EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017283 (Gene tree)
Gene ID: 108925028
Gene Symbol: sub1b (1 of many)
Alias: rpo2tc1|sub1|zgc:92831
Full Name: activated RNA polymerase II transcriptional coactivator p15-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4526 bases
Position: chrKV410839.1:2875839-2880364
Accession: 108925028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015026888	PC4	PF02229.16	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027196	-	2812	XM_018736730	ENSSFOP00015026888	125 (aa)	XP_018592246	A0A0P7YCH9

Gene Model

Click here to download ENSSFOG00015017283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017283	sub1b	100	74.016	ENSSFOG00015018386	sub1b	100	80.315

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017283	sub1b	100	70.079	ENSG00000113387	SUB1	100	74.803	Homo_sapiens
ENSSFOG00015017283	sub1b	100	77.600	ENSAPOG00000005917	SUB1	100	77.600	Acanthochromis_polyacanthus
ENSSFOG00015017283	sub1b	100	70.079	ENSAMEG00000006238	SUB1	95	74.803	Ailuropoda_melanoleuca
ENSSFOG00015017283	sub1b	100	80.800	ENSACIG00000015976	sub1b	100	80.800	Amphilophus_citrinellus
ENSSFOG00015017283	sub1b	92	75.652	ENSAOCG00000007313	-	89	75.652	Amphiprion_ocellaris
ENSSFOG00015017283	sub1b	84	72.381	ENSAOCG00000002323	-	79	77.083	Amphiprion_ocellaris
ENSSFOG00015017283	sub1b	50	76.190	ENSAPEG00000014618	-	60	76.190	Amphiprion_percula
ENSSFOG00015017283	sub1b	76	76.842	ENSAPEG00000017151	-	74	77.895	Amphiprion_percula
ENSSFOG00015017283	sub1b	100	80.000	ENSAPEG00000024347	sub1b	100	80.000	Amphiprion_percula
ENSSFOG00015017283	sub1b	100	80.800	ENSATEG00000010340	sub1b	100	80.800	Anabas_testudineus
ENSSFOG00015017283	sub1b	100	66.917	ENSACAG00000007974	SUB1	100	70.677	Anolis_carolinensis
ENSSFOG00015017283	sub1b	100	70.079	ENSANAG00000011651	-	100	74.803	Aotus_nancymaae
ENSSFOG00015017283	sub1b	100	69.841	ENSANAG00000023392	-	83	73.016	Aotus_nancymaae
ENSSFOG00015017283	sub1b	100	80.800	ENSACLG00000016875	sub1b	64	80.800	Astatotilapia_calliptera
ENSSFOG00015017283	sub1b	100	75.397	ENSAMXG00000037104	sub1b	100	75.397	Astyanax_mexicanus
ENSSFOG00015017283	sub1b	100	70.079	ENSBTAG00000021965	SUB1	100	74.803	Bos_taurus
ENSSFOG00015017283	sub1b	51	53.030	WBGene00011743	T13F2.2	96	40.336	Caenorhabditis_elegans
ENSSFOG00015017283	sub1b	80	66.667	ENSCJAG00000018718	SUB1	98	72.549	Callithrix_jacchus
ENSSFOG00015017283	sub1b	100	70.079	ENSCAFG00000016713	-	96	74.803	Canis_familiaris
ENSSFOG00015017283	sub1b	100	69.048	ENSCAFG00000024488	-	100	70.635	Canis_familiaris
ENSSFOG00015017283	sub1b	100	70.079	ENSCAFG00000018879	-	88	74.803	Canis_familiaris
ENSSFOG00015017283	sub1b	100	70.079	ENSCAFG00020016840	-	100	74.803	Canis_lupus_dingo
ENSSFOG00015017283	sub1b	100	68.750	ENSCAFG00020011479	-	77	73.438	Canis_lupus_dingo
ENSSFOG00015017283	sub1b	100	70.079	ENSCHIG00000008460	SUB1	100	74.803	Capra_hircus
ENSSFOG00015017283	sub1b	100	70.079	ENSTSYG00000029948	-	100	74.803	Carlito_syrichta
ENSSFOG00015017283	sub1b	100	64.615	ENSTSYG00000014069	-	93	70.000	Carlito_syrichta
ENSSFOG00015017283	sub1b	100	61.417	ENSTSYG00000035366	-	83	66.142	Carlito_syrichta
ENSSFOG00015017283	sub1b	100	70.079	ENSCPOG00000031334	SUB1	100	74.803	Cavia_porcellus
ENSSFOG00015017283	sub1b	100	61.905	ENSCCAG00000017043	-	93	65.079	Cebus_capucinus
ENSSFOG00015017283	sub1b	100	66.929	ENSCCAG00000020604	-	100	70.079	Cebus_capucinus
ENSSFOG00015017283	sub1b	100	66.142	ENSCCAG00000033751	-	95	70.866	Cebus_capucinus
ENSSFOG00015017283	sub1b	100	70.079	ENSCCAG00000023605	-	100	74.803	Cebus_capucinus
ENSSFOG00015017283	sub1b	100	70.079	ENSCATG00000031199	SUB1	100	74.803	Cercocebus_atys
ENSSFOG00015017283	sub1b	100	68.750	ENSCLAG00000007522	SUB1	100	74.219	Chinchilla_lanigera
ENSSFOG00015017283	sub1b	100	70.079	ENSCSAG00000017172	-	100	74.803	Chlorocebus_sabaeus
ENSSFOG00015017283	sub1b	100	69.291	ENSCSAG00000019449	-	100	71.654	Chlorocebus_sabaeus
ENSSFOG00015017283	sub1b	100	73.016	ENSCPBG00000024218	SUB1	79	75.397	Chrysemys_picta_bellii
ENSSFOG00015017283	sub1b	100	58.730	ENSCANG00000028665	-	90	61.905	Colobus_angolensis_palliatus
ENSSFOG00015017283	sub1b	100	70.079	ENSCANG00000029372	SUB1	100	74.803	Colobus_angolensis_palliatus
ENSSFOG00015017283	sub1b	100	68.504	ENSCGRG00001003473	-	100	73.228	Cricetulus_griseus_chok1gshd
ENSSFOG00015017283	sub1b	100	61.905	ENSCGRG00001014660	-	100	62.992	Cricetulus_griseus_chok1gshd
ENSSFOG00015017283	sub1b	70	69.318	ENSCGRG00001016254	-	100	60.938	Cricetulus_griseus_chok1gshd
ENSSFOG00015017283	sub1b	100	68.504	ENSCGRG00000001133	-	100	73.228	Cricetulus_griseus_crigri
ENSSFOG00015017283	sub1b	100	57.480	ENSCGRG00000001489	-	100	62.205	Cricetulus_griseus_crigri
ENSSFOG00015017283	sub1b	100	61.905	ENSCGRG00000019368	-	100	62.992	Cricetulus_griseus_crigri
ENSSFOG00015017283	sub1b	99	79.839	ENSDARG00000053446	sub1a	99	80.645	Danio_rerio
ENSSFOG00015017283	sub1b	100	74.400	ENSDARG00000007720	sub1b	100	74.400	Danio_rerio
ENSSFOG00015017283	sub1b	100	69.291	ENSDNOG00000040794	-	100	74.016	Dasypus_novemcinctus
ENSSFOG00015017283	sub1b	100	68.504	ENSDNOG00000032396	-	100	73.228	Dasypus_novemcinctus
ENSSFOG00015017283	sub1b	100	70.079	ENSDORG00000013916	Sub1	100	74.803	Dipodomys_ordii
ENSSFOG00015017283	sub1b	80	59.223	ENSEBUG00000008746	sub1a	76	48.611	Eptatretus_burgeri
ENSSFOG00015017283	sub1b	100	70.079	ENSEASG00005007099	SUB1	100	74.803	Equus_asinus_asinus
ENSSFOG00015017283	sub1b	100	70.079	ENSECAG00000012399	SUB1	100	74.803	Equus_caballus
ENSSFOG00015017283	sub1b	81	79.412	ENSEEUG00000000436	SUB1	99	81.373	Erinaceus_europaeus
ENSSFOG00015017283	sub1b	100	70.079	ENSFCAG00000037288	SUB1	100	74.803	Felis_catus
ENSSFOG00015017283	sub1b	100	73.016	ENSFALG00000002143	SUB1	87	75.397	Ficedula_albicollis
ENSSFOG00015017283	sub1b	100	70.079	ENSFDAG00000017179	SUB1	100	74.803	Fukomys_damarensis
ENSSFOG00015017283	sub1b	100	73.810	ENSGALG00000003248	SUB1	100	76.190	Gallus_gallus
ENSSFOG00015017283	sub1b	100	50.000	ENSGALG00000027147	-	100	50.000	Gallus_gallus
ENSSFOG00015017283	sub1b	100	73.016	ENSGALG00000034905	-	100	75.397	Gallus_gallus
ENSSFOG00015017283	sub1b	100	76.800	ENSGACG00000003912	sub1b	100	76.800	Gasterosteus_aculeatus
ENSSFOG00015017283	sub1b	100	73.016	ENSGAGG00000013535	SUB1	100	75.397	Gopherus_agassizii
ENSSFOG00015017283	sub1b	100	70.079	ENSGGOG00000040900	SUB1	100	74.803	Gorilla_gorilla
ENSSFOG00015017283	sub1b	99	71.774	ENSHBUG00000013953	sub1b	77	82.524	Haplochromis_burtoni
ENSSFOG00015017283	sub1b	100	70.079	ENSHGLG00000006749	SUB1	100	74.803	Heterocephalus_glaber_female
ENSSFOG00015017283	sub1b	100	70.079	ENSHGLG00100014344	SUB1	100	74.803	Heterocephalus_glaber_male
ENSSFOG00015017283	sub1b	100	71.200	ENSHCOG00000001809	sub1b	100	71.200	Hippocampus_comes
ENSSFOG00015017283	sub1b	100	74.219	ENSIPUG00000024367	SUB1	100	74.219	Ictalurus_punctatus
ENSSFOG00015017283	sub1b	100	76.800	ENSIPUG00000008166	sub1	100	76.800	Ictalurus_punctatus
ENSSFOG00015017283	sub1b	100	70.079	ENSSTOG00000019364	SUB1	100	74.803	Ictidomys_tridecemlineatus
ENSSFOG00015017283	sub1b	100	66.929	ENSJJAG00000018885	Sub1	100	70.079	Jaculus_jaculus
ENSSFOG00015017283	sub1b	99	74.194	ENSLBEG00000010728	sub1b	99	74.194	Labrus_bergylta
ENSSFOG00015017283	sub1b	52	83.077	ENSLACG00000001068	SUB1	100	83.077	Latimeria_chalumnae
ENSSFOG00015017283	sub1b	100	81.600	ENSLOCG00000006692	sub1b	100	81.600	Lepisosteus_oculatus
ENSSFOG00015017283	sub1b	100	70.866	ENSLAFG00000011006	-	100	74.803	Loxodonta_africana
ENSSFOG00015017283	sub1b	100	70.866	ENSLAFG00000032088	-	100	74.803	Loxodonta_africana
ENSSFOG00015017283	sub1b	100	62.205	ENSMFAG00000045643	-	61	66.142	Macaca_fascicularis
ENSSFOG00015017283	sub1b	100	70.079	ENSMFAG00000040728	SUB1	100	74.803	Macaca_fascicularis
ENSSFOG00015017283	sub1b	100	70.079	ENSMMUG00000046181	SUB1	100	74.803	Macaca_mulatta
ENSSFOG00015017283	sub1b	100	70.079	ENSMNEG00000037046	SUB1	100	74.803	Macaca_nemestrina
ENSSFOG00015017283	sub1b	100	70.079	ENSMLEG00000037017	-	100	74.803	Mandrillus_leucophaeus
ENSSFOG00015017283	sub1b	100	68.504	ENSMLEG00000030509	-	94	72.441	Mandrillus_leucophaeus
ENSSFOG00015017283	sub1b	100	57.143	ENSMLEG00000043436	-	90	60.317	Mandrillus_leucophaeus
ENSSFOG00015017283	sub1b	100	79.200	ENSMAMG00000018428	sub1b	100	79.200	Mastacembelus_armatus
ENSSFOG00015017283	sub1b	100	80.800	ENSMZEG00005021252	sub1b	100	80.800	Maylandia_zebra
ENSSFOG00015017283	sub1b	100	73.810	ENSMGAG00000002906	SUB1	100	76.190	Meleagris_gallopavo
ENSSFOG00015017283	sub1b	65	59.259	ENSMGAG00000001200	-	95	50.000	Meleagris_gallopavo
ENSSFOG00015017283	sub1b	100	68.504	ENSMAUG00000020232	Sub1	100	73.228	Mesocricetus_auratus
ENSSFOG00015017283	sub1b	100	70.079	ENSMICG00000014535	SUB1	100	74.803	Microcebus_murinus
ENSSFOG00015017283	sub1b	100	61.905	ENSMOCG00000016424	-	100	63.780	Microtus_ochrogaster
ENSSFOG00015017283	sub1b	100	69.291	ENSMOCG00000018930	-	100	74.016	Microtus_ochrogaster
ENSSFOG00015017283	sub1b	100	66.906	ENSMODG00000020410	SUB1	100	69.784	Monodelphis_domestica
ENSSFOG00015017283	sub1b	100	80.000	ENSMALG00000007163	sub1b	81	80.000	Monopterus_albus
ENSSFOG00015017283	sub1b	100	68.504	MGP_CAROLIEiJ_G0019676	Sub1	100	73.228	Mus_caroli
ENSSFOG00015017283	sub1b	100	69.291	ENSMUSG00000022205	Sub1	100	74.016	Mus_musculus
ENSSFOG00015017283	sub1b	100	67.717	MGP_PahariEiJ_G0016056	Sub1	100	72.441	Mus_pahari
ENSSFOG00015017283	sub1b	100	69.291	MGP_SPRETEiJ_G0020573	Sub1	100	74.016	Mus_spretus
ENSSFOG00015017283	sub1b	100	69.291	ENSMPUG00000018418	-	100	74.016	Mustela_putorius_furo
ENSSFOG00015017283	sub1b	100	70.079	ENSMPUG00000015185	-	100	74.803	Mustela_putorius_furo
ENSSFOG00015017283	sub1b	100	68.504	ENSMLUG00000009236	-	95	71.654	Myotis_lucifugus
ENSSFOG00015017283	sub1b	100	71.654	ENSMLUG00000013685	-	95	76.378	Myotis_lucifugus
ENSSFOG00015017283	sub1b	100	68.504	ENSNGAG00000014072	-	100	73.228	Nannospalax_galili
ENSSFOG00015017283	sub1b	100	66.667	ENSNGAG00000010782	-	84	69.048	Nannospalax_galili
ENSSFOG00015017283	sub1b	100	64.800	ENSNGAG00000017212	-	100	67.460	Nannospalax_galili
ENSSFOG00015017283	sub1b	82	81.553	ENSNBRG00000008451	sub1b	84	81.553	Neolamprologus_brichardi
ENSSFOG00015017283	sub1b	100	69.291	ENSNLEG00000036068	SUB1	100	74.016	Nomascus_leucogenys
ENSSFOG00015017283	sub1b	82	75.728	ENSNLEG00000035968	-	100	70.635	Nomascus_leucogenys
ENSSFOG00015017283	sub1b	100	70.079	ENSNLEG00000018383	-	95	74.803	Nomascus_leucogenys
ENSSFOG00015017283	sub1b	100	73.810	ENSMEUG00000007770	SUB1	100	76.984	Notamacropus_eugenii
ENSSFOG00015017283	sub1b	100	68.504	ENSOPRG00000012887	SUB1	100	73.228	Ochotona_princeps
ENSSFOG00015017283	sub1b	100	70.079	ENSODEG00000001937	-	100	74.803	Octodon_degus
ENSSFOG00015017283	sub1b	82	75.000	ENSODEG00000015114	-	99	71.545	Octodon_degus
ENSSFOG00015017283	sub1b	82	75.962	ENSODEG00000014558	-	84	70.866	Octodon_degus
ENSSFOG00015017283	sub1b	100	74.603	ENSOANG00000002328	SUB1	95	77.778	Ornithorhynchus_anatinus
ENSSFOG00015017283	sub1b	100	70.079	ENSOCUG00000006262	SUB1	60	74.803	Oryctolagus_cuniculus
ENSSFOG00015017283	sub1b	98	69.355	ENSOGAG00000000337	-	100	74.194	Otolemur_garnettii
ENSSFOG00015017283	sub1b	100	70.079	ENSOGAG00000009012	-	100	74.803	Otolemur_garnettii
ENSSFOG00015017283	sub1b	100	70.079	ENSOARG00000012154	SUB1	100	74.803	Ovis_aries
ENSSFOG00015017283	sub1b	100	70.079	ENSPPAG00000011212	SUB1	100	74.803	Pan_paniscus
ENSSFOG00015017283	sub1b	100	70.079	ENSPPRG00000008557	SUB1	100	74.803	Panthera_pardus
ENSSFOG00015017283	sub1b	100	70.079	ENSPTIG00000009466	SUB1	100	74.803	Panthera_tigris_altaica
ENSSFOG00015017283	sub1b	100	70.079	ENSPTRG00000048895	SUB1	100	74.803	Pan_troglodytes
ENSSFOG00015017283	sub1b	100	65.354	ENSPTRG00000041644	-	100	70.866	Pan_troglodytes
ENSSFOG00015017283	sub1b	100	70.079	ENSPANG00000000339	-	97	74.803	Papio_anubis
ENSSFOG00015017283	sub1b	100	68.504	ENSPANG00000000672	-	91	72.441	Papio_anubis
ENSSFOG00015017283	sub1b	100	59.524	ENSPANG00000033272	-	90	60.317	Papio_anubis
ENSSFOG00015017283	sub1b	100	70.079	ENSPANG00000002644	-	95	74.803	Papio_anubis
ENSSFOG00015017283	sub1b	100	67.460	ENSPANG00000035601	-	100	70.079	Papio_anubis
ENSSFOG00015017283	sub1b	100	79.200	ENSPKIG00000016923	sub1b	100	79.200	Paramormyrops_kingsleyae
ENSSFOG00015017283	sub1b	100	72.222	ENSPSIG00000005731	SUB1	95	74.603	Pelodiscus_sinensis
ENSSFOG00015017283	sub1b	100	73.810	ENSPCIG00000020907	-	100	76.984	Phascolarctos_cinereus
ENSSFOG00015017283	sub1b	100	69.841	ENSPCIG00000020827	-	100	71.429	Phascolarctos_cinereus
ENSSFOG00015017283	sub1b	100	67.717	ENSPPYG00000018347	-	100	73.228	Pongo_abelii
ENSSFOG00015017283	sub1b	100	70.079	ENSPPYG00000015379	SUB1	100	74.803	Pongo_abelii
ENSSFOG00015017283	sub1b	100	70.079	ENSPCOG00000014391	SUB1	100	74.803	Propithecus_coquereli
ENSSFOG00015017283	sub1b	100	70.866	ENSPVAG00000004785	SUB1	100	75.591	Pteropus_vampyrus
ENSSFOG00015017283	sub1b	100	80.800	ENSPNYG00000010975	sub1b	100	80.800	Pundamilia_nyererei
ENSSFOG00015017283	sub1b	99	77.419	ENSPNAG00000005998	sub1b	99	77.419	Pygocentrus_nattereri
ENSSFOG00015017283	sub1b	100	73.810	ENSPNAG00000008693	sub1a	100	74.603	Pygocentrus_nattereri
ENSSFOG00015017283	sub1b	100	69.291	ENSRNOG00000050563	Sub1	100	74.016	Rattus_norvegicus
ENSSFOG00015017283	sub1b	100	69.048	ENSRBIG00000031233	SUB1	100	72.441	Rhinopithecus_bieti
ENSSFOG00015017283	sub1b	100	70.079	ENSRROG00000040438	SUB1	100	74.803	Rhinopithecus_roxellana
ENSSFOG00015017283	sub1b	100	65.873	ENSRROG00000042718	-	90	69.048	Rhinopithecus_roxellana
ENSSFOG00015017283	sub1b	100	70.079	ENSSBOG00000026994	SUB1	100	74.803	Saimiri_boliviensis_boliviensis
ENSSFOG00015017283	sub1b	100	73.810	ENSSHAG00000014986	SUB1	100	76.984	Sarcophilus_harrisii
ENSSFOG00015017283	sub1b	100	78.400	ENSSMAG00000000313	sub1b	100	78.400	Scophthalmus_maximus
ENSSFOG00015017283	sub1b	100	79.200	ENSSDUG00000013854	sub1b	76	79.200	Seriola_dumerili
ENSSFOG00015017283	sub1b	100	79.200	ENSSLDG00000000852	sub1b	100	79.200	Seriola_lalandi_dorsalis
ENSSFOG00015017283	sub1b	100	72.222	ENSSPUG00000016817	SUB1	100	74.603	Sphenodon_punctatus
ENSSFOG00015017283	sub1b	100	80.000	ENSSPAG00000019363	sub1b	100	80.000	Stegastes_partitus
ENSSFOG00015017283	sub1b	100	70.079	ENSSSCG00000032650	-	100	74.803	Sus_scrofa
ENSSFOG00015017283	sub1b	100	70.079	ENSSSCG00000040294	-	87	74.803	Sus_scrofa
ENSSFOG00015017283	sub1b	100	73.016	ENSTGUG00000001918	SUB1	100	75.397	Taeniopygia_guttata
ENSSFOG00015017283	sub1b	100	76.800	ENSTRUG00000024420	sub1b	100	76.800	Takifugu_rubripes
ENSSFOG00015017283	sub1b	100	74.400	ENSTNIG00000002700	sub1b	100	74.400	Tetraodon_nigroviridis
ENSSFOG00015017283	sub1b	100	69.291	ENSTBEG00000004053	-	100	74.016	Tupaia_belangeri
ENSSFOG00015017283	sub1b	100	70.079	ENSTBEG00000012861	-	100	71.654	Tupaia_belangeri
ENSSFOG00015017283	sub1b	82	75.000	ENSTBEG00000011247	-	99	72.441	Tupaia_belangeri
ENSSFOG00015017283	sub1b	100	68.504	ENSTBEG00000001790	-	100	71.654	Tupaia_belangeri
ENSSFOG00015017283	sub1b	100	69.291	ENSTBEG00000006504	-	100	74.016	Tupaia_belangeri
ENSSFOG00015017283	sub1b	99	63.492	ENSTBEG00000015821	-	100	68.254	Tupaia_belangeri
ENSSFOG00015017283	sub1b	81	77.451	ENSTTRG00000017324	SUB1	99	79.412	Tursiops_truncatus
ENSSFOG00015017283	sub1b	100	70.079	ENSUAMG00000000182	SUB1	100	74.803	Ursus_americanus
ENSSFOG00015017283	sub1b	100	70.079	ENSUMAG00000013792	SUB1	100	74.803	Ursus_maritimus
ENSSFOG00015017283	sub1b	100	65.079	ENSVPAG00000011012	SUB1	100	68.254	Vicugna_pacos
ENSSFOG00015017283	sub1b	86	63.636	ENSVVUG00000025193	-	95	67.257	Vulpes_vulpes
ENSSFOG00015017283	sub1b	100	70.079	ENSVVUG00000022166	-	100	74.803	Vulpes_vulpes
ENSSFOG00015017283	sub1b	100	67.188	ENSXETG00000027218	sub1	100	70.312	Xenopus_tropicalis