EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017444 (Gene tree)
Gene ID: 108927763
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13918 bases
Position: chrKV410874.1:9275814-9289731
Accession: 108927763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027150	MMR_HSR1	PF01926.23	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027471	-	546	-	ENSSFOP00015027162	181 (aa)	-	-
ENSSFOT00015027459	-	5818	XM_018741296	ENSSFOP00015027150	244 (aa)	XP_018596812	-

Gene Model

Click here to download ENSSFOG00015017444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017444	rab18a	67	34.146	ENSSFOG00015006846	-	87	34.146
ENSSFOG00015017444	rab18a	66	31.928	ENSSFOG00015020074	DNAJC27	59	32.099
ENSSFOG00015017444	rab18a	78	42.647	ENSSFOG00015011318	-	76	48.780
ENSSFOG00015017444	rab18a	77	42.188	ENSSFOG00015008657	rab25a	77	43.902
ENSSFOG00015017444	rab18a	70	39.181	ENSSFOG00015011268	RAB41	80	39.181
ENSSFOG00015017444	rab18a	80	46.890	ENSSFOG00015000865	-	81	54.545
ENSSFOG00015017444	rab18a	81	35.678	ENSSFOG00015019202	RAB6B	85	37.640
ENSSFOG00015017444	rab18a	78	36.041	ENSSFOG00015005076	zgc:100918	90	36.757
ENSSFOG00015017444	rab18a	75	43.617	ENSSFOG00015021754	rab13	81	46.626
ENSSFOG00015017444	rab18a	73	39.106	ENSSFOG00015002077	rab6a	84	39.106
ENSSFOG00015017444	rab18a	71	36.517	ENSSFOG00015021180	RAB7A	86	36.517
ENSSFOG00015017444	rab18a	78	42.647	ENSSFOG00015012785	rab14	76	48.780
ENSSFOG00015017444	rab18a	78	33.846	ENSSFOG00015010492	rab9b	82	37.725
ENSSFOG00015017444	rab18a	78	36.041	ENSSFOG00015011771	-	81	39.521
ENSSFOG00015017444	rab18a	66	42.073	ENSSFOG00015016000	-	76	42.073
ENSSFOG00015017444	rab18a	70	44.186	ENSSFOG00015024042	rab11a	80	44.186
ENSSFOG00015017444	rab18a	66	32.530	ENSSFOG00015017512	dnajc27	61	32.530
ENSSFOG00015017444	rab18a	78	45.641	ENSSFOG00015011140	-	81	50.299
ENSSFOG00015017444	rab18a	73	36.464	ENSSFOG00015000053	rab9a	83	36.464
ENSSFOG00015017444	rab18a	70	41.040	ENSSFOG00015003628	-	81	41.040
ENSSFOG00015017444	rab18a	60	35.811	ENSSFOG00015014423	rras2	81	35.811
ENSSFOG00015017444	rab18a	69	36.471	ENSSFOG00015020319	mras	91	35.795
ENSSFOG00015017444	rab18a	68	48.795	ENSSFOG00015006076	rab35	91	45.946
ENSSFOG00015017444	rab18a	79	35.714	ENSSFOG00015003259	rab9a	85	36.364
ENSSFOG00015017444	rab18a	78	45.361	ENSSFOG00015020836	rab1ba	83	49.701
ENSSFOG00015017444	rab18a	73	42.697	ENSSFOG00015009988	-	78	42.697
ENSSFOG00015017444	rab18a	63	36.943	ENSSFOG00015016156	rab36	60	37.013
ENSSFOG00015017444	rab18a	77	38.916	ENSSFOG00015012088	rab42	88	40.102
ENSSFOG00015017444	rab18a	67	40.606	ENSSFOG00015012085	rab22a	93	38.251
ENSSFOG00015017444	rab18a	69	45.562	ENSSFOG00015009042	rab11bb	77	45.562
ENSSFOG00015017444	rab18a	79	39.394	ENSSFOG00015021115	-	86	40.212
ENSSFOG00015017444	rab18a	70	36.782	ENSSFOG00015012604	rab23	74	37.179
ENSSFOG00015017444	rab18a	78	46.154	ENSSFOG00015001293	rab1ab	82	50.898
ENSSFOG00015017444	rab18a	67	39.394	ENSSFOG00015020732	rab42a	77	39.394
ENSSFOG00015017444	rab18a	79	38.776	ENSSFOG00015014517	rab5a	86	39.572
ENSSFOG00015017444	rab18a	73	39.779	ENSSFOG00015018421	rab39b	81	39.306
ENSSFOG00015017444	rab18a	78	39.899	ENSSFOG00015020112	rab33b	83	40.110
ENSSFOG00015017444	rab18a	73	44.693	ENSSFOG00015021448	-	78	46.386
ENSSFOG00015017444	rab18a	74	42.935	ENSSFOG00015015336	rab4a	86	42.935
ENSSFOG00015017444	rab18a	65	35.220	ENSSFOG00015020738	rabl2	65	36.913
ENSSFOG00015017444	rab18a	69	39.535	ENSSFOG00015004253	rab33a	66	43.537
ENSSFOG00015017444	rab18a	69	44.379	ENSSFOG00015017296	rab15	78	44.379
ENSSFOG00015017444	rab18a	67	38.323	ENSSFOG00015020012	rab7a	81	38.323
ENSSFOG00015017444	rab18a	70	38.596	ENSSFOG00015004941	rab41	78	38.596
ENSSFOG00015017444	rab18a	68	32.402	ENSSFOG00015023790	rheb	85	32.099
ENSSFOG00015017444	rab18a	75	48.404	ENSSFOG00015015034	rab2a	86	48.649
ENSSFOG00015017444	rab18a	81	36.715	ENSSFOG00015006175	zgc:101559	85	37.374
ENSSFOG00015017444	rab18a	66	50.617	ENSSFOG00015005464	zgc:171927	78	49.701
ENSSFOG00015017444	rab18a	70	43.860	ENSSFOG00015008618	rab11al	79	43.860
ENSSFOG00015017444	rab18a	71	37.288	ENSSFOG00015009566	si:dkey-13a21.4	87	37.288
ENSSFOG00015017444	rab18a	61	43.137	ENSSFOG00015024034	rab33ba	72	43.243
ENSSFOG00015017444	rab18a	68	33.735	ENSSFOG00015003051	hrasb	87	33.735
ENSSFOG00015017444	rab18a	68	33.735	ENSSFOG00015023903	KRAS	87	34.146
ENSSFOG00015017444	rab18a	68	33.133	ENSSFOG00015011157	-	87	33.133
ENSSFOG00015017444	rab18a	69	48.521	ENSSFOG00015006414	-	82	48.521

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017444	rab18a	84	90.244	ENSAPOG00000010760	rab18a	100	90.244	Acanthochromis_polyacanthus
ENSSFOG00015017444	rab18a	84	79.512	ENSACIG00000009617	rab18a	100	79.512	Amphilophus_citrinellus
ENSSFOG00015017444	rab18a	84	90.732	ENSAOCG00000016233	rab18a	100	90.732	Amphiprion_ocellaris
ENSSFOG00015017444	rab18a	84	90.732	ENSAPEG00000005392	rab18a	100	90.732	Amphiprion_percula
ENSSFOG00015017444	rab18a	84	90.732	ENSATEG00000021911	rab18a	100	90.732	Anabas_testudineus
ENSSFOG00015017444	rab18a	84	90.244	ENSACAG00000005463	-	100	90.244	Anolis_carolinensis
ENSSFOG00015017444	rab18a	84	90.244	ENSACLG00000011484	rab18a	100	90.244	Astatotilapia_calliptera
ENSSFOG00015017444	rab18a	84	90.777	ENSCPBG00000015839	-	100	90.291	Chrysemys_picta_bellii
ENSSFOG00015017444	rab18a	81	71.574	ENSCPBG00000027619	-	98	71.574	Chrysemys_picta_bellii
ENSSFOG00015017444	rab18a	81	77.500	ENSCING00000006838	-	95	78.836	Ciona_intestinalis
ENSSFOG00015017444	rab18a	82	74.000	ENSCSAVG00000010348	-	95	76.190	Ciona_savignyi
ENSSFOG00015017444	rab18a	84	91.220	ENSCSEG00000011816	rab18a	100	91.220	Cynoglossus_semilaevis
ENSSFOG00015017444	rab18a	78	91.579	ENSCVAG00000015451	rab18a	100	90.244	Cyprinodon_variegatus
ENSSFOG00015017444	rab18a	84	82.927	ENSDARG00000055291	rab18a	100	82.927	Danio_rerio
ENSSFOG00015017444	rab18a	84	94.634	ENSELUG00000003805	rab18a	100	94.634	Esox_lucius
ENSSFOG00015017444	rab18a	78	92.105	ENSFHEG00000019455	rab18a	100	90.732	Fundulus_heteroclitus
ENSSFOG00015017444	rab18a	78	91.053	ENSGAFG00000002790	rab18a	100	88.780	Gambusia_affinis
ENSSFOG00015017444	rab18a	84	90.291	ENSGAGG00000015642	-	100	89.806	Gopherus_agassizii
ENSSFOG00015017444	rab18a	84	90.244	ENSHBUG00000001518	rab18a	100	90.244	Haplochromis_burtoni
ENSSFOG00015017444	rab18a	84	91.176	ENSLBEG00000005861	rab18a	95	91.176	Labrus_bergylta
ENSSFOG00015017444	rab18a	79	93.750	ENSLACG00000009310	rab18a	100	91.748	Latimeria_chalumnae
ENSSFOG00015017444	rab18a	84	93.659	ENSLOCG00000007491	rab18a	100	93.659	Lepisosteus_oculatus
ENSSFOG00015017444	rab18a	84	91.220	ENSMAMG00000014320	rab18a	100	91.220	Mastacembelus_armatus
ENSSFOG00015017444	rab18a	84	89.756	ENSMZEG00005017235	rab18a	100	89.756	Maylandia_zebra
ENSSFOG00015017444	rab18a	84	91.220	ENSMALG00000009813	rab18a	100	91.220	Monopterus_albus
ENSSFOG00015017444	rab18a	84	90.244	ENSNBRG00000013507	rab18a	100	90.244	Neolamprologus_brichardi
ENSSFOG00015017444	rab18a	78	90.526	ENSORLG00000004624	rab18a	100	89.756	Oryzias_latipes
ENSSFOG00015017444	rab18a	78	91.053	ENSORLG00020008333	rab18a	100	90.244	Oryzias_latipes_hni
ENSSFOG00015017444	rab18a	78	90.526	ENSORLG00015004739	rab18a	100	89.756	Oryzias_latipes_hsok
ENSSFOG00015017444	rab18a	78	90.526	ENSOMEG00000020605	rab18a	100	89.268	Oryzias_melastigma
ENSSFOG00015017444	rab18a	84	94.146	ENSPKIG00000009825	rab18a	100	94.146	Paramormyrops_kingsleyae
ENSSFOG00015017444	rab18a	84	89.268	ENSPMGG00000020409	-	100	89.268	Periophthalmus_magnuspinnatus
ENSSFOG00015017444	rab18a	78	91.579	ENSPFOG00000007571	rab18a	100	89.268	Poecilia_formosa
ENSSFOG00015017444	rab18a	78	91.579	ENSPLAG00000010104	rab18a	100	89.268	Poecilia_latipinna
ENSSFOG00015017444	rab18a	78	91.579	ENSPMEG00000013085	rab18a	100	89.268	Poecilia_mexicana
ENSSFOG00015017444	rab18a	83	87.129	ENSPREG00000005923	rab18a	88	85.253	Poecilia_reticulata
ENSSFOG00015017444	rab18a	84	90.244	ENSPNYG00000007064	rab18a	100	90.244	Pundamilia_nyererei
ENSSFOG00015017444	rab18a	83	84.729	ENSPNAG00000011548	rab18a	94	87.831	Pygocentrus_nattereri
ENSSFOG00015017444	rab18a	78	92.670	ENSSMAG00000002969	rab18a	100	91.748	Scophthalmus_maximus
ENSSFOG00015017444	rab18a	78	92.632	ENSSDUG00000003823	rab18a	100	91.707	Seriola_dumerili
ENSSFOG00015017444	rab18a	78	92.632	ENSSLDG00000006977	rab18a	100	91.707	Seriola_lalandi_dorsalis
ENSSFOG00015017444	rab18a	79	92.708	ENSSPUG00000017677	-	100	90.777	Sphenodon_punctatus
ENSSFOG00015017444	rab18a	84	88.780	ENSTRUG00000004984	rab18a	100	88.780	Takifugu_rubripes
ENSSFOG00015017444	rab18a	84	89.320	ENSUMAG00000015574	-	91	93.085	Ursus_maritimus
ENSSFOG00015017444	rab18a	84	90.777	ENSXETG00000004556	rab18	92	94.180	Xenopus_tropicalis
ENSSFOG00015017444	rab18a	78	91.579	ENSXMAG00000024122	rab18a	100	89.268	Xiphophorus_maculatus