EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015016292 (Gene tree)
Gene ID: 108940251
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7837 bases
Position: chrKV411201.1:1024294-1032130
Accession: 108940251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025307	MBD	PF01429.19	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015025588	-	5437	XM_018762251	ENSSFOP00015025307	470 (aa)	XP_018617767	A0A1W5AQ62

Gene Model

Click here to download ENSSFOG00015016292's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016292	mbd4	95	43.145	ENSG00000129071	MBD4	67	76.571	Homo_sapiens
ENSSFOG00015016292	mbd4	96	47.390	ENSAPOG00000021668	mbd4	95	47.390	Acanthochromis_polyacanthus
ENSSFOG00015016292	mbd4	96	45.455	ENSAOCG00000001157	mbd4	95	45.208	Amphiprion_ocellaris
ENSSFOG00015016292	mbd4	96	45.877	ENSAPEG00000016131	mbd4	95	46.008	Amphiprion_percula
ENSSFOG00015016292	mbd4	96	46.347	ENSATEG00000014594	MBD4	86	46.347	Anabas_testudineus
ENSSFOG00015016292	mbd4	59	68.718	ENSAMXG00000017271	mbd4	68	68.718	Astyanax_mexicanus
ENSSFOG00015016292	mbd4	95	41.551	ENSBTAG00000021645	MBD4	86	41.551	Bos_taurus
ENSSFOG00015016292	mbd4	95	42.231	ENSCJAG00000017293	MBD4	85	42.629	Callithrix_jacchus
ENSSFOG00015016292	mbd4	95	43.333	ENSCCAG00000029796	MBD4	85	43.080	Cebus_capucinus
ENSSFOG00015016292	mbd4	95	43.676	ENSCATG00000035211	MBD4	53	77.519	Cercocebus_atys
ENSSFOG00015016292	mbd4	95	43.874	ENSCSAG00000009037	MBD4	85	44.071	Chlorocebus_sabaeus
ENSSFOG00015016292	mbd4	97	41.667	ENSCPBG00000014704	MBD4	89	41.667	Chrysemys_picta_bellii
ENSSFOG00015016292	mbd4	95	44.071	ENSCANG00000007120	MBD4	85	44.269	Colobus_angolensis_palliatus
ENSSFOG00015016292	mbd4	95	39.387	ENSEBUG00000010816	mbd4	98	39.387	Eptatretus_burgeri
ENSSFOG00015016292	mbd4	96	47.000	ENSELUG00000018483	MBD4	83	47.200	Esox_lucius
ENSSFOG00015016292	mbd4	95	45.436	ENSGMOG00000013830	mbd4	100	45.436	Gadus_morhua
ENSSFOG00015016292	mbd4	97	42.035	ENSGAGG00000018644	MBD4	89	42.035	Gopherus_agassizii
ENSSFOG00015016292	mbd4	53	75.000	ENSGGOG00000010698	MBD4	85	41.434	Gorilla_gorilla
ENSSFOG00015016292	mbd4	95	43.182	ENSSTOG00000020663	MBD4	86	43.182	Ictidomys_tridecemlineatus
ENSSFOG00015016292	mbd4	55	72.222	ENSKMAG00000015015	mbd4	98	45.859	Kryptolebias_marmoratus
ENSSFOG00015016292	mbd4	96	44.538	ENSLBEG00000005669	MBD4	87	44.513	Labrus_bergylta
ENSSFOG00015016292	mbd4	95	48.193	ENSLOCG00000013054	MBD4	98	48.193	Lepisosteus_oculatus
ENSSFOG00015016292	mbd4	95	43.676	ENSMFAG00000002266	MBD4	85	43.676	Macaca_fascicularis
ENSSFOG00015016292	mbd4	95	42.885	ENSMMUG00000012723	MBD4	52	77.692	Macaca_mulatta
ENSSFOG00015016292	mbd4	90	41.922	ENSMNEG00000029752	MBD4	85	42.236	Macaca_nemestrina
ENSSFOG00015016292	mbd4	95	43.676	ENSMLEG00000024859	MBD4	53	77.519	Mandrillus_leucophaeus
ENSSFOG00015016292	mbd4	96	45.473	ENSMALG00000021517	mbd4	87	45.473	Monopterus_albus
ENSSFOG00015016292	mbd4	95	43.636	MGP_CAROLIEiJ_G0028760	Mbd4	86	43.636	Mus_caroli
ENSSFOG00015016292	mbd4	61	74.444	ENSMUSG00000030322	Mbd4	54	74.444	Mus_musculus
ENSSFOG00015016292	mbd4	97	43.750	MGP_SPRETEiJ_G0029788	Mbd4	90	43.750	Mus_spretus
ENSSFOG00015016292	mbd4	95	43.927	ENSMPUG00000017195	MBD4	85	43.927	Mustela_putorius_furo
ENSSFOG00015016292	mbd4	95	42.054	ENSNLEG00000005337	MBD4	85	41.717	Nomascus_leucogenys
ENSSFOG00015016292	mbd4	95	46.868	ENSONIG00000017212	mbd4	100	46.868	Oreochromis_niloticus
ENSSFOG00015016292	mbd4	55	74.211	ENSORLG00000011049	mbd4	97	48.817	Oryzias_latipes
ENSSFOG00015016292	mbd4	53	77.095	ENSORLG00020020013	mbd4	60	77.095	Oryzias_latipes_hni
ENSSFOG00015016292	mbd4	95	49.247	ENSORLG00015015342	mbd4	97	49.032	Oryzias_latipes_hsok
ENSSFOG00015016292	mbd4	96	48.894	ENSOMEG00000008819	mbd4	91	48.894	Oryzias_melastigma
ENSSFOG00015016292	mbd4	95	43.058	ENSPPAG00000036528	MBD4	85	43.058	Pan_paniscus
ENSSFOG00015016292	mbd4	95	42.376	ENSPTRG00000015377	MBD4	85	42.376	Pan_troglodytes
ENSSFOG00015016292	mbd4	95	43.676	ENSPANG00000015047	MBD4	85	43.874	Papio_anubis
ENSSFOG00015016292	mbd4	96	54.329	ENSPKIG00000012306	MBD4	75	54.329	Paramormyrops_kingsleyae
ENSSFOG00015016292	mbd4	95	44.685	ENSPFOG00000014471	mbd4	98	44.685	Poecilia_formosa
ENSSFOG00015016292	mbd4	95	42.369	ENSPPYG00000013417	MBD4	85	42.369	Pongo_abelii
ENSSFOG00015016292	mbd4	58	69.744	ENSPNAG00000000509	mbd4	65	69.744	Pygocentrus_nattereri
ENSSFOG00015016292	mbd4	95	43.676	ENSRBIG00000027722	MBD4	85	43.874	Rhinopithecus_bieti
ENSSFOG00015016292	mbd4	95	43.676	ENSRROG00000029136	MBD4	85	43.874	Rhinopithecus_roxellana
ENSSFOG00015016292	mbd4	95	42.998	ENSSBOG00000016810	MBD4	86	42.998	Saimiri_boliviensis_boliviensis
ENSSFOG00015016292	mbd4	98	43.058	ENSSMAG00000013958	-	70	43.058	Scophthalmus_maximus
ENSSFOG00015016292	mbd4	96	47.059	ENSSDUG00000001365	mbd4	94	47.059	Seriola_dumerili
ENSSFOG00015016292	mbd4	83	42.040	ENSSLDG00000010295	MBD4	81	42.040	Seriola_lalandi_dorsalis
ENSSFOG00015016292	mbd4	61	78.857	ENSSPUG00000017344	MBD4	52	78.857	Sphenodon_punctatus
ENSSFOG00015016292	mbd4	71	60.166	ENSTRUG00000010124	mbd4	72	60.166	Takifugu_rubripes
ENSSFOG00015016292	mbd4	95	44.181	ENSTNIG00000017927	mbd4	100	44.181	Tetraodon_nigroviridis
ENSSFOG00015016292	mbd4	95	43.089	ENSUAMG00000000814	MBD4	99	43.089	Ursus_americanus
ENSSFOG00015016292	mbd4	95	43.089	ENSUMAG00000017542	MBD4	86	43.089	Ursus_maritimus
ENSSFOG00015016292	mbd4	95	43.058	ENSVVUG00000014222	MBD4	85	43.058	Vulpes_vulpes
ENSSFOG00015016292	mbd4	95	43.231	ENSXETG00000026622	mbd4	89	43.231	Xenopus_tropicalis
ENSSFOG00015016292	mbd4	95	46.567	ENSXMAG00000021129	mbd4	98	45.416	Xiphophorus_maculatus