EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015017190 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3131 bases
Position: chrKV410902.1:890645-893775
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015026754	zf-CCCH	PF00642.24	9.4e-28	1	4
ENSSFOP00015026754	zf-CCCH	PF00642.24	9.4e-28	2	4
ENSSFOP00015026754	zf-CCCH	PF00642.24	9.4e-28	3	4
ENSSFOP00015026754	zf-CCCH	PF00642.24	9.4e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027056	-	933	-	ENSSFOP00015026754	310 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015017190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017190	cth1	65	61.836	ENSAPOG00000012552	cth1	94	53.287	Acanthochromis_polyacanthus
ENSSFOG00015017190	cth1	60	61.111	ENSACIG00000016026	cth1	87	52.901	Amphilophus_citrinellus
ENSSFOG00015017190	cth1	65	62.085	ENSAOCG00000001644	cth1	91	54.817	Amphiprion_ocellaris
ENSSFOG00015017190	cth1	65	62.085	ENSAPEG00000008930	cth1	91	54.817	Amphiprion_percula
ENSSFOG00015017190	cth1	90	57.966	ENSATEG00000002281	cth1	88	57.966	Anabas_testudineus
ENSSFOG00015017190	cth1	62	62.437	ENSACLG00000015353	cth1	90	55.556	Astatotilapia_calliptera
ENSSFOG00015017190	cth1	93	58.086	ENSAMXG00000025717	cth1	95	57.807	Astyanax_mexicanus
ENSSFOG00015017190	cth1	67	60.538	ENSCSEG00000014617	cth1	92	55.096	Cynoglossus_semilaevis
ENSSFOG00015017190	cth1	60	63.636	ENSCVAG00000001680	cth1	57	53.571	Cyprinodon_variegatus
ENSSFOG00015017190	cth1	85	55.088	ENSDARG00000057328	cth1	94	57.003	Danio_rerio
ENSSFOG00015017190	cth1	88	55.782	ENSELUG00000012738	cth1	93	53.165	Esox_lucius
ENSSFOG00015017190	cth1	87	50.709	ENSFHEG00000022665	cth1	90	51.505	Fundulus_heteroclitus
ENSSFOG00015017190	cth1	95	57.049	ENSGMOG00000007360	cth1	93	56.291	Gadus_morhua
ENSSFOG00015017190	cth1	86	52.688	ENSGAFG00000019288	cth1	86	52.500	Gambusia_affinis
ENSSFOG00015017190	cth1	94	51.645	ENSGACG00000000802	cth1	94	51.645	Gasterosteus_aculeatus
ENSSFOG00015017190	cth1	87	54.545	ENSHBUG00000014400	cth1	86	54.874	Haplochromis_burtoni
ENSSFOG00015017190	cth1	59	57.609	ENSHCOG00000010276	cth1	84	47.970	Hippocampus_comes
ENSSFOG00015017190	cth1	93	58.416	ENSIPUG00000018040	cth1	93	58.333	Ictalurus_punctatus
ENSSFOG00015017190	cth1	58	66.667	ENSKMAG00000005944	cth1	84	57.934	Kryptolebias_marmoratus
ENSSFOG00015017190	cth1	62	64.039	ENSLBEG00000019253	cth1	88	56.357	Labrus_bergylta
ENSSFOG00015017190	cth1	59	58.696	ENSLOCG00000002047	cth1	89	58.152	Lepisosteus_oculatus
ENSSFOG00015017190	cth1	56	61.081	ENSMAMG00000001525	cth1	92	44.729	Mastacembelus_armatus
ENSSFOG00015017190	cth1	62	62.437	ENSMZEG00005022335	cth1	86	54.874	Maylandia_zebra
ENSSFOG00015017190	cth1	68	56.696	ENSMMOG00000020518	cth1	97	51.792	Mola_mola
ENSSFOG00015017190	cth1	66	53.488	ENSMALG00000020738	cth1	53	55.189	Monopterus_albus
ENSSFOG00015017190	cth1	61	61.376	ENSNBRG00000022789	cth1	84	53.532	Neolamprologus_brichardi
ENSSFOG00015017190	cth1	62	60.099	ENSONIG00000021318	cth1	87	53.004	Oreochromis_niloticus
ENSSFOG00015017190	cth1	87	50.709	ENSORLG00000022847	cth1	91	52.508	Oryzias_latipes
ENSSFOG00015017190	cth1	87	50.883	ENSORLG00020011979	cth1	91	52.703	Oryzias_latipes_hni
ENSSFOG00015017190	cth1	80	50.965	ENSORLG00015013084	cth1	91	52.013	Oryzias_latipes_hsok
ENSSFOG00015017190	cth1	79	50.598	ENSOMEG00000005809	cth1	75	53.650	Oryzias_melastigma
ENSSFOG00015017190	cth1	95	61.688	ENSPKIG00000015883	cth1	93	63.961	Paramormyrops_kingsleyae
ENSSFOG00015017190	cth1	69	54.978	ENSPMGG00000004275	cth1	93	50.000	Periophthalmus_magnuspinnatus
ENSSFOG00015017190	cth1	87	54.874	ENSPFOG00000013583	cth1	81	56.727	Poecilia_formosa
ENSSFOG00015017190	cth1	87	54.513	ENSPLAG00000018158	cth1	81	56.364	Poecilia_latipinna
ENSSFOG00015017190	cth1	87	54.874	ENSPMEG00000005744	cth1	86	56.727	Poecilia_mexicana
ENSSFOG00015017190	cth1	87	55.596	ENSPREG00000004099	cth1	86	57.455	Poecilia_reticulata
ENSSFOG00015017190	cth1	62	62.500	ENSPNYG00000016705	cth1	87	55.431	Pundamilia_nyererei
ENSSFOG00015017190	cth1	99	56.656	ENSPNAG00000013147	cth1	98	55.728	Pygocentrus_nattereri
ENSSFOG00015017190	cth1	55	67.033	ENSSMAG00000007977	cth1	86	57.042	Scophthalmus_maximus
ENSSFOG00015017190	cth1	79	57.471	ENSSDUG00000004321	cth1	92	55.128	Seriola_dumerili
ENSSFOG00015017190	cth1	79	57.308	ENSSLDG00000010023	-	92	55.627	Seriola_lalandi_dorsalis
ENSSFOG00015017190	cth1	79	57.308	ENSSLDG00000012760	cth1	92	55.449	Seriola_lalandi_dorsalis
ENSSFOG00015017190	cth1	79	57.308	ENSSLDG00000004516	-	91	55.627	Seriola_lalandi_dorsalis
ENSSFOG00015017190	cth1	57	63.978	ENSSPAG00000018659	cth1	91	55.853	Stegastes_partitus
ENSSFOG00015017190	cth1	65	59.716	ENSTRUG00000012770	cth1	91	51.803	Takifugu_rubripes
ENSSFOG00015017190	cth1	94	51.148	ENSTNIG00000000740	cth1	91	51.780	Tetraodon_nigroviridis
ENSSFOG00015017190	cth1	84	53.462	ENSXCOG00000003710	cth1	89	53.462	Xiphophorus_couchianus
ENSSFOG00015017190	cth1	94	51.645	ENSXMAG00000023885	cth1	91	53.488	Xiphophorus_maculatus