52.917	ENSAPOG00000003387	HNRNPA0	67	60.104	Acanthochromis_polyacanthus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSAPOG00000003688	hnrnpa3	55	78.818	Acanthochromis_polyacanthus
ENSSFOG00015016280	hnrnpa1	52	55.367	ENSAPOG00000003364	HNRNPA0	61	54.787	Acanthochromis_polyacanthus
ENSSFOG00015016280	hnrnpa1	54	81.967	ENSAPOG00000003641	hnrnpa3	74	81.283	Acanthochromis_polyacanthus
ENSSFOG00015016280	hnrnpa1	90	54.982	ENSAMEG00000004293	-	61	76.159	Ailuropoda_melanoleuca
ENSSFOG00015016280	hnrnpa1	69	53.097	ENSACIG00000021834	HNRNPA0	88	57.500	Amphilophus_citrinellus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSAOCG00000004095	hnrnpa3	55	78.818	Amphiprion_ocellaris
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSAPEG00000022522	hnrnpa3	55	78.818	Amphiprion_percula
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSATEG00000015304	hnrnpa3	60	78.818	Anabas_testudineus
ENSSFOG00015016280	hnrnpa1	54	56.044	ENSATEG00000003526	-	96	56.044	Anabas_testudineus
ENSSFOG00015016280	hnrnpa1	55	81.967	ENSANAG00000037918	-	57	79.798	Aotus_nancymaae
ENSSFOG00015016280	hnrnpa1	60	80.296	ENSACLG00000008532	hnrnpa3	60	80.296	Astatotilapia_calliptera
ENSSFOG00015016280	hnrnpa1	54	81.967	ENSAMXG00000007065	hnrnpa3	56	78.000	Astyanax_mexicanus
ENSSFOG00015016280	hnrnpa1	56	79.474	ENSCJAG00000013830	-	53	78.756	Callithrix_jacchus
ENSSFOG00015016280	hnrnpa1	53	76.667	ENSCAPG00000003643	-	50	74.603	Cavia_aperea
ENSSFOG00015016280	hnrnpa1	55	72.678	ENSCATG00000038569	-	55	70.202	Cercocebus_atys
ENSSFOG00015016280	hnrnpa1	53	50.556	ENSCLAG00000007120	-	53	48.039	Chinchilla_lanigera
ENSSFOG00015016280	hnrnpa1	54	81.967	ENSCANG00000017881	-	54	78.325	Colobus_angolensis_palliatus
ENSSFOG00015016280	hnrnpa1	74	59.200	ENSCGRG00001010070	-	63	66.162	Cricetulus_griseus_chok1gshd
ENSSFOG00015016280	hnrnpa1	89	56.811	ENSCGRG00000003686	-	67	74.603	Cricetulus_griseus_crigri
ENSSFOG00015016280	hnrnpa1	74	59.200	ENSCGRG00000007592	-	62	66.162	Cricetulus_griseus_crigri
ENSSFOG00015016280	hnrnpa1	58	81.218	ENSCVAG00000018995	hnrnpa3	57	81.218	Cyprinodon_variegatus
ENSSFOG00015016280	hnrnpa1	54	82.514	ENSDARG00000059351	hnrnpa3	83	78.325	Danio_rerio
ENSSFOG00015016280	hnrnpa1	54	66.304	ENSDORG00000023528	-	52	62.439	Dipodomys_ordii
ENSSFOG00015016280	hnrnpa1	54	73.118	ENSEBUG00000016570	HNRNPA0	59	68.812	Eptatretus_burgeri
ENSSFOG00015016280	hnrnpa1	92	67.308	ENSELUG00000023080	hnrnpa3	68	78.283	Esox_lucius
ENSSFOG00015016280	hnrnpa1	54	67.582	ENSFDAG00000014067	-	58	66.497	Fukomys_damarensis
ENSSFOG00015016280	hnrnpa1	52	58.989	ENSFDAG00000019780	HNRNPA0	79	56.701	Fukomys_damarensis
ENSSFOG00015016280	hnrnpa1	91	47.249	ENSFDAG00000009547	-	52	54.545	Fukomys_damarensis
ENSSFOG00015016280	hnrnpa1	54	65.027	ENSFDAG00000018739	-	70	64.141	Fukomys_damarensis
ENSSFOG00015016280	hnrnpa1	51	60.377	ENSFHEG00000008384	HNRNPA0	80	60.377	Fundulus_heteroclitus
ENSSFOG00015016280	hnrnpa1	52	56.180	ENSFHEG00000008390	HNRNPA0	56	55.263	Fundulus_heteroclitus
ENSSFOG00015016280	hnrnpa1	60	77.833	ENSGACG00000004477	hnrnpa3	67	77.833	Gasterosteus_aculeatus
ENSSFOG00015016280	hnrnpa1	56	60.556	ENSHBUG00000023868	HNRNPA0	74	59.788	Haplochromis_burtoni
ENSSFOG00015016280	hnrnpa1	60	79.803	ENSHBUG00000019734	hnrnpa3	60	78.818	Haplochromis_burtoni
ENSSFOG00015016280	hnrnpa1	55	81.522	ENSHGLG00100006677	-	60	78.788	Heterocephalus_glaber_male
ENSSFOG00015016280	hnrnpa1	54	78.142	ENSHGLG00100001336	-	56	73.892	Heterocephalus_glaber_male
ENSSFOG00015016280	hnrnpa1	54	58.683	ENSHCOG00000007174	HNRNPA0	95	58.683	Hippocampus_comes
ENSSFOG00015016280	hnrnpa1	54	82.514	ENSIPUG00000019815	RO32	59	80.203	Ictalurus_punctatus
ENSSFOG00015016280	hnrnpa1	66	52.489	ENSJJAG00000006954	Hnrnpa0	62	58.242	Jaculus_jaculus
ENSSFOG00015016280	hnrnpa1	60	79.310	ENSKMAG00000015973	hnrnpa3	60	79.310	Kryptolebias_marmoratus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSLBEG00000016767	hnrnpa3	60	78.818	Labrus_bergylta
ENSSFOG00015016280	hnrnpa1	95	50.637	ENSLACG00000014480	HNRNPA0	63	56.250	Latimeria_chalumnae
ENSSFOG00015016280	hnrnpa1	54	84.865	ENSLACG00000008189	hnrnpa3	57	79.902	Latimeria_chalumnae
ENSSFOG00015016280	hnrnpa1	56	82.011	ENSLOCG00000006986	hnrnpa3	58	79.803	Lepisosteus_oculatus
ENSSFOG00015016280	hnrnpa1	56	95.312	ENSLOCG00000006476	-	55	92.611	Lepisosteus_oculatus
ENSSFOG00015016280	hnrnpa1	55	84.713	ENSLAFG00000027712	-	58	84.713	Loxodonta_africana
ENSSFOG00015016280	hnrnpa1	55	72.432	ENSMMUG00000031232	-	55	70.000	Macaca_mulatta
ENSSFOG00015016280	hnrnpa1	92	70.000	ENSMNEG00000038943	-	79	67.677	Macaca_nemestrina
ENSSFOG00015016280	hnrnpa1	55	71.038	ENSMLEG00000033415	-	56	67.822	Mandrillus_leucophaeus
ENSSFOG00015016280	hnrnpa1	62	57.635	ENSMAMG00000017754	HNRNPA0	74	59.788	Mastacembelus_armatus
ENSSFOG00015016280	hnrnpa1	58	82.234	ENSMZEG00005004663	hnrnpa3	59	81.407	Maylandia_zebra
ENSSFOG00015016280	hnrnpa1	52	58.989	ENSMAUG00000018485	Hnrnpa0	62	57.527	Mesocricetus_auratus
ENSSFOG00015016280	hnrnpa1	54	73.913	ENSMODG00000024570	-	54	71.717	Monodelphis_domestica
ENSSFOG00015016280	hnrnpa1	56	57.609	ENSMODG00000014720	HNRNPA0	72	56.915	Monodelphis_domestica
ENSSFOG00015016280	hnrnpa1	54	56.593	ENSMODG00000002463	-	97	56.593	Monodelphis_domestica
ENSSFOG00015016280	hnrnpa1	66	79.882	ENSMALG00000009691	hnrnpa3	82	79.487	Monopterus_albus
ENSSFOG00015016280	hnrnpa1	52	58.989	ENSMLUG00000028644	-	55	58.791	Myotis_lucifugus
ENSSFOG00015016280	hnrnpa1	89	51.475	ENSNGAG00000001008	-	54	63.000	Nannospalax_galili
ENSSFOG00015016280	hnrnpa1	54	79.235	ENSNLEG00000027151	-	57	75.862	Nomascus_leucogenys
ENSSFOG00015016280	hnrnpa1	92	64.331	ENSODEG00000016578	-	85	63.107	Octodon_degus
ENSSFOG00015016280	hnrnpa1	60	80.296	ENSONIG00000008607	hnrnpa3	50	80.296	Oreochromis_niloticus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSORLG00000017561	hnrnpa3	59	78.818	Oryzias_latipes
ENSSFOG00015016280	hnrnpa1	55	51.064	ENSORLG00000027074	-	83	51.613	Oryzias_latipes
ENSSFOG00015016280	hnrnpa1	60	50.495	ENSORLG00000025332	-	57	54.286	Oryzias_latipes
ENSSFOG00015016280	hnrnpa1	60	50.495	ENSORLG00000025015	-	57	54.286	Oryzias_latipes
ENSSFOG00015016280	hnrnpa1	92	42.947	ENSORLG00020007505	-	58	52.874	Oryzias_latipes_hni
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSORLG00020020788	hnrnpa3	59	78.818	Oryzias_latipes_hni
ENSSFOG00015016280	hnrnpa1	92	42.587	ENSORLG00020008203	-	62	51.087	Oryzias_latipes_hni
ENSSFOG00015016280	hnrnpa1	88	42.857	ENSORLG00020022487	-	62	53.672	Oryzias_latipes_hni
ENSSFOG00015016280	hnrnpa1	93	42.945	ENSORLG00020007109	-	58	51.648	Oryzias_latipes_hni
ENSSFOG00015016280	hnrnpa1	92	43.260	ENSORLG00015016169	HNRNPA0	59	52.299	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSORLG00015014774	hnrnpa3	59	78.818	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	55	52.432	ENSORLG00015015185	-	63	52.717	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	55	52.381	ENSORLG00015015182	-	82	52.660	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	93	44.654	ENSORLG00015017144	-	59	53.371	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	55	46.032	ENSORLG00015016236	HNRNPA0	60	45.806	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	92	42.038	ENSORLG00015016157	-	65	50.811	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	92	44.720	ENSORLG00015016507	-	59	52.083	Oryzias_latipes_hsok
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSOMEG00000004838	hnrnpa3	60	78.818	Oryzias_melastigma
ENSSFOG00015016280	hnrnpa1	53	58.791	ENSOGAG00000025754	HNRNPA0	80	57.368	Otolemur_garnettii
ENSSFOG00015016280	hnrnpa1	56	80.952	ENSPKIG00000022916	hnrnpa3	72	77.833	Paramormyrops_kingsleyae
ENSSFOG00015016280	hnrnpa1	83	50.181	ENSPEMG00000020274	Hnrnpa0	73	57.527	Peromyscus_maniculatus_bairdii
ENSSFOG00015016280	hnrnpa1	61	69.378	ENSPMAG00000004449	-	78	75.956	Petromyzon_marinus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSPFOG00000014049	hnrnpa3	61	78.818	Poecilia_formosa
ENSSFOG00015016280	hnrnpa1	94	49.180	ENSPLAG00000015223	-	65	55.276	Poecilia_latipinna
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSPMEG00000006390	hnrnpa3	61	78.818	Poecilia_mexicana
ENSSFOG00015016280	hnrnpa1	56	58.333	ENSPMEG00000017025	HNRNPA0	97	58.333	Poecilia_mexicana
ENSSFOG00015016280	hnrnpa1	51	60.377	ENSPREG00000010619	HNRNPA0	75	60.377	Poecilia_reticulata
ENSSFOG00015016280	hnrnpa1	92	67.197	ENSPREG00000005411	hnrnpa3	63	80.105	Poecilia_reticulata
ENSSFOG00015016280	hnrnpa1	54	81.421	ENSPPYG00000001012	-	63	79.293	Pongo_abelii
ENSSFOG00015016280	hnrnpa1	89	84.375	ENSPPYG00000012967	-	87	74.742	Pongo_abelii
ENSSFOG00015016280	hnrnpa1	55	83.889	ENSPNYG00000008424	hnrnpa3	75	84.270	Pundamilia_nyererei
ENSSFOG00015016280	hnrnpa1	54	61.798	ENSPNAG00000023333	HNRNPA0	63	61.081	Pygocentrus_nattereri
ENSSFOG00015016280	hnrnpa1	60	51.659	ENSRBIG00000023673	HNRNPA0	62	57.368	Rhinopithecus_bieti
ENSSFOG00015016280	hnrnpa1	89	56.550	ENSRROG00000034643	-	56	65.803	Rhinopithecus_roxellana
ENSSFOG00015016280	hnrnpa1	60	51.659	ENSRROG00000002558	HNRNPA0	62	57.368	Rhinopithecus_roxellana
ENSSFOG00015016280	hnrnpa1	92	68.239	ENSSMAG00000015218	hnrnpa3	53	76.847	Scophthalmus_maximus
ENSSFOG00015016280	hnrnpa1	60	78.325	ENSSDUG00000000381	hnrnpa3	65	76.847	Seriola_dumerili
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSSPAG00000008969	hnrnpa3	60	78.818	Stegastes_partitus
ENSSFOG00015016280	hnrnpa1	91	53.704	ENSSSCG00000040926	-	51	66.120	Sus_scrofa
ENSSFOG00015016280	hnrnpa1	91	54.012	ENSSSCG00000033635	-	54	64.249	Sus_scrofa
ENSSFOG00015016280	hnrnpa1	58	79.188	ENSTNIG00000016958	hnrnpa3	57	78.680	Tetraodon_nigroviridis
ENSSFOG00015016280	hnrnpa1	57	83.077	ENSXETG00000001806	hnrnpa3	52	83.077	Xenopus_tropicalis
ENSSFOG00015016280	hnrnpa1	56	58.333	ENSXMAG00000019804	HNRNPA0	96	58.333	Xiphophorus_maculatus
ENSSFOG00015016280	hnrnpa1	60	78.818	ENSXMAG00000000439	hnrnpa3	60	78.818	Xiphophorus_maculatus