EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8377 bases
Position: chrKV410867.1:575-8951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015025770	zf-CCHC	PF00098.23	2.2e-08	1	1
ENSSFOP00015025740	zf-CCHC	PF00098.23	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015026022	-	453	-	ENSSFOP00015025740	150 (aa)	-	-
ENSSFOT00015026054	-	420	-	ENSSFOP00015025770	139 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015016511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016511	-	55	57.895	ENSSFOG00015004269	-	75	71.429
ENSSFOG00015016511	-	71	92.929	ENSSFOG00015012405	-	63	84.615
ENSSFOG00015016511	-	74	72.973	ENSSFOG00015023899	-	73	72.973
ENSSFOG00015016511	-	70	78.351	ENSSFOG00015017573	-	57	73.043
ENSSFOG00015016511	-	76	90.476	ENSSFOG00015015819	-	58	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016511	-	68	47.872	ENSACLG00000015881	-	54	41.964	Astatotilapia_calliptera
ENSSFOG00015016511	-	68	47.872	ENSACLG00000011316	-	53	42.342	Astatotilapia_calliptera
ENSSFOG00015016511	-	62	45.349	ENSACLG00000019919	-	69	38.532	Astatotilapia_calliptera
ENSSFOG00015016511	-	68	47.872	ENSACLG00000014014	-	52	42.342	Astatotilapia_calliptera
ENSSFOG00015016511	-	59	31.000	ENSAMXG00000035711	-	50	31.000	Astyanax_mexicanus
ENSSFOG00015016511	-	62	36.538	ENSELUG00000002602	-	55	36.538	Esox_lucius
ENSSFOG00015016511	-	65	50.549	ENSGACG00000018075	-	66	47.321	Gasterosteus_aculeatus
ENSSFOG00015016511	-	68	48.936	ENSGACG00000000773	-	66	46.087	Gasterosteus_aculeatus
ENSSFOG00015016511	-	62	45.349	ENSHBUG00000001589	-	56	38.532	Haplochromis_burtoni
ENSSFOG00015016511	-	62	39.535	ENSIPUG00000013198	-	51	33.636	Ictalurus_punctatus
ENSSFOG00015016511	-	63	43.182	ENSLOCG00000017639	-	62	37.168	Lepisosteus_oculatus
ENSSFOG00015016511	-	58	44.068	ENSLOCG00000000632	-	58	37.255	Lepisosteus_oculatus
ENSSFOG00015016511	-	70	36.082	ENSLOCG00000018075	-	56	34.545	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	38.889	ENSLOCG00000017974	-	56	39.640	Lepisosteus_oculatus
ENSSFOG00015016511	-	68	46.154	ENSLOCG00000008338	-	70	42.268	Lepisosteus_oculatus
ENSSFOG00015016511	-	65	41.111	ENSLOCG00000017666	-	88	41.111	Lepisosteus_oculatus
ENSSFOG00015016511	-	67	43.011	ENSLOCG00000017303	-	62	39.496	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	40.909	ENSLOCG00000017302	-	65	34.513	Lepisosteus_oculatus
ENSSFOG00015016511	-	67	32.743	ENSLOCG00000017305	-	77	32.743	Lepisosteus_oculatus
ENSSFOG00015016511	-	66	57.377	ENSLOCG00000000361	-	70	46.429	Lepisosteus_oculatus
ENSSFOG00015016511	-	64	42.697	ENSLOCG00000017530	-	66	35.398	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	39.773	ENSLOCG00000018355	-	66	35.398	Lepisosteus_oculatus
ENSSFOG00015016511	-	56	43.590	ENSLOCG00000017867	-	58	35.644	Lepisosteus_oculatus
ENSSFOG00015016511	-	58	48.750	ENSLOCG00000017501	-	66	38.532	Lepisosteus_oculatus
ENSSFOG00015016511	-	65	40.659	ENSLOCG00000017503	-	63	36.283	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	42.045	ENSLOCG00000017670	-	62	37.168	Lepisosteus_oculatus
ENSSFOG00015016511	-	64	42.593	ENSLOCG00000000320	-	59	35.897	Lepisosteus_oculatus
ENSSFOG00015016511	-	68	50.820	ENSLOCG00000012680	-	67	42.500	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	39.080	ENSLOCG00000002624	-	63	36.937	Lepisosteus_oculatus
ENSSFOG00015016511	-	68	46.809	ENSLOCG00000017694	-	65	41.593	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	44.318	ENSLOCG00000006695	-	64	38.739	Lepisosteus_oculatus
ENSSFOG00015016511	-	60	49.398	ENSLOCG00000010606	-	70	44.554	Lepisosteus_oculatus
ENSSFOG00015016511	-	60	46.429	ENSLOCG00000017641	-	78	36.607	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	40.909	ENSLOCG00000017327	-	77	34.513	Lepisosteus_oculatus
ENSSFOG00015016511	-	63	43.182	ENSLOCG00000017328	-	66	36.283	Lepisosteus_oculatus
ENSSFOG00015016511	-	67	37.634	ENSLOCG00000017824	-	81	32.743	Lepisosteus_oculatus
ENSSFOG00015016511	-	68	47.872	ENSMZEG00005028130	-	52	41.964	Maylandia_zebra
ENSSFOG00015016511	-	68	48.315	ENSMZEG00005025873	-	90	48.315	Maylandia_zebra
ENSSFOG00015016511	-	61	45.122	ENSMZEG00005028547	-	81	40.404	Maylandia_zebra
ENSSFOG00015016511	-	68	47.872	ENSMZEG00005028553	-	53	41.964	Maylandia_zebra
ENSSFOG00015016511	-	68	44.211	ENSNBRG00000024092	-	59	38.983	Neolamprologus_brichardi
ENSSFOG00015016511	-	65	54.444	ENSPKIG00000015924	-	59	54.444	Paramormyrops_kingsleyae
ENSSFOG00015016511	-	78	66.667	ENSPKIG00000015947	-	56	60.317	Paramormyrops_kingsleyae
ENSSFOG00015016511	-	59	32.000	ENSPNYG00000002656	-	61	31.132	Pundamilia_nyererei
ENSSFOG00015016511	-	64	36.559	ENSPNYG00000015964	-	59	36.559	Pundamilia_nyererei
ENSSFOG00015016511	-	69	51.042	ENSPNAG00000004865	-	59	47.788	Pygocentrus_nattereri
ENSSFOG00015016511	-	80	47.788	ENSPNAG00000002955	-	80	47.788	Pygocentrus_nattereri
ENSSFOG00015016511	-	71	51.020	ENSPNAG00000007153	-	60	47.826	Pygocentrus_nattereri
ENSSFOG00015016511	-	73	41.176	ENSXETG00000030090	-	63	37.398	Xenopus_tropicalis
ENSSFOG00015016511	-	61	35.922	ENSXETG00000033641	-	64	35.922	Xenopus_tropicalis
ENSSFOG00015016511	-	68	46.000	ENSXETG00000034305	-	72	43.220	Xenopus_tropicalis
ENSSFOG00015016511	-	59	35.354	ENSXETG00000032297	-	58	35.354	Xenopus_tropicalis
ENSSFOG00015016511	-	59	35.354	ENSXETG00000031282	-	58	35.354	Xenopus_tropicalis
ENSSFOG00015016511	-	60	36.145	ENSXETG00000032242	-	67	36.145	Xenopus_tropicalis
ENSSFOG00015016511	-	59	35.354	ENSXETG00000032402	-	58	35.354	Xenopus_tropicalis