EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017388 (Gene tree)
Gene ID: 108938125
Gene Symbol: RABL6
Alias: si:ch211-102c2.5
Full Name: rab-like protein 6
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 21451 bases
Position: chrKV411153.1:1669578-1691028
Accession: 108938125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027113	MMR_HSR1	PF01926.23	8.9e-05	1	1
ENSSFOP00015027158	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027423	RABL6-201	2124	XM_018758477	ENSSFOP00015027113	707 (aa)	XP_018613993	-
ENSSFOT00015027467	RABL6-203	2748	-	ENSSFOP00015027158	713 (aa)	-	-
ENSSFOT00015027496	RABL6-204	2196	-	ENSSFOP00015027187	707 (aa)	-	-
ENSSFOT00015027450	RABL6-202	2763	XM_018758475	ENSSFOP00015027141	718 (aa)	XP_018613991	-
ENSSFOT00015027531	RABL6-205	1084	-	ENSSFOP00015027222	105 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015017388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017388	RABL6	99	64.069	ENSSFOG00015013414	-	100	63.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017388	RABL6	100	62.685	ENSACIG00000010721	rabl6b	100	62.953	Amphilophus_citrinellus
ENSSFOG00015017388	RABL6	100	63.770	ENSATEG00000012055	rabl6b	100	64.000	Anabas_testudineus
ENSSFOG00015017388	RABL6	100	60.724	ENSAMXG00000038771	rabl6b	100	62.013	Astyanax_mexicanus
ENSSFOG00015017388	RABL6	100	58.602	ENSCSEG00000012430	-	99	60.055	Cynoglossus_semilaevis
ENSSFOG00015017388	RABL6	100	59.170	ENSCSEG00000016135	rabl6b	100	59.162	Cynoglossus_semilaevis
ENSSFOG00015017388	RABL6	100	58.599	ENSELUG00000004448	rabl6b	89	77.017	Esox_lucius
ENSSFOG00015017388	RABL6	100	65.887	ENSGAFG00000013561	rabl6b	97	73.483	Gambusia_affinis
ENSSFOG00015017388	RABL6	100	62.051	ENSGACG00000005242	rabl6b	100	62.698	Gasterosteus_aculeatus
ENSSFOG00015017388	RABL6	100	63.542	ENSIPUG00000019266	rabl6	100	62.451	Ictalurus_punctatus
ENSSFOG00015017388	RABL6	82	57.944	ENSLOCG00000001402	rabl6b	79	89.388	Lepisosteus_oculatus
ENSSFOG00015017388	RABL6	63	62.963	ENSMZEG00005003942	rabl6b	99	64.421	Maylandia_zebra
ENSSFOG00015017388	RABL6	63	71.141	ENSMMOG00000009459	rabl6b	96	68.610	Mola_mola
ENSSFOG00015017388	RABL6	100	63.479	ENSMALG00000002029	rabl6b	100	62.119	Monopterus_albus
ENSSFOG00015017388	RABL6	63	62.963	ENSNBRG00000012512	rabl6b	99	65.310	Neolamprologus_brichardi
ENSSFOG00015017388	RABL6	100	63.870	ENSONIG00000010408	rabl6b	100	64.141	Oreochromis_niloticus
ENSSFOG00015017388	RABL6	100	63.760	ENSORLG00020017557	rabl6b	100	62.781	Oryzias_latipes_hni
ENSSFOG00015017388	RABL6	90	66.423	ENSORLG00015007848	rabl6b	89	77.273	Oryzias_latipes_hsok
ENSSFOG00015017388	RABL6	90	67.365	ENSOMEG00000022840	rabl6b	96	67.015	Oryzias_melastigma
ENSSFOG00015017388	RABL6	90	60.894	ENSPCIG00000023722	RABL6	92	60.504	Phascolarctos_cinereus
ENSSFOG00015017388	RABL6	100	60.052	ENSPFOG00000003250	rabl6b	100	64.153	Poecilia_formosa
ENSSFOG00015017388	RABL6	100	59.923	ENSPLAG00000019562	rabl6b	100	64.021	Poecilia_latipinna
ENSSFOG00015017388	RABL6	100	60.180	ENSPMEG00000020472	rabl6b	100	64.021	Poecilia_mexicana
ENSSFOG00015017388	RABL6	90	67.643	ENSPREG00000014116	rabl6b	94	67.496	Poecilia_reticulata
ENSSFOG00015017388	RABL6	89	67.012	ENSSMAG00000012543	rabl6b	96	66.018	Scophthalmus_maximus
ENSSFOG00015017388	RABL6	100	65.680	ENSSDUG00000006564	rabl6b	100	63.526	Seriola_dumerili
ENSSFOG00015017388	RABL6	100	64.465	ENSSPAG00000021033	rabl6b	100	65.200	Stegastes_partitus
ENSSFOG00015017388	RABL6	99	60.211	ENSTNIG00000010595	rabl6b	94	64.497	Tetraodon_nigroviridis