EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017229 (Gene tree)
Gene ID: 108934822
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 24745 bases
Position: chrKV411083.1:79905-104649
Accession: 108934822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015026975	PAM2	PF07145.15	5.8e-06	1	1
ENSSFOP00015026951	PAM2	PF07145.15	6e-06	1	1
ENSSFOP00015026975	LsmAD	PF06741.13	8.5e-16	1	1
ENSSFOP00015026951	LsmAD	PF06741.13	8.6e-16	1	1
ENSSFOP00015026975	SM-ATX	PF14438.6	1.8e-18	1	1
ENSSFOP00015026951	SM-ATX	PF14438.6	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027284	-	3072	-	ENSSFOP00015026975	1023 (aa)	-	-
ENSSFOT00015027259	-	3096	XM_018752949	ENSSFOP00015026951	1031 (aa)	XP_018608465	-

Gene Model

Click here to download ENSSFOG00015017229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017229	atxn2	83	45.714	ENSSFOG00015001018	atxn2l	81	50.883
ENSSFOG00015017229	atxn2	60	52.416	ENSSFOG00015021588	-	70	52.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017229	atxn2	100	60.845	ENSG00000204842	ATXN2	90	72.727	Homo_sapiens
ENSSFOG00015017229	atxn2	100	60.731	ENSAMEG00000013747	ATXN2	98	61.106	Ailuropoda_melanoleuca
ENSSFOG00015017229	atxn2	99	62.383	ENSACIG00000004928	atxn2	100	64.755	Amphilophus_citrinellus
ENSSFOG00015017229	atxn2	99	62.894	ENSATEG00000018587	atxn2	100	65.381	Anabas_testudineus
ENSSFOG00015017229	atxn2	100	61.690	ENSAPLG00000008724	ATXN2	98	62.535	Anas_platyrhynchos
ENSSFOG00015017229	atxn2	100	57.354	ENSACAG00000002419	ATXN2	98	58.802	Anolis_carolinensis
ENSSFOG00015017229	atxn2	100	60.526	ENSANAG00000022522	ATXN2	100	60.497	Aotus_nancymaae
ENSSFOG00015017229	atxn2	99	63.662	ENSACLG00000013359	atxn2	97	63.467	Astatotilapia_calliptera
ENSSFOG00015017229	atxn2	93	80.427	ENSAMXG00000002342	atxn2	95	80.427	Astyanax_mexicanus
ENSSFOG00015017229	atxn2	100	60.902	ENSBTAG00000022069	ATXN2	100	61.878	Bos_taurus
ENSSFOG00015017229	atxn2	100	60.037	ENSCJAG00000011756	ATXN2	100	59.585	Callithrix_jacchus
ENSSFOG00015017229	atxn2	100	60.694	ENSCAFG00000008606	ATXN2	80	61.351	Canis_familiaris
ENSSFOG00015017229	atxn2	100	60.939	ENSCAFG00020017041	ATXN2	100	61.315	Canis_lupus_dingo
ENSSFOG00015017229	atxn2	100	60.882	ENSCHIG00000012141	ATXN2	81	62.137	Capra_hircus
ENSSFOG00015017229	atxn2	100	60.845	ENSTSYG00000002717	ATXN2	100	60.922	Carlito_syrichta
ENSSFOG00015017229	atxn2	65	54.964	ENSCAPG00000013332	ATXN2	100	53.143	Cavia_aperea
ENSSFOG00015017229	atxn2	100	60.882	ENSCPOG00000001390	ATXN2	99	59.236	Cavia_porcellus
ENSSFOG00015017229	atxn2	100	60.526	ENSCCAG00000026267	ATXN2	100	60.497	Cebus_capucinus
ENSSFOG00015017229	atxn2	100	60.845	ENSCATG00000017877	ATXN2	100	59.906	Cercocebus_atys
ENSSFOG00015017229	atxn2	100	61.064	ENSCLAG00000009324	ATXN2	99	59.039	Chinchilla_lanigera
ENSSFOG00015017229	atxn2	100	60.825	ENSCSAG00000002590	ATXN2	91	61.200	Chlorocebus_sabaeus
ENSSFOG00015017229	atxn2	78	65.072	ENSCHOG00000004284	ATXN2	81	65.072	Choloepus_hoffmanni
ENSSFOG00015017229	atxn2	100	55.089	ENSCPBG00000003465	ATXN2	100	55.159	Chrysemys_picta_bellii
ENSSFOG00015017229	atxn2	100	61.039	ENSCANG00000042302	ATXN2	100	60.718	Colobus_angolensis_palliatus
ENSSFOG00015017229	atxn2	100	58.575	ENSCGRG00001022603	Atxn2	82	58.294	Cricetulus_griseus_chok1gshd
ENSSFOG00015017229	atxn2	100	60.674	ENSCGRG00000015823	Atxn2	99	58.351	Cricetulus_griseus_crigri
ENSSFOG00015017229	atxn2	100	54.685	ENSCSEG00000018366	atxn2	87	79.286	Cynoglossus_semilaevis
ENSSFOG00015017229	atxn2	100	51.947	ENSCSEG00000009072	-	73	66.879	Cynoglossus_semilaevis
ENSSFOG00015017229	atxn2	98	72.086	ENSCVAG00000020160	atxn2	95	78.495	Cyprinodon_variegatus
ENSSFOG00015017229	atxn2	100	64.365	ENSDARG00000052897	atxn2	95	65.009	Danio_rerio
ENSSFOG00015017229	atxn2	100	60.262	ENSDNOG00000015696	ATXN2	100	59.529	Dasypus_novemcinctus
ENSSFOG00015017229	atxn2	90	62.472	ENSDORG00000000808	Atxn2	98	55.790	Dipodomys_ordii
ENSSFOG00015017229	atxn2	92	60.630	ENSETEG00000005224	ATXN2	73	62.598	Echinops_telfairi
ENSSFOG00015017229	atxn2	100	61.230	ENSEASG00005012077	ATXN2	100	60.902	Equus_asinus_asinus
ENSSFOG00015017229	atxn2	100	61.106	ENSECAG00000014347	ATXN2	78	61.465	Equus_caballus
ENSSFOG00015017229	atxn2	71	69.366	ENSEEUG00000014635	-	69	69.366	Erinaceus_europaeus
ENSSFOG00015017229	atxn2	99	61.985	ENSELUG00000019632	atxn2	94	75.958	Esox_lucius
ENSSFOG00015017229	atxn2	100	61.127	ENSFCAG00000003178	ATXN2	100	60.509	Felis_catus
ENSSFOG00015017229	atxn2	100	59.735	ENSFALG00000009001	ATXN2	100	60.491	Ficedula_albicollis
ENSSFOG00015017229	atxn2	100	60.788	ENSFDAG00000020942	ATXN2	98	61.163	Fukomys_damarensis
ENSSFOG00015017229	atxn2	91	67.395	ENSGMOG00000007412	atxn2	89	68.124	Gadus_morhua
ENSSFOG00015017229	atxn2	100	58.579	ENSGALG00000004625	ATXN2	100	58.592	Gallus_gallus
ENSSFOG00015017229	atxn2	99	65.075	ENSGAFG00000003302	atxn2	94	80.000	Gambusia_affinis
ENSSFOG00015017229	atxn2	100	62.271	ENSGACG00000006295	atxn2	99	64.352	Gasterosteus_aculeatus
ENSSFOG00015017229	atxn2	100	54.206	ENSGAGG00000005014	ATXN2	100	55.098	Gopherus_agassizii
ENSSFOG00015017229	atxn2	100	60.971	ENSGGOG00000002137	ATXN2	100	61.293	Gorilla_gorilla
ENSSFOG00015017229	atxn2	99	56.917	ENSHBUG00000002921	atxn2	87	81.071	Haplochromis_burtoni
ENSSFOG00015017229	atxn2	100	58.083	ENSHGLG00000009812	ATXN2	82	59.387	Heterocephalus_glaber_female
ENSSFOG00015017229	atxn2	100	60.939	ENSHGLG00100019351	ATXN2	98	61.502	Heterocephalus_glaber_male
ENSSFOG00015017229	atxn2	96	72.586	ENSHCOG00000005278	atxn2	92	76.552	Hippocampus_comes
ENSSFOG00015017229	atxn2	100	60.731	ENSSTOG00000000978	ATXN2	99	59.491	Ictidomys_tridecemlineatus
ENSSFOG00015017229	atxn2	57	63.577	ENSLBEG00000017484	atxn2	96	62.758	Labrus_bergylta
ENSSFOG00015017229	atxn2	52	67.577	ENSLACG00000012531	ATXN2	98	63.483	Latimeria_chalumnae
ENSSFOG00015017229	atxn2	98	73.333	ENSLOCG00000007880	atxn2	95	71.725	Lepisosteus_oculatus
ENSSFOG00015017229	atxn2	100	61.336	ENSLAFG00000007416	ATXN2	98	61.776	Loxodonta_africana
ENSSFOG00015017229	atxn2	100	60.845	ENSMFAG00000000374	ATXN2	100	60.810	Macaca_fascicularis
ENSSFOG00015017229	atxn2	100	60.825	ENSMMUG00000002226	ATXN2	100	61.200	Macaca_mulatta
ENSSFOG00015017229	atxn2	100	60.845	ENSMNEG00000035588	ATXN2	100	60.810	Macaca_nemestrina
ENSSFOG00015017229	atxn2	100	60.845	ENSMLEG00000024324	ATXN2	100	60.810	Mandrillus_leucophaeus
ENSSFOG00015017229	atxn2	99	57.261	ENSMZEG00005008476	atxn2	87	81.071	Maylandia_zebra
ENSSFOG00015017229	atxn2	100	60.951	ENSMGAG00000005288	ATXN2	98	62.002	Meleagris_gallopavo
ENSSFOG00015017229	atxn2	65	54.779	ENSMAUG00000008223	-	100	53.714	Mesocricetus_auratus
ENSSFOG00015017229	atxn2	100	61.234	ENSMICG00000013541	ATXN2	100	61.553	Microcebus_murinus
ENSSFOG00015017229	atxn2	86	58.785	ENSMOCG00000005219	Atxn2	99	57.608	Microtus_ochrogaster
ENSSFOG00015017229	atxn2	96	76.515	ENSMMOG00000013189	atxn2	100	66.299	Mola_mola
ENSSFOG00015017229	atxn2	100	61.359	ENSMODG00000012221	ATXN2	82	61.610	Monodelphis_domestica
ENSSFOG00015017229	atxn2	99	57.880	ENSMALG00000018529	atxn2	94	80.357	Monopterus_albus
ENSSFOG00015017229	atxn2	100	60.298	MGP_CAROLIEiJ_G0027692	Atxn2	97	62.185	Mus_caroli
ENSSFOG00015017229	atxn2	100	60.804	ENSMUSG00000042605	Atxn2	97	63.866	Mus_musculus
ENSSFOG00015017229	atxn2	100	54.597	MGP_PahariEiJ_G0024272	Atxn2	100	54.066	Mus_pahari
ENSSFOG00015017229	atxn2	100	60.243	MGP_SPRETEiJ_G0028690	Atxn2	97	62.185	Mus_spretus
ENSSFOG00015017229	atxn2	100	59.231	ENSMPUG00000002212	ATXN2	98	59.606	Mustela_putorius_furo
ENSSFOG00015017229	atxn2	100	59.513	ENSMLUG00000015559	ATXN2	98	60.768	Myotis_lucifugus
ENSSFOG00015017229	atxn2	99	64.672	ENSNBRG00000015794	atxn2	99	66.919	Neolamprologus_brichardi
ENSSFOG00015017229	atxn2	100	60.845	ENSNLEG00000000484	ATXN2	100	60.810	Nomascus_leucogenys
ENSSFOG00015017229	atxn2	86	77.143	ENSMEUG00000012244	-	84	77.143	Notamacropus_eugenii
ENSSFOG00015017229	atxn2	100	57.860	ENSOPRG00000014599	ATXN2	99	58.685	Ochotona_princeps
ENSSFOG00015017229	atxn2	100	60.598	ENSODEG00000010798	ATXN2	100	60.825	Octodon_degus
ENSSFOG00015017229	atxn2	99	63.577	ENSONIG00000014521	atxn2	96	66.327	Oreochromis_niloticus
ENSSFOG00015017229	atxn2	88	60.487	ENSOANG00000004796	ATXN2	100	61.040	Ornithorhynchus_anatinus
ENSSFOG00015017229	atxn2	100	59.495	ENSOCUG00000002855	ATXN2	69	59.415	Oryctolagus_cuniculus
ENSSFOG00015017229	atxn2	99	57.223	ENSORLG00000003606	atxn2	95	59.475	Oryzias_latipes
ENSSFOG00015017229	atxn2	99	57.236	ENSORLG00020000785	atxn2	94	77.544	Oryzias_latipes_hni
ENSSFOG00015017229	atxn2	99	56.906	ENSORLG00015012345	atxn2	94	77.544	Oryzias_latipes_hsok
ENSSFOG00015017229	atxn2	100	60.898	ENSOGAG00000000609	ATXN2	81	61.221	Otolemur_garnettii
ENSSFOG00015017229	atxn2	100	60.882	ENSOARG00000018223	ATXN2	98	61.746	Ovis_aries
ENSSFOG00015017229	atxn2	100	60.845	ENSPPAG00000028043	ATXN2	100	61.200	Pan_paniscus
ENSSFOG00015017229	atxn2	100	61.127	ENSPPRG00000003573	ATXN2	100	60.509	Panthera_pardus
ENSSFOG00015017229	atxn2	100	61.127	ENSPTIG00000021122	ATXN2	100	61.798	Panthera_tigris_altaica
ENSSFOG00015017229	atxn2	100	60.845	ENSPTRG00000029540	ATXN2	100	61.200	Pan_troglodytes
ENSSFOG00015017229	atxn2	100	60.845	ENSPANG00000017168	ATXN2	100	60.810	Papio_anubis
ENSSFOG00015017229	atxn2	95	82.105	ENSPKIG00000023134	atxn2	94	82.105	Paramormyrops_kingsleyae
ENSSFOG00015017229	atxn2	100	61.985	ENSPSIG00000002353	-	98	62.266	Pelodiscus_sinensis
ENSSFOG00015017229	atxn2	100	62.123	ENSPMGG00000005074	atxn2	100	63.686	Periophthalmus_magnuspinnatus
ENSSFOG00015017229	atxn2	86	58.894	ENSPEMG00000015340	Atxn2	99	58.581	Peromyscus_maniculatus_bairdii
ENSSFOG00015017229	atxn2	56	53.041	ENSPMAG00000007157	atxn2	70	58.203	Petromyzon_marinus
ENSSFOG00015017229	atxn2	70	49.383	ENSPMAG00000004603	atxn2	71	53.287	Petromyzon_marinus
ENSSFOG00015017229	atxn2	63	57.703	ENSPCIG00000006165	-	99	58.454	Phascolarctos_cinereus
ENSSFOG00015017229	atxn2	86	70.924	ENSPFOG00000005857	atxn2	95	59.062	Poecilia_formosa
ENSSFOG00015017229	atxn2	100	57.196	ENSPLAG00000015241	atxn2	95	79.643	Poecilia_latipinna
ENSSFOG00015017229	atxn2	100	57.090	ENSPMEG00000016681	atxn2	95	79.643	Poecilia_mexicana
ENSSFOG00015017229	atxn2	100	66.268	ENSPREG00000014825	atxn2	95	78.596	Poecilia_reticulata
ENSSFOG00015017229	atxn2	100	60.845	ENSPPYG00000004963	ATXN2	84	61.502	Pongo_abelii
ENSSFOG00015017229	atxn2	62	56.461	ENSPCAG00000004216	-	51	84.615	Procavia_capensis
ENSSFOG00015017229	atxn2	99	60.302	ENSPCOG00000022031	ATXN2	100	60.938	Propithecus_coquereli
ENSSFOG00015017229	atxn2	93	69.366	ENSPVAG00000013179	ATXN2	75	68.990	Pteropus_vampyrus
ENSSFOG00015017229	atxn2	58	58.871	ENSPNYG00000016981	atxn2	93	72.545	Pundamilia_nyererei
ENSSFOG00015017229	atxn2	94	78.322	ENSPNAG00000010889	atxn2	94	79.715	Pygocentrus_nattereri
ENSSFOG00015017229	atxn2	100	60.413	ENSRNOG00000001256	Atxn2	97	60.316	Rattus_norvegicus
ENSSFOG00015017229	atxn2	100	59.522	ENSRBIG00000039212	ATXN2	100	59.982	Rhinopithecus_bieti
ENSSFOG00015017229	atxn2	100	60.657	ENSRROG00000031170	ATXN2	100	60.626	Rhinopithecus_roxellana
ENSSFOG00015017229	atxn2	100	60.129	ENSSBOG00000031563	ATXN2	100	60.589	Saimiri_boliviensis_boliviensis
ENSSFOG00015017229	atxn2	100	61.183	ENSSHAG00000007304	ATXN2	98	61.039	Sarcophilus_harrisii
ENSSFOG00015017229	atxn2	99	63.148	ENSSMAG00000004627	atxn2	95	80.351	Scophthalmus_maximus
ENSSFOG00015017229	atxn2	100	58.639	ENSSDUG00000001223	atxn2	95	82.500	Seriola_dumerili
ENSSFOG00015017229	atxn2	99	66.008	ENSSLDG00000019837	atxn2	100	67.383	Seriola_lalandi_dorsalis
ENSSFOG00015017229	atxn2	71	71.364	ENSSARG00000006291	ATXN2	69	71.681	Sorex_araneus
ENSSFOG00015017229	atxn2	100	61.096	ENSSPUG00000010317	ATXN2	91	61.567	Sphenodon_punctatus
ENSSFOG00015017229	atxn2	94	82.143	ENSSPAG00000000377	atxn2	93	82.143	Stegastes_partitus
ENSSFOG00015017229	atxn2	100	60.865	ENSSSCG00000009834	ATXN2	92	61.054	Sus_scrofa
ENSSFOG00015017229	atxn2	100	54.486	ENSTGUG00000006497	ATXN2	68	57.222	Taeniopygia_guttata
ENSSFOG00015017229	atxn2	99	60.507	ENSTRUG00000016801	atxn2	94	77.273	Takifugu_rubripes
ENSSFOG00015017229	atxn2	87	69.725	ENSTBEG00000001985	ATXN2	87	69.725	Tupaia_belangeri
ENSSFOG00015017229	atxn2	90	63.158	ENSTTRG00000000952	ATXN2	74	62.731	Tursiops_truncatus
ENSSFOG00015017229	atxn2	100	60.751	ENSUAMG00000025295	ATXN2	92	61.127	Ursus_americanus
ENSSFOG00015017229	atxn2	100	60.751	ENSUMAG00000007315	ATXN2	100	61.127	Ursus_maritimus
ENSSFOG00015017229	atxn2	92	65.385	ENSVPAG00000005940	ATXN2	91	67.376	Vicugna_pacos
ENSSFOG00015017229	atxn2	100	60.825	ENSVVUG00000016107	ATXN2	100	61.200	Vulpes_vulpes
ENSSFOG00015017229	atxn2	99	57.183	ENSXETG00000020912	atxn2	99	57.556	Xenopus_tropicalis
ENSSFOG00015017229	atxn2	56	62.418	ENSXCOG00000010001	atxn2	98	63.531	Xiphophorus_couchianus
ENSSFOG00015017229	atxn2	100	57.445	ENSXMAG00000003481	atxn2	95	80.000	Xiphophorus_maculatus