EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015016814 (Gene tree)
Gene ID: 108932031
Gene Symbol: smarcad1b
Alias: si:dkey-76p7.6
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15864 bases
Position: chrKV410795.1:3063034-3078897
Accession: 108932031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015026146	ResIII	PF04851.15	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015026440	-	4653	XM_018748182	ENSSFOP00015026146	1017 (aa)	XP_018603698	A0A1W4ZT56

Gene Model

Click here to download ENSSFOG00015016814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015016814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015016814	smarcad1b	52	35.524	ENSSFOG00015017895	hells	69	35.368
ENSSFOG00015016814	smarcad1b	51	37.476	ENSSFOG00015003649	chd1l	53	38.012
ENSSFOG00015016814	smarcad1b	79	66.049	ENSSFOG00015020909	smarcad1a	100	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015016814	smarcad1b	100	50.465	ENSG00000163104	SMARCAD1	99	68.013	Homo_sapiens
ENSSFOG00015016814	smarcad1b	100	49.908	ENSAMEG00000005844	SMARCAD1	84	55.531	Ailuropoda_melanoleuca
ENSSFOG00015016814	smarcad1b	69	74.851	ENSACIG00000018326	smarcad1a	94	74.740	Amphilophus_citrinellus
ENSSFOG00015016814	smarcad1b	92	75.902	ENSAOCG00000019762	smarcad1a	97	69.018	Amphiprion_ocellaris
ENSSFOG00015016814	smarcad1b	81	74.594	ENSATEG00000015608	smarcad1a	81	74.594	Anabas_testudineus
ENSSFOG00015016814	smarcad1b	96	52.480	ENSAPLG00000004630	SMARCAD1	99	52.888	Anas_platyrhynchos
ENSSFOG00015016814	smarcad1b	100	49.579	ENSACAG00000013554	SMARCAD1	100	49.906	Anolis_carolinensis
ENSSFOG00015016814	smarcad1b	100	50.646	ENSANAG00000020488	SMARCAD1	95	55.860	Aotus_nancymaae
ENSSFOG00015016814	smarcad1b	92	74.603	ENSACLG00000017063	smarcad1a	97	68.966	Astatotilapia_calliptera
ENSSFOG00015016814	smarcad1b	70	69.014	ENSAMXG00000015470	smarcad1a	94	72.239	Astyanax_mexicanus
ENSSFOG00015016814	smarcad1b	96	62.500	ENSAMXG00000019130	smarcad1b	99	62.907	Astyanax_mexicanus
ENSSFOG00015016814	smarcad1b	100	50.417	ENSBTAG00000017061	SMARCAD1	100	50.327	Bos_taurus
ENSSFOG00015016814	smarcad1b	64	40.785	WBGene00010845	M03C11.8	70	39.771	Caenorhabditis_elegans
ENSSFOG00015016814	smarcad1b	100	50.694	ENSCJAG00000006778	SMARCAD1	100	50.838	Callithrix_jacchus
ENSSFOG00015016814	smarcad1b	100	50.046	ENSCAFG00000010026	SMARCAD1	100	50.047	Canis_familiaris
ENSSFOG00015016814	smarcad1b	88	55.641	ENSCAFG00020003994	SMARCAD1	97	55.641	Canis_lupus_dingo
ENSSFOG00015016814	smarcad1b	100	50.418	ENSCHIG00000012905	SMARCAD1	100	50.327	Capra_hircus
ENSSFOG00015016814	smarcad1b	100	50.882	ENSTSYG00000002706	SMARCAD1	100	51.076	Carlito_syrichta
ENSSFOG00015016814	smarcad1b	84	49.766	ENSCAPG00000016744	SMARCAD1	89	50.058	Cavia_aperea
ENSSFOG00015016814	smarcad1b	100	50.092	ENSCPOG00000011398	SMARCAD1	84	55.750	Cavia_porcellus
ENSSFOG00015016814	smarcad1b	100	50.647	ENSCCAG00000022264	SMARCAD1	99	68.182	Cebus_capucinus
ENSSFOG00015016814	smarcad1b	100	50.231	ENSCATG00000035663	SMARCAD1	97	55.641	Cercocebus_atys
ENSSFOG00015016814	smarcad1b	86	55.693	ENSCSAG00000004186	SMARCAD1	100	55.693	Chlorocebus_sabaeus
ENSSFOG00015016814	smarcad1b	100	50.509	ENSCPBG00000013203	SMARCAD1	84	56.106	Chrysemys_picta_bellii
ENSSFOG00015016814	smarcad1b	64	49.094	ENSCING00000001688	-	99	49.094	Ciona_intestinalis
ENSSFOG00015016814	smarcad1b	100	50.417	ENSCANG00000003556	SMARCAD1	99	68.013	Colobus_angolensis_palliatus
ENSSFOG00015016814	smarcad1b	100	50.512	ENSCGRG00001015056	Smarcad1	85	55.947	Cricetulus_griseus_chok1gshd
ENSSFOG00015016814	smarcad1b	100	50.512	ENSCGRG00000014087	Smarcad1	85	55.947	Cricetulus_griseus_crigri
ENSSFOG00015016814	smarcad1b	100	56.759	ENSCSEG00000017903	smarcad1a	100	57.486	Cynoglossus_semilaevis
ENSSFOG00015016814	smarcad1b	100	57.435	ENSCSEG00000014419	-	100	57.077	Cynoglossus_semilaevis
ENSSFOG00015016814	smarcad1b	64	76.888	ENSDARG00000073721	smarcad1b	99	61.461	Danio_rerio
ENSSFOG00015016814	smarcad1b	100	58.658	ENSDARG00000014041	smarcad1a	100	58.949	Danio_rerio
ENSSFOG00015016814	smarcad1b	100	51.076	ENSDNOG00000000806	-	100	51.076	Dasypus_novemcinctus
ENSSFOG00015016814	smarcad1b	90	55.340	ENSDORG00000012331	Smarcad1	85	55.969	Dipodomys_ordii
ENSSFOG00015016814	smarcad1b	63	44.222	FBgn0032157	Etl1	83	42.172	Drosophila_melanogaster
ENSSFOG00015016814	smarcad1b	60	48.710	ENSEBUG00000003969	smarcad1a	94	47.426	Eptatretus_burgeri
ENSSFOG00015016814	smarcad1b	100	50.324	ENSEASG00005012382	SMARCAD1	100	50.233	Equus_asinus_asinus
ENSSFOG00015016814	smarcad1b	100	50.324	ENSECAG00000011562	SMARCAD1	100	50.233	Equus_caballus
ENSSFOG00015016814	smarcad1b	95	60.958	ENSELUG00000019154	smarcad1b	93	60.958	Esox_lucius
ENSSFOG00015016814	smarcad1b	100	62.188	ENSELUG00000018535	smarcad1a	100	62.333	Esox_lucius
ENSSFOG00015016814	smarcad1b	100	50.416	ENSFCAG00000003958	SMARCAD1	99	68.013	Felis_catus
ENSSFOG00015016814	smarcad1b	100	50.000	ENSFALG00000006089	SMARCAD1	100	50.608	Ficedula_albicollis
ENSSFOG00015016814	smarcad1b	100	50.602	ENSFDAG00000017027	SMARCAD1	100	50.231	Fukomys_damarensis
ENSSFOG00015016814	smarcad1b	93	74.218	ENSFHEG00000012778	smarcad1a	100	60.703	Fundulus_heteroclitus
ENSSFOG00015016814	smarcad1b	90	63.221	ENSGMOG00000018995	smarcad1a	97	64.191	Gadus_morhua
ENSSFOG00015016814	smarcad1b	84	55.556	ENSGALG00000037339	SMARCAD1	96	55.556	Gallus_gallus
ENSSFOG00015016814	smarcad1b	99	78.025	ENSGAFG00000013498	smarcad1a	100	54.037	Gambusia_affinis
ENSSFOG00015016814	smarcad1b	90	64.052	ENSGACG00000007327	smarcad1a	98	64.570	Gasterosteus_aculeatus
ENSSFOG00015016814	smarcad1b	100	50.604	ENSGAGG00000008582	SMARCAD1	100	50.699	Gopherus_agassizii
ENSSFOG00015016814	smarcad1b	100	50.324	ENSGGOG00000023001	SMARCAD1	100	50.372	Gorilla_gorilla
ENSSFOG00015016814	smarcad1b	92	74.603	ENSHBUG00000011042	smarcad1a	97	68.966	Haplochromis_burtoni
ENSSFOG00015016814	smarcad1b	100	50.139	ENSHGLG00000005070	SMARCAD1	100	49.861	Heterocephalus_glaber_female
ENSSFOG00015016814	smarcad1b	100	50.139	ENSHGLG00100006812	SMARCAD1	100	49.861	Heterocephalus_glaber_male
ENSSFOG00015016814	smarcad1b	87	71.674	ENSHCOG00000007848	smarcad1a	85	57.573	Hippocampus_comes
ENSSFOG00015016814	smarcad1b	99	56.072	ENSIPUG00000000242	smarcad1a	95	61.383	Ictalurus_punctatus
ENSSFOG00015016814	smarcad1b	96	61.963	ENSIPUG00000022817	smarcad1b	99	61.765	Ictalurus_punctatus
ENSSFOG00015016814	smarcad1b	100	50.186	ENSSTOG00000001227	SMARCAD1	100	50.327	Ictidomys_tridecemlineatus
ENSSFOG00015016814	smarcad1b	100	51.020	ENSJJAG00000022342	Smarcad1	100	50.743	Jaculus_jaculus
ENSSFOG00015016814	smarcad1b	64	74.507	ENSKMAG00000021351	smarcad1a	86	73.373	Kryptolebias_marmoratus
ENSSFOG00015016814	smarcad1b	100	62.136	ENSLOCG00000012909	smarcad1a	100	62.039	Lepisosteus_oculatus
ENSSFOG00015016814	smarcad1b	100	49.442	ENSLAFG00000000040	SMARCAD1	100	49.766	Loxodonta_africana
ENSSFOG00015016814	smarcad1b	100	50.231	ENSMFAG00000042606	SMARCAD1	97	55.641	Macaca_fascicularis
ENSSFOG00015016814	smarcad1b	88	55.641	ENSMMUG00000022242	SMARCAD1	97	55.641	Macaca_mulatta
ENSSFOG00015016814	smarcad1b	100	50.231	ENSMNEG00000038117	SMARCAD1	99	68.013	Macaca_nemestrina
ENSSFOG00015016814	smarcad1b	100	50.231	ENSMLEG00000038333	SMARCAD1	99	68.013	Mandrillus_leucophaeus
ENSSFOG00015016814	smarcad1b	68	74.892	ENSMAMG00000000933	smarcad1a	100	59.831	Mastacembelus_armatus
ENSSFOG00015016814	smarcad1b	100	59.564	ENSMZEG00005005203	smarcad1a	100	60.574	Maylandia_zebra
ENSSFOG00015016814	smarcad1b	96	50.099	ENSMGAG00000005577	SMARCAD1	99	47.666	Meleagris_gallopavo
ENSSFOG00015016814	smarcad1b	100	50.512	ENSMAUG00000008417	Smarcad1	85	56.057	Mesocricetus_auratus
ENSSFOG00015016814	smarcad1b	100	50.836	ENSMICG00000009746	SMARCAD1	100	50.836	Microcebus_murinus
ENSSFOG00015016814	smarcad1b	100	51.434	ENSMOCG00000017142	Smarcad1	85	56.674	Microtus_ochrogaster
ENSSFOG00015016814	smarcad1b	75	72.439	ENSMMOG00000000275	smarcad1a	99	72.439	Mola_mola
ENSSFOG00015016814	smarcad1b	100	51.253	ENSMODG00000019268	SMARCAD1	100	51.487	Monodelphis_domestica
ENSSFOG00015016814	smarcad1b	87	55.982	MGP_CAROLIEiJ_G0028458	-	67	55.982	Mus_caroli
ENSSFOG00015016814	smarcad1b	100	50.140	ENSMUSG00000029920	Smarcad1	100	50.470	Mus_musculus
ENSSFOG00015016814	smarcad1b	100	50.326	MGP_PahariEiJ_G0022198	Smarcad1	84	55.912	Mus_pahari
ENSSFOG00015016814	smarcad1b	100	50.326	MGP_SPRETEiJ_G0029462	Smarcad1	100	50.470	Mus_spretus
ENSSFOG00015016814	smarcad1b	100	50.139	ENSMPUG00000002111	SMARCAD1	100	50.140	Mustela_putorius_furo
ENSSFOG00015016814	smarcad1b	100	50.694	ENSMLUG00000000425	SMARCAD1	100	50.884	Myotis_lucifugus
ENSSFOG00015016814	smarcad1b	100	50.234	ENSNGAG00000000810	Smarcad1	85	55.312	Nannospalax_galili
ENSSFOG00015016814	smarcad1b	66	74.370	ENSNBRG00000012749	smarcad1a	91	66.877	Neolamprologus_brichardi
ENSSFOG00015016814	smarcad1b	100	50.324	ENSNLEG00000014225	SMARCAD1	99	68.013	Nomascus_leucogenys
ENSSFOG00015016814	smarcad1b	100	50.324	ENSODEG00000004334	SMARCAD1	100	50.233	Octodon_degus
ENSSFOG00015016814	smarcad1b	63	76.755	ENSONIG00000015059	smarcad1a	100	59.357	Oreochromis_niloticus
ENSSFOG00015016814	smarcad1b	82	58.907	ENSOANG00000013764	SMARCAD1	99	58.593	Ornithorhynchus_anatinus
ENSSFOG00015016814	smarcad1b	100	50.884	ENSOCUG00000017283	SMARCAD1	100	50.417	Oryctolagus_cuniculus
ENSSFOG00015016814	smarcad1b	90	75.643	ENSORLG00000004869	smarcad1a	86	75.187	Oryzias_latipes
ENSSFOG00015016814	smarcad1b	90	76.097	ENSORLG00020020569	smarcad1a	86	75.635	Oryzias_latipes_hni
ENSSFOG00015016814	smarcad1b	90	76.097	ENSORLG00015009045	smarcad1a	86	75.635	Oryzias_latipes_hsok
ENSSFOG00015016814	smarcad1b	89	75.680	ENSOMEG00000023032	smarcad1a	88	73.055	Oryzias_melastigma
ENSSFOG00015016814	smarcad1b	100	50.323	ENSOGAG00000011444	SMARCAD1	84	55.689	Otolemur_garnettii
ENSSFOG00015016814	smarcad1b	100	50.418	ENSOARG00000017851	SMARCAD1	100	50.514	Ovis_aries
ENSSFOG00015016814	smarcad1b	100	50.324	ENSPPAG00000035715	SMARCAD1	100	50.512	Pan_paniscus
ENSSFOG00015016814	smarcad1b	100	50.461	ENSPPRG00000024756	SMARCAD1	99	68.013	Panthera_pardus
ENSSFOG00015016814	smarcad1b	100	50.460	ENSPTIG00000017868	SMARCAD1	100	50.232	Panthera_tigris_altaica
ENSSFOG00015016814	smarcad1b	100	50.324	ENSPTRG00000023126	SMARCAD1	99	68.013	Pan_troglodytes
ENSSFOG00015016814	smarcad1b	100	49.446	ENSPANG00000019757	SMARCAD1	100	49.489	Papio_anubis
ENSSFOG00015016814	smarcad1b	96	53.414	ENSPSIG00000010255	SMARCAD1	84	56.278	Pelodiscus_sinensis
ENSSFOG00015016814	smarcad1b	63	70.266	ENSPMGG00000010735	smarcad1a	96	68.047	Periophthalmus_magnuspinnatus
ENSSFOG00015016814	smarcad1b	88	49.282	ENSPEMG00000001854	Smarcad1	86	48.508	Peromyscus_maniculatus_bairdii
ENSSFOG00015016814	smarcad1b	99	46.987	ENSPMAG00000003516	smarcad1a	99	46.679	Petromyzon_marinus
ENSSFOG00015016814	smarcad1b	80	58.759	ENSPCIG00000008137	SMARCAD1	96	58.759	Phascolarctos_cinereus
ENSSFOG00015016814	smarcad1b	95	73.882	ENSPFOG00000019116	smarcad1a	88	73.882	Poecilia_formosa
ENSSFOG00015016814	smarcad1b	95	74.026	ENSPLAG00000000108	smarcad1a	88	74.026	Poecilia_latipinna
ENSSFOG00015016814	smarcad1b	95	73.882	ENSPMEG00000009155	smarcad1a	88	73.882	Poecilia_mexicana
ENSSFOG00015016814	smarcad1b	95	74.240	ENSPREG00000018185	smarcad1a	88	74.240	Poecilia_reticulata
ENSSFOG00015016814	smarcad1b	100	50.092	ENSPPYG00000014935	SMARCAD1	100	49.816	Pongo_abelii
ENSSFOG00015016814	smarcad1b	66	55.917	ENSPCOG00000020478	SMARCAD1	75	55.769	Propithecus_coquereli
ENSSFOG00015016814	smarcad1b	88	55.702	ENSPVAG00000001760	SMARCAD1	84	55.702	Pteropus_vampyrus
ENSSFOG00015016814	smarcad1b	66	73.778	ENSPNYG00000010087	smarcad1a	89	68.016	Pundamilia_nyererei
ENSSFOG00015016814	smarcad1b	96	62.755	ENSPNAG00000010099	smarcad1b	98	62.921	Pygocentrus_nattereri
ENSSFOG00015016814	smarcad1b	100	59.188	ENSPNAG00000001663	smarcad1a	100	58.727	Pygocentrus_nattereri
ENSSFOG00015016814	smarcad1b	100	49.907	ENSRNOG00000006391	Smarcad1	84	55.507	Rattus_norvegicus
ENSSFOG00015016814	smarcad1b	100	50.416	ENSRBIG00000041989	SMARCAD1	100	50.466	Rhinopithecus_bieti
ENSSFOG00015016814	smarcad1b	100	50.416	ENSRROG00000035309	SMARCAD1	100	50.466	Rhinopithecus_roxellana
ENSSFOG00015016814	smarcad1b	100	50.602	ENSSBOG00000032114	SMARCAD1	99	68.182	Saimiri_boliviensis_boliviensis
ENSSFOG00015016814	smarcad1b	96	53.707	ENSSHAG00000001279	SMARCAD1	84	56.623	Sarcophilus_harrisii
ENSSFOG00015016814	smarcad1b	68	74.928	ENSSDUG00000022338	smarcad1a	82	74.928	Seriola_dumerili
ENSSFOG00015016814	smarcad1b	68	75.072	ENSSLDG00000024986	smarcad1a	100	58.672	Seriola_lalandi_dorsalis
ENSSFOG00015016814	smarcad1b	58	67.731	ENSSPUG00000004633	SMARCAD1	99	67.731	Sphenodon_punctatus
ENSSFOG00015016814	smarcad1b	92	75.902	ENSSPAG00000001970	smarcad1a	100	56.911	Stegastes_partitus
ENSSFOG00015016814	smarcad1b	100	50.604	ENSSSCG00000009193	SMARCAD1	100	56.009	Sus_scrofa
ENSSFOG00015016814	smarcad1b	80	58.780	ENSTGUG00000003127	SMARCAD1	100	59.268	Taeniopygia_guttata
ENSSFOG00015016814	smarcad1b	89	64.576	ENSTNIG00000017585	smarcad1a	99	65.155	Tetraodon_nigroviridis
ENSSFOG00015016814	smarcad1b	80	70.040	ENSTBEG00000002789	SMARCAD1	69	70.040	Tupaia_belangeri
ENSSFOG00015016814	smarcad1b	97	52.093	ENSTTRG00000000226	SMARCAD1	87	56.106	Tursiops_truncatus
ENSSFOG00015016814	smarcad1b	100	49.815	ENSUAMG00000022262	SMARCAD1	84	55.422	Ursus_americanus
ENSSFOG00015016814	smarcad1b	100	50.000	ENSUMAG00000004549	SMARCAD1	84	55.641	Ursus_maritimus
ENSSFOG00015016814	smarcad1b	100	50.046	ENSVVUG00000007271	SMARCAD1	100	55.355	Vulpes_vulpes
ENSSFOG00015016814	smarcad1b	89	51.641	ENSXETG00000019214	smarcad1	100	51.864	Xenopus_tropicalis
ENSSFOG00015016814	smarcad1b	79	66.167	ENSXCOG00000005232	smarcad1a	82	73.906	Xiphophorus_couchianus
ENSSFOG00015016814	smarcad1b	95	73.945	ENSXMAG00000015350	smarcad1a	87	73.945	Xiphophorus_maculatus