EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015017544 (Gene tree)
Gene ID: 108920555
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 22560 bases
Position: chrKV410804.1:2286424-2308983
Accession: 108920555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027351	GTP_EFTU	PF00009.27	3.1e-47	1	1
ENSSFOP00015027351	GTP_EFTU_D2	PF03144.25	1.3e-07	1	1
ENSSFOP00015027351	GTP_EFTU_D3	PF03143.17	7.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027687	-	1866	-	ENSSFOP00015027378	560 (aa)	-	-
ENSSFOT00015027660	-	2267	XM_018729387	ENSSFOP00015027351	694 (aa)	XP_018584903	-

Gene Model

Click here to download ENSSFOG00015017544's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015017544	hbs1l	61	39.862	ENSSFOG00015021087	eef1a2	94	39.862
ENSSFOG00015017544	hbs1l	61	39.019	ENSSFOG00015014731	-	73	39.294
ENSSFOG00015017544	hbs1l	62	39.229	ENSSFOG00015022408	-	95	39.269
ENSSFOG00015017544	hbs1l	63	37.668	ENSSFOG00015019070	si:dkey-37o8.1	98	37.668
ENSSFOG00015017544	hbs1l	61	40.961	ENSSFOG00015003033	eef1a1a	94	40.961
ENSSFOG00015017544	hbs1l	61	39.252	ENSSFOG00015011277	gspt1	76	38.084
ENSSFOG00015017544	hbs1l	61	40.046	ENSSFOG00015012136	EEF1A1	94	40.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017544	hbs1l	96	71.179	ENSG00000112339	HBS1L	95	81.988	Homo_sapiens
ENSSFOG00015017544	hbs1l	89	69.984	ENSAPOG00000013169	hbs1l	97	69.663	Acanthochromis_polyacanthus
ENSSFOG00015017544	hbs1l	96	71.907	ENSAMEG00000009749	HBS1L	99	71.907	Ailuropoda_melanoleuca
ENSSFOG00015017544	hbs1l	75	82.061	ENSACIG00000017087	hbs1l	91	82.061	Amphilophus_citrinellus
ENSSFOG00015017544	hbs1l	96	75.862	ENSAPEG00000008320	hbs1l	99	75.862	Amphiprion_percula
ENSSFOG00015017544	hbs1l	96	75.284	ENSATEG00000004459	hbs1l	99	75.284	Anabas_testudineus
ENSSFOG00015017544	hbs1l	94	70.606	ENSAPLG00000007791	HBS1L	99	70.299	Anas_platyrhynchos
ENSSFOG00015017544	hbs1l	96	71.948	ENSACAG00000010120	HBS1L	99	71.948	Anolis_carolinensis
ENSSFOG00015017544	hbs1l	96	70.954	ENSANAG00000038076	HBS1L	99	70.954	Aotus_nancymaae
ENSSFOG00015017544	hbs1l	98	74.465	ENSACLG00000010469	hbs1l	100	75.036	Astatotilapia_calliptera
ENSSFOG00015017544	hbs1l	96	79.643	ENSAMXG00000004260	hbs1l	97	83.269	Astyanax_mexicanus
ENSSFOG00015017544	hbs1l	96	71.366	ENSBTAG00000020174	HBS1L	99	71.366	Bos_taurus
ENSSFOG00015017544	hbs1l	62	48.506	WBGene00010622	K07A12.4	72	48.506	Caenorhabditis_elegans
ENSSFOG00015017544	hbs1l	96	71.676	ENSCJAG00000007678	HBS1L	99	71.676	Callithrix_jacchus
ENSSFOG00015017544	hbs1l	96	71.470	ENSCAFG00000000226	HBS1L	99	71.470	Canis_familiaris
ENSSFOG00015017544	hbs1l	96	71.470	ENSCAFG00020021904	HBS1L	99	71.470	Canis_lupus_dingo
ENSSFOG00015017544	hbs1l	96	71.221	ENSCHIG00000010299	HBS1L	99	71.221	Capra_hircus
ENSSFOG00015017544	hbs1l	96	70.494	ENSTSYG00000007089	HBS1L	99	70.203	Carlito_syrichta
ENSSFOG00015017544	hbs1l	96	63.353	ENSCPOG00000007015	HBS1L	99	63.501	Cavia_porcellus
ENSSFOG00015017544	hbs1l	96	69.841	ENSCCAG00000033863	HBS1L	99	70.909	Cebus_capucinus
ENSSFOG00015017544	hbs1l	96	71.533	ENSCATG00000043042	HBS1L	99	71.325	Cercocebus_atys
ENSSFOG00015017544	hbs1l	96	70.349	ENSCLAG00000004937	HBS1L	99	70.349	Chinchilla_lanigera
ENSSFOG00015017544	hbs1l	96	71.387	ENSCSAG00000016791	HBS1L	99	71.387	Chlorocebus_sabaeus
ENSSFOG00015017544	hbs1l	94	55.988	ENSCHOG00000001852	HBS1L	99	55.354	Choloepus_hoffmanni
ENSSFOG00015017544	hbs1l	96	70.888	ENSCPBG00000017635	HBS1L	99	70.888	Chrysemys_picta_bellii
ENSSFOG00015017544	hbs1l	96	48.596	ENSCING00000005592	-	99	48.732	Ciona_intestinalis
ENSSFOG00015017544	hbs1l	96	48.011	ENSCSAVG00000002297	-	99	59.170	Ciona_savignyi
ENSSFOG00015017544	hbs1l	96	71.241	ENSCANG00000031208	HBS1L	99	71.033	Colobus_angolensis_palliatus
ENSSFOG00015017544	hbs1l	96	70.537	ENSCGRG00001024531	Hbs1l	99	70.247	Cricetulus_griseus_chok1gshd
ENSSFOG00015017544	hbs1l	96	70.537	ENSCGRG00000017361	Hbs1l	99	70.247	Cricetulus_griseus_crigri
ENSSFOG00015017544	hbs1l	96	76.109	ENSCSEG00000002794	hbs1l	94	75.966	Cynoglossus_semilaevis
ENSSFOG00015017544	hbs1l	96	73.400	ENSCVAG00000001462	hbs1l	99	73.400	Cyprinodon_variegatus
ENSSFOG00015017544	hbs1l	96	79.001	ENSDARG00000036778	hbs1l	99	78.855	Danio_rerio
ENSSFOG00015017544	hbs1l	96	70.991	ENSDORG00000005958	Hbs1l	99	70.554	Dipodomys_ordii
ENSSFOG00015017544	hbs1l	96	47.186	FBgn0042712	HBS1	100	48.052	Drosophila_melanogaster
ENSSFOG00015017544	hbs1l	96	66.570	ENSETEG00000000913	HBS1L	99	66.570	Echinops_telfairi
ENSSFOG00015017544	hbs1l	96	58.780	ENSEBUG00000010759	hbs1l	100	62.562	Eptatretus_burgeri
ENSSFOG00015017544	hbs1l	96	71.014	ENSEASG00005011148	HBS1L	99	70.392	Equus_asinus_asinus
ENSSFOG00015017544	hbs1l	96	71.159	ENSECAG00000004470	HBS1L	99	70.537	Equus_caballus
ENSSFOG00015017544	hbs1l	96	66.909	ENSEEUG00000013582	HBS1L	99	66.183	Erinaceus_europaeus
ENSSFOG00015017544	hbs1l	88	65.961	ENSELUG00000006444	hbs1l	96	60.772	Esox_lucius
ENSSFOG00015017544	hbs1l	96	71.761	ENSFCAG00000001810	HBS1L	99	78.227	Felis_catus
ENSSFOG00015017544	hbs1l	83	72.987	ENSFALG00000011898	HBS1L	99	72.987	Ficedula_albicollis
ENSSFOG00015017544	hbs1l	96	70.935	ENSFDAG00000011841	HBS1L	99	70.935	Fukomys_damarensis
ENSSFOG00015017544	hbs1l	96	74.359	ENSFHEG00000006942	hbs1l	99	74.786	Fundulus_heteroclitus
ENSSFOG00015017544	hbs1l	96	75.073	ENSGMOG00000011843	hbs1l	99	75.073	Gadus_morhua
ENSSFOG00015017544	hbs1l	96	71.948	ENSGALG00000013962	HBS1L	99	71.512	Gallus_gallus
ENSSFOG00015017544	hbs1l	96	74.786	ENSGAFG00000004157	hbs1l	99	74.786	Gambusia_affinis
ENSSFOG00015017544	hbs1l	96	75.400	ENSGACG00000011035	hbs1l	100	75.109	Gasterosteus_aculeatus
ENSSFOG00015017544	hbs1l	96	70.494	ENSGAGG00000002033	HBS1L	99	70.203	Gopherus_agassizii
ENSSFOG00015017544	hbs1l	75	70.849	ENSGGOG00000034956	-	93	80.645	Gorilla_gorilla
ENSSFOG00015017544	hbs1l	98	74.608	ENSHBUG00000013424	hbs1l	100	75.178	Haplochromis_burtoni
ENSSFOG00015017544	hbs1l	96	71.033	ENSHGLG00000000516	HBS1L	99	71.033	Heterocephalus_glaber_female
ENSSFOG00015017544	hbs1l	96	71.033	ENSHGLG00100003550	HBS1L	99	71.033	Heterocephalus_glaber_male
ENSSFOG00015017544	hbs1l	96	75.827	ENSHCOG00000007581	hbs1l	93	75.827	Hippocampus_comes
ENSSFOG00015017544	hbs1l	96	79.941	ENSIPUG00000010748	hbs1l	99	79.941	Ictalurus_punctatus
ENSSFOG00015017544	hbs1l	96	71.657	ENSSTOG00000007551	HBS1L	99	71.657	Ictidomys_tridecemlineatus
ENSSFOG00015017544	hbs1l	96	56.604	ENSJJAG00000012660	-	99	55.878	Jaculus_jaculus
ENSSFOG00015017544	hbs1l	96	68.705	ENSJJAG00000017024	-	97	68.122	Jaculus_jaculus
ENSSFOG00015017544	hbs1l	96	75.393	ENSKMAG00000012130	hbs1l	100	78.850	Kryptolebias_marmoratus
ENSSFOG00015017544	hbs1l	96	74.395	ENSLBEG00000002784	hbs1l	100	79.259	Labrus_bergylta
ENSSFOG00015017544	hbs1l	68	77.959	ENSLACG00000004528	HBS1L	99	78.367	Latimeria_chalumnae
ENSSFOG00015017544	hbs1l	96	75.565	ENSLOCG00000016221	hbs1l	99	75.141	Lepisosteus_oculatus
ENSSFOG00015017544	hbs1l	96	69.578	ENSLAFG00000007835	HBS1L	100	69.141	Loxodonta_africana
ENSSFOG00015017544	hbs1l	96	71.325	ENSMFAG00000003766	HBS1L	99	71.325	Macaca_fascicularis
ENSSFOG00015017544	hbs1l	96	67.857	ENSMMUG00000004802	HBS1L	99	74.545	Macaca_mulatta
ENSSFOG00015017544	hbs1l	96	71.325	ENSMNEG00000043942	HBS1L	99	71.325	Macaca_nemestrina
ENSSFOG00015017544	hbs1l	96	71.387	ENSMLEG00000043218	HBS1L	98	71.387	Mandrillus_leucophaeus
ENSSFOG00015017544	hbs1l	96	73.969	ENSMAMG00000016498	hbs1l	99	74.253	Mastacembelus_armatus
ENSSFOG00015017544	hbs1l	75	81.574	ENSMZEG00005024018	-	90	81.574	Maylandia_zebra
ENSSFOG00015017544	hbs1l	96	75.145	ENSMZEG00005015575	hbs1l	99	75.727	Maylandia_zebra
ENSSFOG00015017544	hbs1l	95	70.760	ENSMGAG00000013065	HBS1L	97	70.852	Meleagris_gallopavo
ENSSFOG00015017544	hbs1l	96	70.451	ENSMAUG00000001077	Hbs1l	99	70.160	Mesocricetus_auratus
ENSSFOG00015017544	hbs1l	96	60.725	ENSMICG00000030043	-	95	77.838	Microcebus_murinus
ENSSFOG00015017544	hbs1l	96	67.344	ENSMICG00000001533	-	98	69.138	Microcebus_murinus
ENSSFOG00015017544	hbs1l	96	70.972	ENSMOCG00000023038	Hbs1l	99	70.682	Microtus_ochrogaster
ENSSFOG00015017544	hbs1l	93	76.615	ENSMMOG00000015507	hbs1l	99	77.385	Mola_mola
ENSSFOG00015017544	hbs1l	96	71.470	ENSMODG00000017499	HBS1L	99	71.470	Monodelphis_domestica
ENSSFOG00015017544	hbs1l	96	75.818	ENSMALG00000010768	hbs1l	99	75.818	Monopterus_albus
ENSSFOG00015017544	hbs1l	96	70.072	MGP_CAROLIEiJ_G0015162	Hbs1l	99	69.640	Mus_caroli
ENSSFOG00015017544	hbs1l	96	70.504	ENSMUSG00000019977	Hbs1l	100	86.260	Mus_musculus
ENSSFOG00015017544	hbs1l	96	70.072	MGP_PahariEiJ_G0023782	Hbs1l	99	69.496	Mus_pahari
ENSSFOG00015017544	hbs1l	96	70.504	MGP_SPRETEiJ_G0015970	Hbs1l	99	69.928	Mus_spretus
ENSSFOG00015017544	hbs1l	96	71.159	ENSMPUG00000014810	HBS1L	99	70.682	Mustela_putorius_furo
ENSSFOG00015017544	hbs1l	96	70.930	ENSMLUG00000010618	HBS1L	99	70.494	Myotis_lucifugus
ENSSFOG00015017544	hbs1l	96	71.221	ENSNGAG00000015184	Hbs1l	99	70.785	Nannospalax_galili
ENSSFOG00015017544	hbs1l	96	75.145	ENSNBRG00000020095	hbs1l	99	75.727	Neolamprologus_brichardi
ENSSFOG00015017544	hbs1l	96	70.888	ENSNLEG00000014721	HBS1L	99	70.888	Nomascus_leucogenys
ENSSFOG00015017544	hbs1l	78	80.203	ENSMEUG00000003907	HBS1L	81	80.203	Notamacropus_eugenii
ENSSFOG00015017544	hbs1l	73	79.167	ENSOPRG00000013595	HBS1L	75	79.167	Ochotona_princeps
ENSSFOG00015017544	hbs1l	96	70.360	ENSODEG00000008959	HBS1L	99	70.299	Octodon_degus
ENSSFOG00015017544	hbs1l	97	75.000	ENSONIG00000000460	hbs1l	99	75.434	Oreochromis_niloticus
ENSSFOG00015017544	hbs1l	96	72.444	ENSOANG00000002684	-	99	72.107	Ornithorhynchus_anatinus
ENSSFOG00015017544	hbs1l	96	67.677	ENSOCUG00000011619	HBS1L	99	68.740	Oryctolagus_cuniculus
ENSSFOG00015017544	hbs1l	96	72.792	ENSORLG00000016559	hbs1l	99	72.650	Oryzias_latipes
ENSSFOG00015017544	hbs1l	96	73.219	ENSORLG00020003827	hbs1l	99	73.219	Oryzias_latipes_hni
ENSSFOG00015017544	hbs1l	96	72.650	ENSORLG00015023105	hbs1l	99	72.650	Oryzias_latipes_hsok
ENSSFOG00015017544	hbs1l	96	73.894	ENSOMEG00000016715	hbs1l	99	74.037	Oryzias_melastigma
ENSSFOG00015017544	hbs1l	96	71.761	ENSOGAG00000012604	HBS1L	99	71.761	Otolemur_garnettii
ENSSFOG00015017544	hbs1l	96	70.930	ENSOARG00000005671	-	99	70.930	Ovis_aries
ENSSFOG00015017544	hbs1l	96	71.325	ENSOARG00000014798	-	99	71.325	Ovis_aries
ENSSFOG00015017544	hbs1l	96	71.533	ENSPPAG00000029900	HBS1L	99	71.325	Pan_paniscus
ENSSFOG00015017544	hbs1l	96	71.761	ENSPPRG00000005285	HBS1L	99	71.761	Panthera_pardus
ENSSFOG00015017544	hbs1l	96	71.761	ENSPTIG00000015803	HBS1L	99	71.761	Panthera_tigris_altaica
ENSSFOG00015017544	hbs1l	96	71.533	ENSPTRG00000018630	HBS1L	99	71.325	Pan_troglodytes
ENSSFOG00015017544	hbs1l	96	71.533	ENSPANG00000007075	HBS1L	99	71.325	Papio_anubis
ENSSFOG00015017544	hbs1l	96	84.480	ENSPKIG00000023171	hbs1l	99	84.480	Paramormyrops_kingsleyae
ENSSFOG00015017544	hbs1l	83	69.697	ENSPSIG00000016467	HBS1L	96	69.558	Pelodiscus_sinensis
ENSSFOG00015017544	hbs1l	96	73.638	ENSPMGG00000018051	hbs1l	96	86.702	Periophthalmus_magnuspinnatus
ENSSFOG00015017544	hbs1l	96	70.537	ENSPEMG00000014369	Hbs1l	99	70.247	Peromyscus_maniculatus_bairdii
ENSSFOG00015017544	hbs1l	96	64.535	ENSPMAG00000002516	hbs1l	99	64.535	Petromyzon_marinus
ENSSFOG00015017544	hbs1l	96	74.574	ENSPFOG00000021764	hbs1l	99	74.574	Poecilia_formosa
ENSSFOG00015017544	hbs1l	96	74.644	ENSPLAG00000006193	hbs1l	99	74.644	Poecilia_latipinna
ENSSFOG00015017544	hbs1l	96	75.187	ENSPMEG00000000925	hbs1l	99	74.929	Poecilia_mexicana
ENSSFOG00015017544	hbs1l	96	74.786	ENSPREG00000011270	hbs1l	99	74.786	Poecilia_reticulata
ENSSFOG00015017544	hbs1l	96	70.742	ENSPPYG00000017027	HBS1L	99	70.742	Pongo_abelii
ENSSFOG00015017544	hbs1l	86	75.556	ENSPCAG00000007002	HBS1L	79	75.556	Procavia_capensis
ENSSFOG00015017544	hbs1l	82	74.857	ENSPVAG00000015229	HBS1L	88	74.248	Pteropus_vampyrus
ENSSFOG00015017544	hbs1l	96	75.000	ENSPNYG00000013360	hbs1l	99	75.581	Pundamilia_nyererei
ENSSFOG00015017544	hbs1l	96	79.001	ENSPNAG00000026721	hbs1l	99	78.855	Pygocentrus_nattereri
ENSSFOG00015017544	hbs1l	96	70.360	ENSRNOG00000014531	Hbs1l	99	69.928	Rattus_norvegicus
ENSSFOG00015017544	hbs1l	96	71.179	ENSRBIG00000004484	HBS1L	99	71.179	Rhinopithecus_bieti
ENSSFOG00015017544	hbs1l	96	71.241	ENSRROG00000026176	HBS1L	99	71.033	Rhinopithecus_roxellana
ENSSFOG00015017544	hbs1l	61	37.923	YKR084C	-	72	37.923	Saccharomyces_cerevisiae
ENSSFOG00015017544	hbs1l	96	62.680	ENSSBOG00000016930	-	98	76.471	Saimiri_boliviensis_boliviensis
ENSSFOG00015017544	hbs1l	96	71.098	ENSSBOG00000019696	-	99	71.243	Saimiri_boliviensis_boliviensis
ENSSFOG00015017544	hbs1l	96	71.907	ENSSHAG00000013509	HBS1L	99	71.907	Sarcophilus_harrisii
ENSSFOG00015017544	hbs1l	96	74.601	ENSSMAG00000010621	hbs1l	99	75.181	Scophthalmus_maximus
ENSSFOG00015017544	hbs1l	96	75.818	ENSSDUG00000012974	hbs1l	99	75.818	Seriola_dumerili
ENSSFOG00015017544	hbs1l	96	75.249	ENSSLDG00000004960	hbs1l	99	79.670	Seriola_lalandi_dorsalis
ENSSFOG00015017544	hbs1l	94	70.896	ENSSARG00000006747	HBS1L	99	70.226	Sorex_araneus
ENSSFOG00015017544	hbs1l	96	70.845	ENSSPUG00000012389	HBS1L	99	70.845	Sphenodon_punctatus
ENSSFOG00015017544	hbs1l	93	72.965	ENSSSCG00000004169	HBS1L	98	72.965	Sus_scrofa
ENSSFOG00015017544	hbs1l	96	71.573	ENSTGUG00000011507	HBS1L	99	71.284	Taeniopygia_guttata
ENSSFOG00015017544	hbs1l	96	76.667	ENSTRUG00000016128	hbs1l	89	89.189	Takifugu_rubripes
ENSSFOG00015017544	hbs1l	96	75.977	ENSTNIG00000016320	hbs1l	99	76.642	Tetraodon_nigroviridis
ENSSFOG00015017544	hbs1l	96	64.877	ENSTBEG00000009950	HBS1L	99	64.877	Tupaia_belangeri
ENSSFOG00015017544	hbs1l	96	69.622	ENSTTRG00000003715	HBS1L	99	69.477	Tursiops_truncatus
ENSSFOG00015017544	hbs1l	96	71.553	ENSUAMG00000001064	HBS1L	99	71.553	Ursus_americanus
ENSSFOG00015017544	hbs1l	96	71.408	ENSUMAG00000024395	HBS1L	99	81.081	Ursus_maritimus
ENSSFOG00015017544	hbs1l	86	76.667	ENSVPAG00000006280	HBS1L	90	76.667	Vicugna_pacos
ENSSFOG00015017544	hbs1l	96	71.470	ENSVVUG00000000295	HBS1L	99	71.470	Vulpes_vulpes
ENSSFOG00015017544	hbs1l	96	71.616	ENSXETG00000003726	hbs1l	99	71.616	Xenopus_tropicalis
ENSSFOG00015017544	hbs1l	96	76.023	ENSXCOG00000005323	hbs1l	100	76.023	Xiphophorus_couchianus
ENSSFOG00015017544	hbs1l	96	74.644	ENSXMAG00000004359	hbs1l	99	74.644	Xiphophorus_maculatus