EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017481 (Gene tree)
Gene ID: 108938820
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein with multiple splicing-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 14683 bases
Position: chrKV411175.1:94627-109309
Accession: 108938820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027188	RRM_1	PF00076.22	4.5e-11	1	1
ENSSFOP00015027210	RRM_1	PF00076.22	4.5e-11	1	1
ENSSFOP00015027231	RRM_1	PF00076.22	6.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027540	-	4716	-	ENSSFOP00015027231	221 (aa)	-	-
ENSSFOT00015027497	-	5236	-	ENSSFOP00015027188	189 (aa)	-	A0A1W5AP04
ENSSFOT00015027519	-	3805	XM_018759757	ENSSFOP00015027210	189 (aa)	XP_018615273	A0A1W5AP04

Gene Model

Click here to download ENSSFOG00015017481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017481's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017481	-	99	85.106	ENSSFOG00015000417	rbpms	97	85.106
ENSSFOG00015017481	-	100	66.667	ENSSFOG00015010476	rbpms2b	100	69.399
ENSSFOG00015017481	-	100	64.975	ENSSFOG00015022055	rbpms2	91	70.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017481	-	99	80.423	ENSG00000157110	RBPMS	97	79.091	Homo_sapiens
ENSSFOG00015017481	-	100	86.772	ENSAPOG00000022304	RBPMS	90	89.655	Acanthochromis_polyacanthus
ENSSFOG00015017481	-	82	83.974	ENSAMEG00000001522	RBPMS	71	83.871	Ailuropoda_melanoleuca
ENSSFOG00015017481	-	65	86.066	ENSACIG00000011395	RBPMS	63	88.136	Amphilophus_citrinellus
ENSSFOG00015017481	-	100	86.772	ENSAOCG00000007731	RBPMS	90	89.655	Amphiprion_ocellaris
ENSSFOG00015017481	-	100	86.772	ENSAPEG00000023543	RBPMS	90	89.655	Amphiprion_percula
ENSSFOG00015017481	-	100	86.772	ENSATEG00000018184	RBPMS	90	89.655	Anabas_testudineus
ENSSFOG00015017481	-	99	78.947	ENSACAG00000003012	RBPMS	90	80.682	Anolis_carolinensis
ENSSFOG00015017481	-	99	80.423	ENSANAG00000028150	RBPMS	89	82.759	Aotus_nancymaae
ENSSFOG00015017481	-	99	86.702	ENSACLG00000002926	RBPMS	90	89.655	Astatotilapia_calliptera
ENSSFOG00015017481	-	100	86.772	ENSAMXG00000033491	rbpms	98	86.772	Astyanax_mexicanus
ENSSFOG00015017481	-	99	79.365	ENSBTAG00000033727	RBPMS	71	83.226	Bos_taurus
ENSSFOG00015017481	-	99	80.423	ENSCJAG00000012366	RBPMS	89	82.759	Callithrix_jacchus
ENSSFOG00015017481	-	89	81.176	ENSCAFG00000006503	RBPMS	71	83.871	Canis_familiaris
ENSSFOG00015017481	-	89	81.176	ENSCAFG00020001031	RBPMS	71	83.871	Canis_lupus_dingo
ENSSFOG00015017481	-	99	73.684	ENSCHIG00000027156	RBPMS	89	75.429	Capra_hircus
ENSSFOG00015017481	-	58	87.156	ENSTSYG00000013982	RBPMS	70	96.774	Carlito_syrichta
ENSSFOG00015017481	-	99	79.894	ENSCPOG00000038597	RBPMS	89	82.759	Cavia_porcellus
ENSSFOG00015017481	-	99	80.423	ENSCCAG00000033226	RBPMS	89	82.759	Cebus_capucinus
ENSSFOG00015017481	-	99	80.423	ENSCATG00000036486	RBPMS	89	82.759	Cercocebus_atys
ENSSFOG00015017481	-	92	82.759	ENSCLAG00000001518	RBPMS	100	82.759	Chinchilla_lanigera
ENSSFOG00015017481	-	89	81.176	ENSCSAG00000015838	RBPMS	71	83.871	Chlorocebus_sabaeus
ENSSFOG00015017481	-	81	83.871	ENSCHOG00000008745	RBPMS	79	83.871	Choloepus_hoffmanni
ENSSFOG00015017481	-	99	80.952	ENSCPBG00000013437	RBPMS	90	82.857	Chrysemys_picta_bellii
ENSSFOG00015017481	-	92	82.759	ENSCANG00000034997	RBPMS	100	82.759	Colobus_angolensis_palliatus
ENSSFOG00015017481	-	99	75.789	ENSCGRG00001002814	Rbpms	89	82.286	Cricetulus_griseus_chok1gshd
ENSSFOG00015017481	-	92	77.714	ENSCGRG00000006095	Rbpms	100	82.286	Cricetulus_griseus_crigri
ENSSFOG00015017481	-	99	87.234	ENSCSEG00000002777	rbpms	96	89.655	Cynoglossus_semilaevis
ENSSFOG00015017481	-	100	86.772	ENSCVAG00000013975	RBPMS	90	89.655	Cyprinodon_variegatus
ENSSFOG00015017481	-	89	69.231	ENSDARG00000099396	rbpms	100	69.231	Danio_rerio
ENSSFOG00015017481	-	89	81.765	ENSDNOG00000008126	RBPMS	71	83.871	Dasypus_novemcinctus
ENSSFOG00015017481	-	89	81.765	ENSETEG00000017582	RBPMS	71	84.516	Echinops_telfairi
ENSSFOG00015017481	-	81	83.871	ENSEASG00005016962	RBPMS	78	84.416	Equus_asinus_asinus
ENSSFOG00015017481	-	89	80.588	ENSECAG00000020735	RBPMS	78	84.416	Equus_caballus
ENSSFOG00015017481	-	100	83.598	ENSELUG00000009787	rbpms	90	87.356	Esox_lucius
ENSSFOG00015017481	-	90	50.000	ENSFCAG00000022292	-	80	50.000	Felis_catus
ENSSFOG00015017481	-	99	79.894	ENSFCAG00000025639	-	89	82.759	Felis_catus
ENSSFOG00015017481	-	92	82.759	ENSFDAG00000012078	RBPMS	100	82.759	Fukomys_damarensis
ENSSFOG00015017481	-	100	86.772	ENSFHEG00000000618	rbpms	90	89.655	Fundulus_heteroclitus
ENSSFOG00015017481	-	76	54.167	ENSGMOG00000009646	-	87	54.615	Gadus_morhua
ENSSFOG00015017481	-	100	86.243	ENSGAFG00000016566	RBPMS	90	89.655	Gambusia_affinis
ENSSFOG00015017481	-	99	77.128	ENSGACG00000019471	rbpms	90	78.736	Gasterosteus_aculeatus
ENSSFOG00015017481	-	61	84.483	ENSGAGG00000023634	RBPMS	54	82.258	Gopherus_agassizii
ENSSFOG00015017481	-	99	86.702	ENSHBUG00000005888	RBPMS	90	89.655	Haplochromis_burtoni
ENSSFOG00015017481	-	99	80.423	ENSHGLG00000002303	RBPMS	89	82.759	Heterocephalus_glaber_female
ENSSFOG00015017481	-	92	82.759	ENSHGLG00100008787	RBPMS	100	82.759	Heterocephalus_glaber_male
ENSSFOG00015017481	-	99	88.298	ENSHCOG00000005774	rbpms	91	90.230	Hippocampus_comes
ENSSFOG00015017481	-	98	85.027	ENSIPUG00000012459	RBPMS	91	86.782	Ictalurus_punctatus
ENSSFOG00015017481	-	99	79.894	ENSSTOG00000026546	RBPMS	89	82.759	Ictidomys_tridecemlineatus
ENSSFOG00015017481	-	99	80.952	ENSJJAG00000014024	Rbpms	89	83.333	Jaculus_jaculus
ENSSFOG00015017481	-	92	72.000	ENSKMAG00000006377	RBPMS	88	74.857	Kryptolebias_marmoratus
ENSSFOG00015017481	-	100	85.714	ENSLBEG00000027989	RBPMS	97	89.595	Labrus_bergylta
ENSSFOG00015017481	-	92	88.000	ENSLOCG00000013199	RBPMS	96	88.506	Lepisosteus_oculatus
ENSSFOG00015017481	-	89	81.176	ENSLAFG00000000209	RBPMS	71	83.871	Loxodonta_africana
ENSSFOG00015017481	-	99	80.423	ENSMFAG00000036911	RBPMS	89	82.759	Macaca_fascicularis
ENSSFOG00015017481	-	99	80.423	ENSMMUG00000000458	RBPMS	89	82.759	Macaca_mulatta
ENSSFOG00015017481	-	99	80.423	ENSMNEG00000043805	RBPMS	89	82.759	Macaca_nemestrina
ENSSFOG00015017481	-	92	82.759	ENSMLEG00000015635	RBPMS	100	82.759	Mandrillus_leucophaeus
ENSSFOG00015017481	-	99	86.702	ENSMZEG00005000698	RBPMS	97	90.173	Maylandia_zebra
ENSSFOG00015017481	-	92	82.857	ENSMGAG00000005088	RBPMS	90	83.429	Meleagris_gallopavo
ENSSFOG00015017481	-	99	75.789	ENSMAUG00000018892	Rbpms	89	82.286	Mesocricetus_auratus
ENSSFOG00015017481	-	99	76.190	ENSMICG00000001295	RBPMS	89	82.184	Microcebus_murinus
ENSSFOG00015017481	-	99	75.789	ENSMOCG00000014009	Rbpms	89	82.286	Microtus_ochrogaster
ENSSFOG00015017481	-	90	81.176	ENSMMOG00000012036	RBPMS	68	86.250	Mola_mola
ENSSFOG00015017481	-	99	80.423	ENSMODG00000019006	RBPMS	83	83.429	Monodelphis_domestica
ENSSFOG00015017481	-	100	85.185	ENSMALG00000003261	RBPMS	93	88.506	Monopterus_albus
ENSSFOG00015017481	-	99	76.316	MGP_CAROLIEiJ_G0030970	Rbpms	89	82.857	Mus_caroli
ENSSFOG00015017481	-	99	76.316	ENSMUSG00000031586	Rbpms	88	84.286	Mus_musculus
ENSSFOG00015017481	-	99	76.316	MGP_PahariEiJ_G0021439	Rbpms	89	82.857	Mus_pahari
ENSSFOG00015017481	-	99	76.316	MGP_SPRETEiJ_G0032087	Rbpms	89	82.857	Mus_spretus
ENSSFOG00015017481	-	82	83.974	ENSMPUG00000011314	RBPMS	71	83.871	Mustela_putorius_furo
ENSSFOG00015017481	-	99	80.423	ENSMLUG00000009391	RBPMS	89	82.759	Myotis_lucifugus
ENSSFOG00015017481	-	89	81.176	ENSNGAG00000011141	Rbpms	71	83.871	Nannospalax_galili
ENSSFOG00015017481	-	92	89.655	ENSNBRG00000003313	RBPMS	97	90.173	Neolamprologus_brichardi
ENSSFOG00015017481	-	99	80.423	ENSNLEG00000036183	-	89	82.759	Nomascus_leucogenys
ENSSFOG00015017481	-	99	80.423	ENSODEG00000006700	RBPMS	89	82.759	Octodon_degus
ENSSFOG00015017481	-	92	89.655	ENSONIG00000007546	RBPMS	100	90.230	Oreochromis_niloticus
ENSSFOG00015017481	-	89	81.176	ENSOCUG00000008572	RBPMS	71	83.871	Oryctolagus_cuniculus
ENSSFOG00015017481	-	99	86.702	ENSORLG00000004135	-	90	90.230	Oryzias_latipes
ENSSFOG00015017481	-	99	86.702	ENSORLG00020016179	RBPMS	90	90.230	Oryzias_latipes_hni
ENSSFOG00015017481	-	99	86.702	ENSORLG00015013770	RBPMS	90	90.230	Oryzias_latipes_hsok
ENSSFOG00015017481	-	100	86.243	ENSOMEG00000005044	RBPMS	91	89.714	Oryzias_melastigma
ENSSFOG00015017481	-	92	79.885	ENSOGAG00000030298	RBPMS	71	82.390	Otolemur_garnettii
ENSSFOG00015017481	-	59	86.607	ENSOARG00000010366	RBPMS	65	96.774	Ovis_aries
ENSSFOG00015017481	-	92	82.759	ENSPPAG00000033108	RBPMS	100	82.759	Pan_paniscus
ENSSFOG00015017481	-	99	79.894	ENSPPRG00000004836	RBPMS	89	82.759	Panthera_pardus
ENSSFOG00015017481	-	92	82.759	ENSPTIG00000015964	RBPMS	89	82.759	Panthera_tigris_altaica
ENSSFOG00015017481	-	99	80.423	ENSPTRG00000020135	RBPMS	89	82.759	Pan_troglodytes
ENSSFOG00015017481	-	99	80.423	ENSPANG00000008143	RBPMS	89	82.759	Papio_anubis
ENSSFOG00015017481	-	100	85.714	ENSPKIG00000000535	-	93	88.506	Paramormyrops_kingsleyae
ENSSFOG00015017481	-	100	87.302	ENSPKIG00000004836	rbpms	100	87.302	Paramormyrops_kingsleyae
ENSSFOG00015017481	-	92	82.759	ENSPSIG00000006136	RBPMS	99	82.759	Pelodiscus_sinensis
ENSSFOG00015017481	-	85	86.250	ENSPMGG00000018012	RBPMS	73	87.821	Periophthalmus_magnuspinnatus
ENSSFOG00015017481	-	99	76.440	ENSPEMG00000021130	Rbpms	89	82.386	Peromyscus_maniculatus_bairdii
ENSSFOG00015017481	-	96	81.967	ENSPCIG00000019298	-	71	80.117	Phascolarctos_cinereus
ENSSFOG00015017481	-	100	86.243	ENSPFOG00000017158	RBPMS	90	89.655	Poecilia_formosa
ENSSFOG00015017481	-	100	86.243	ENSPLAG00000010767	RBPMS	90	89.655	Poecilia_latipinna
ENSSFOG00015017481	-	100	86.243	ENSPMEG00000009788	RBPMS	90	89.655	Poecilia_mexicana
ENSSFOG00015017481	-	100	86.243	ENSPREG00000016959	RBPMS	90	89.655	Poecilia_reticulata
ENSSFOG00015017481	-	89	81.176	ENSPPYG00000018487	RBPMS	71	83.871	Pongo_abelii
ENSSFOG00015017481	-	58	88.073	ENSPCAG00000013493	-	85	96.774	Procavia_capensis
ENSSFOG00015017481	-	70	78.358	ENSPCOG00000015948	RBPMS	75	80.000	Propithecus_coquereli
ENSSFOG00015017481	-	89	80.588	ENSPVAG00000001661	RBPMS	71	83.871	Pteropus_vampyrus
ENSSFOG00015017481	-	99	86.702	ENSPNYG00000001172	RBPMS	97	90.173	Pundamilia_nyererei
ENSSFOG00015017481	-	100	85.714	ENSPNAG00000029160	RBPMS	90	88.439	Pygocentrus_nattereri
ENSSFOG00015017481	-	92	74.857	ENSRNOG00000013328	Rbpms	78	81.366	Rattus_norvegicus
ENSSFOG00015017481	-	92	82.759	ENSRBIG00000038218	RBPMS	100	82.759	Rhinopithecus_bieti
ENSSFOG00015017481	-	99	80.423	ENSRROG00000042518	RBPMS	89	82.759	Rhinopithecus_roxellana
ENSSFOG00015017481	-	99	80.952	ENSSBOG00000026670	RBPMS	89	83.333	Saimiri_boliviensis_boliviensis
ENSSFOG00015017481	-	94	82.123	ENSSHAG00000010114	RBPMS	90	83.908	Sarcophilus_harrisii
ENSSFOG00015017481	-	100	85.714	ENSSMAG00000010871	rbpms	90	89.655	Scophthalmus_maximus
ENSSFOG00015017481	-	100	86.243	ENSSDUG00000010894	RBPMS	91	90.230	Seriola_dumerili
ENSSFOG00015017481	-	100	86.243	ENSSLDG00000012916	RBPMS	90	89.655	Seriola_lalandi_dorsalis
ENSSFOG00015017481	-	89	78.824	ENSSARG00000000274	RBPMS	71	80.645	Sorex_araneus
ENSSFOG00015017481	-	93	82.955	ENSSPUG00000017525	RBPMS	67	83.908	Sphenodon_punctatus
ENSSFOG00015017481	-	95	68.715	ENSSPAG00000004777	rbpms	88	71.098	Stegastes_partitus
ENSSFOG00015017481	-	99	79.894	ENSSSCG00000015846	RBPMS	89	82.759	Sus_scrofa
ENSSFOG00015017481	-	99	78.307	ENSTGUG00000001776	RBPMS	92	81.609	Taeniopygia_guttata
ENSSFOG00015017481	-	100	85.185	ENSTRUG00000000041	RBPMS	90	87.931	Takifugu_rubripes
ENSSFOG00015017481	-	89	80.473	ENSTTRG00000012451	RBPMS	71	83.766	Tursiops_truncatus
ENSSFOG00015017481	-	61	82.759	ENSUAMG00000026353	RBPMS	61	96.774	Ursus_americanus
ENSSFOG00015017481	-	87	81.818	ENSUMAG00000007347	RBPMS	75	83.871	Ursus_maritimus
ENSSFOG00015017481	-	81	83.871	ENSVPAG00000010991	RBPMS	79	83.871	Vicugna_pacos
ENSSFOG00015017481	-	99	80.423	ENSVVUG00000019770	RBPMS	89	82.759	Vulpes_vulpes
ENSSFOG00015017481	-	92	84.483	ENSXETG00000011290	rbpms	100	84.483	Xenopus_tropicalis
ENSSFOG00015017481	-	92	83.333	ENSXCOG00000002436	RBPMS	91	83.523	Xiphophorus_couchianus
ENSSFOG00015017481	-	100	86.243	ENSXMAG00000027637	RBPMS	90	89.655	Xiphophorus_maculatus