EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015017560 (Gene tree)
Gene ID: 108919082
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7969 bases
Position: chrKV411265.1:2180152-2188120
Accession: 108919082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027343	TRM13	PF05206.14	3e-85	1	1
ENSSFOP00015027343	zf-U11-48K	PF05253.12	9.3e-10	1	1
ENSSFOP00015027343	zf-TRM13_CCCH	PF11722.8	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027652	-	5233	XM_018726843	ENSSFOP00015027343	458 (aa)	XP_018582359	A0A1W4XS32

Gene Model

Click here to download ENSSFOG00015017560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017560	trmt13	98	54.839	ENSG00000122435	TRMT13	96	56.835	Homo_sapiens
ENSSFOG00015017560	trmt13	98	52.941	ENSAPOG00000015131	trmt13	99	52.834	Acanthochromis_polyacanthus
ENSSFOG00015017560	trmt13	98	54.409	ENSAMEG00000008917	TRMT13	96	54.624	Ailuropoda_melanoleuca
ENSSFOG00015017560	trmt13	98	56.448	ENSACIG00000005804	trmt13	95	55.531	Amphilophus_citrinellus
ENSSFOG00015017560	trmt13	98	53.144	ENSAOCG00000023585	trmt13	99	52.738	Amphiprion_ocellaris
ENSSFOG00015017560	trmt13	98	52.941	ENSAPEG00000004025	trmt13	99	52.535	Amphiprion_percula
ENSSFOG00015017560	trmt13	99	56.809	ENSATEG00000006597	trmt13	98	56.809	Anabas_testudineus
ENSSFOG00015017560	trmt13	89	55.847	ENSAPLG00000014924	TRMT13	99	55.952	Anas_platyrhynchos
ENSSFOG00015017560	trmt13	97	54.923	ENSACAG00000003498	TRMT13	97	54.705	Anolis_carolinensis
ENSSFOG00015017560	trmt13	98	54.310	ENSANAG00000019525	TRMT13	83	66.667	Aotus_nancymaae
ENSSFOG00015017560	trmt13	98	57.701	ENSACLG00000020018	trmt13	99	57.267	Astatotilapia_calliptera
ENSSFOG00015017560	trmt13	99	61.229	ENSAMXG00000017963	trmt13	99	61.181	Astyanax_mexicanus
ENSSFOG00015017560	trmt13	99	53.700	ENSBTAG00000015781	TRMT13	98	53.700	Bos_taurus
ENSSFOG00015017560	trmt13	98	54.526	ENSCJAG00000000200	TRMT13	89	69.466	Callithrix_jacchus
ENSSFOG00015017560	trmt13	64	51.282	ENSCAFG00000020021	TRMT13	98	50.962	Canis_familiaris
ENSSFOG00015017560	trmt13	58	60.902	ENSCAFG00020011572	TRMT13	92	60.902	Canis_lupus_dingo
ENSSFOG00015017560	trmt13	99	53.178	ENSCHIG00000015395	TRMT13	98	52.542	Capra_hircus
ENSSFOG00015017560	trmt13	98	53.066	ENSTSYG00000010811	TRMT13	93	60.638	Carlito_syrichta
ENSSFOG00015017560	trmt13	70	44.817	ENSCAPG00000009085	TRMT13	89	46.951	Cavia_aperea
ENSSFOG00015017560	trmt13	97	55.628	ENSCPOG00000000694	TRMT13	96	55.054	Cavia_porcellus
ENSSFOG00015017560	trmt13	98	54.839	ENSCCAG00000023772	TRMT13	96	54.158	Cebus_capucinus
ENSSFOG00015017560	trmt13	98	55.054	ENSCATG00000033556	TRMT13	96	55.054	Cercocebus_atys
ENSSFOG00015017560	trmt13	89	55.314	ENSCLAG00000008220	TRMT13	99	54.632	Chinchilla_lanigera
ENSSFOG00015017560	trmt13	98	55.054	ENSCSAG00000001506	TRMT13	96	55.054	Chlorocebus_sabaeus
ENSSFOG00015017560	trmt13	99	55.745	ENSCPBG00000026671	TRMT13	98	55.745	Chrysemys_picta_bellii
ENSSFOG00015017560	trmt13	98	54.839	ENSCANG00000034659	TRMT13	96	54.839	Colobus_angolensis_palliatus
ENSSFOG00015017560	trmt13	99	54.449	ENSCGRG00001021601	Trmt13	97	54.202	Cricetulus_griseus_chok1gshd
ENSSFOG00015017560	trmt13	52	48.235	ENSCGRG00000000093	-	98	47.876	Cricetulus_griseus_crigri
ENSSFOG00015017560	trmt13	98	56.889	ENSCSEG00000000591	trmt13	99	56.889	Cynoglossus_semilaevis
ENSSFOG00015017560	trmt13	99	56.604	ENSCVAG00000017342	trmt13	96	56.604	Cyprinodon_variegatus
ENSSFOG00015017560	trmt13	99	63.420	ENSDARG00000102846	trmt13	98	63.696	Danio_rerio
ENSSFOG00015017560	trmt13	56	62.357	ENSDNOG00000001710	TRMT13	80	62.357	Dasypus_novemcinctus
ENSSFOG00015017560	trmt13	98	55.054	ENSDORG00000015808	Trmt13	96	55.054	Dipodomys_ordii
ENSSFOG00015017560	trmt13	99	34.249	FBgn0037435	CG18048	97	33.891	Drosophila_melanogaster
ENSSFOG00015017560	trmt13	98	47.034	ENSETEG00000005819	TRMT13	97	46.822	Echinops_telfairi
ENSSFOG00015017560	trmt13	96	45.333	ENSEBUG00000014444	trmt13	96	45.111	Eptatretus_burgeri
ENSSFOG00015017560	trmt13	97	54.783	ENSEASG00005015918	TRMT13	95	55.000	Equus_asinus_asinus
ENSSFOG00015017560	trmt13	97	54.783	ENSECAG00000022626	TRMT13	95	55.000	Equus_caballus
ENSSFOG00015017560	trmt13	80	51.724	ENSEEUG00000000294	TRMT13	77	51.724	Erinaceus_europaeus
ENSSFOG00015017560	trmt13	98	63.948	ENSELUG00000003803	trmt13	99	63.362	Esox_lucius
ENSSFOG00015017560	trmt13	98	54.741	ENSFCAG00000030618	TRMT13	96	56.115	Felis_catus
ENSSFOG00015017560	trmt13	97	55.531	ENSFALG00000002424	TRMT13	95	55.188	Ficedula_albicollis
ENSSFOG00015017560	trmt13	98	54.194	ENSFDAG00000006342	TRMT13	96	54.043	Fukomys_damarensis
ENSSFOG00015017560	trmt13	80	58.163	ENSFHEG00000022954	trmt13	93	58.594	Fundulus_heteroclitus
ENSSFOG00015017560	trmt13	96	56.492	ENSGMOG00000013223	trmt13	100	56.492	Gadus_morhua
ENSSFOG00015017560	trmt13	97	53.930	ENSGALG00000005290	TRMT13	97	54.113	Gallus_gallus
ENSSFOG00015017560	trmt13	82	56.010	ENSGAFG00000001577	trmt13	85	56.010	Gambusia_affinis
ENSSFOG00015017560	trmt13	99	57.174	ENSGACG00000013428	trmt13	99	57.826	Gasterosteus_aculeatus
ENSSFOG00015017560	trmt13	99	55.246	ENSGAGG00000023303	TRMT13	97	64.794	Gopherus_agassizii
ENSSFOG00015017560	trmt13	98	54.624	ENSGGOG00000005616	TRMT13	96	53.945	Gorilla_gorilla
ENSSFOG00015017560	trmt13	98	58.099	ENSHBUG00000007754	trmt13	99	57.667	Haplochromis_burtoni
ENSSFOG00015017560	trmt13	98	54.506	ENSHGLG00000002164	TRMT13	96	53.731	Heterocephalus_glaber_female
ENSSFOG00015017560	trmt13	98	54.506	ENSHGLG00100001618	TRMT13	96	53.731	Heterocephalus_glaber_male
ENSSFOG00015017560	trmt13	96	50.448	ENSHCOG00000020553	trmt13	96	50.336	Hippocampus_comes
ENSSFOG00015017560	trmt13	99	64.440	ENSIPUG00000024787	trmt13	100	64.286	Ictalurus_punctatus
ENSSFOG00015017560	trmt13	97	54.565	ENSSTOG00000013483	TRMT13	95	54.565	Ictidomys_tridecemlineatus
ENSSFOG00015017560	trmt13	98	52.903	ENSJJAG00000018012	Trmt13	97	52.239	Jaculus_jaculus
ENSSFOG00015017560	trmt13	64	54.693	ENSKMAG00000007639	trmt13	93	54.369	Kryptolebias_marmoratus
ENSSFOG00015017560	trmt13	98	54.430	ENSLBEG00000020238	trmt13	100	54.255	Labrus_bergylta
ENSSFOG00015017560	trmt13	99	58.174	ENSLACG00000013153	TRMT13	99	57.962	Latimeria_chalumnae
ENSSFOG00015017560	trmt13	99	60.954	ENSLOCG00000000418	trmt13	99	60.823	Lepisosteus_oculatus
ENSSFOG00015017560	trmt13	77	51.351	ENSLAFG00000002383	TRMT13	99	51.351	Loxodonta_africana
ENSSFOG00015017560	trmt13	98	55.172	ENSMFAG00000034681	TRMT13	96	54.741	Macaca_fascicularis
ENSSFOG00015017560	trmt13	98	55.172	ENSMMUG00000004243	TRMT13	96	54.741	Macaca_mulatta
ENSSFOG00015017560	trmt13	98	55.172	ENSMNEG00000036102	TRMT13	96	54.741	Macaca_nemestrina
ENSSFOG00015017560	trmt13	98	54.839	ENSMLEG00000034258	TRMT13	96	54.839	Mandrillus_leucophaeus
ENSSFOG00015017560	trmt13	97	57.576	ENSMAMG00000016597	trmt13	96	57.143	Mastacembelus_armatus
ENSSFOG00015017560	trmt13	98	57.484	ENSMZEG00005020959	trmt13	99	57.050	Maylandia_zebra
ENSSFOG00015017560	trmt13	90	55.582	ENSMGAG00000006970	TRMT13	99	54.567	Meleagris_gallopavo
ENSSFOG00015017560	trmt13	98	53.419	ENSMAUG00000010448	Trmt13	97	53.419	Mesocricetus_auratus
ENSSFOG00015017560	trmt13	99	54.873	ENSMICG00000005283	TRMT13	96	56.115	Microcebus_murinus
ENSSFOG00015017560	trmt13	98	53.433	ENSMOCG00000019914	Trmt13	97	54.077	Microtus_ochrogaster
ENSSFOG00015017560	trmt13	57	50.562	ENSMMOG00000007762	trmt13	90	50.562	Mola_mola
ENSSFOG00015017560	trmt13	98	52.128	ENSMODG00000003646	TRMT13	97	51.386	Monodelphis_domestica
ENSSFOG00015017560	trmt13	98	56.889	ENSMALG00000020965	trmt13	98	56.889	Monopterus_albus
ENSSFOG00015017560	trmt13	97	54.468	MGP_CAROLIEiJ_G0025568	Trmt13	100	60.335	Mus_caroli
ENSSFOG00015017560	trmt13	98	54.818	ENSMUSG00000033439	Trmt13	94	62.500	Mus_musculus
ENSSFOG00015017560	trmt13	99	54.352	MGP_PahariEiJ_G0027014	Trmt13	93	61.446	Mus_pahari
ENSSFOG00015017560	trmt13	98	55.342	MGP_SPRETEiJ_G0026518	Trmt13	94	62.500	Mus_spretus
ENSSFOG00015017560	trmt13	77	52.486	ENSMPUG00000002078	-	96	52.514	Mustela_putorius_furo
ENSSFOG00015017560	trmt13	97	55.748	ENSMLUG00000002124	TRMT13	96	55.748	Myotis_lucifugus
ENSSFOG00015017560	trmt13	99	52.431	ENSNBRG00000006783	trmt13	99	52.008	Neolamprologus_brichardi
ENSSFOG00015017560	trmt13	98	54.624	ENSNLEG00000035917	TRMT13	96	54.624	Nomascus_leucogenys
ENSSFOG00015017560	trmt13	53	53.498	ENSMEUG00000013346	-	98	53.498	Notamacropus_eugenii
ENSSFOG00015017560	trmt13	68	61.654	ENSOPRG00000012048	TRMT13	64	61.654	Ochotona_princeps
ENSSFOG00015017560	trmt13	98	57.543	ENSONIG00000004574	trmt13	99	57.112	Oreochromis_niloticus
ENSSFOG00015017560	trmt13	90	54.779	ENSOANG00000012057	TRMT13	99	53.687	Ornithorhynchus_anatinus
ENSSFOG00015017560	trmt13	98	54.604	ENSOCUG00000023095	TRMT13	97	54.604	Oryctolagus_cuniculus
ENSSFOG00015017560	trmt13	98	53.780	ENSORLG00000003320	trmt13	99	53.595	Oryzias_latipes
ENSSFOG00015017560	trmt13	97	54.425	ENSORLG00020005972	trmt13	97	54.425	Oryzias_latipes_hni
ENSSFOG00015017560	trmt13	98	57.081	ENSORLG00015002270	trmt13	99	57.081	Oryzias_latipes_hsok
ENSSFOG00015017560	trmt13	98	57.516	ENSOMEG00000006724	trmt13	95	57.516	Oryzias_melastigma
ENSSFOG00015017560	trmt13	98	54.194	ENSOGAG00000005618	TRMT13	94	53.945	Otolemur_garnettii
ENSSFOG00015017560	trmt13	99	53.178	ENSOARG00000017983	TRMT13	98	52.542	Ovis_aries
ENSSFOG00015017560	trmt13	98	54.624	ENSPPAG00000043736	TRMT13	96	54.158	Pan_paniscus
ENSSFOG00015017560	trmt13	98	54.526	ENSPPRG00000003424	TRMT13	96	56.115	Panthera_pardus
ENSSFOG00015017560	trmt13	98	54.526	ENSPTIG00000018598	TRMT13	96	56.115	Panthera_tigris_altaica
ENSSFOG00015017560	trmt13	98	54.624	ENSPTRG00000001001	TRMT13	96	54.158	Pan_troglodytes
ENSSFOG00015017560	trmt13	98	54.839	ENSPANG00000007598	TRMT13	96	54.839	Papio_anubis
ENSSFOG00015017560	trmt13	99	68.053	ENSPKIG00000001514	trmt13	100	67.615	Paramormyrops_kingsleyae
ENSSFOG00015017560	trmt13	87	55.422	ENSPSIG00000012703	TRMT13	99	55.422	Pelodiscus_sinensis
ENSSFOG00015017560	trmt13	98	56.858	ENSPMGG00000013298	trmt13	94	56.858	Periophthalmus_magnuspinnatus
ENSSFOG00015017560	trmt13	98	53.814	ENSPEMG00000000275	Trmt13	96	53.814	Peromyscus_maniculatus_bairdii
ENSSFOG00015017560	trmt13	97	46.973	ENSPMAG00000000823	trmt13	98	46.751	Petromyzon_marinus
ENSSFOG00015017560	trmt13	100	51.782	ENSPCIG00000007699	TRMT13	99	51.452	Phascolarctos_cinereus
ENSSFOG00015017560	trmt13	97	56.512	ENSPFOG00000008675	trmt13	96	56.512	Poecilia_formosa
ENSSFOG00015017560	trmt13	98	56.250	ENSPLAG00000009709	trmt13	100	56.250	Poecilia_latipinna
ENSSFOG00015017560	trmt13	98	56.371	ENSPMEG00000022954	trmt13	100	56.371	Poecilia_mexicana
ENSSFOG00015017560	trmt13	80	58.621	ENSPREG00000005645	trmt13	95	56.164	Poecilia_reticulata
ENSSFOG00015017560	trmt13	99	54.565	ENSPPYG00000001120	TRMT13	97	54.565	Pongo_abelii
ENSSFOG00015017560	trmt13	98	54.194	ENSPCAG00000002340	TRMT13	96	54.194	Procavia_capensis
ENSSFOG00015017560	trmt13	98	54.839	ENSPCOG00000017984	TRMT13	96	54.604	Propithecus_coquereli
ENSSFOG00015017560	trmt13	97	53.664	ENSPVAG00000017430	TRMT13	95	54.013	Pteropus_vampyrus
ENSSFOG00015017560	trmt13	98	55.128	ENSPNYG00000013690	trmt13	99	54.701	Pundamilia_nyererei
ENSSFOG00015017560	trmt13	99	65.236	ENSPNAG00000022130	trmt13	100	65.236	Pygocentrus_nattereri
ENSSFOG00015017560	trmt13	98	54.721	ENSRNOG00000015140	Trmt13	94	54.721	Rattus_norvegicus
ENSSFOG00015017560	trmt13	98	54.839	ENSRBIG00000037686	TRMT13	96	54.839	Rhinopithecus_bieti
ENSSFOG00015017560	trmt13	98	54.839	ENSRROG00000044057	TRMT13	96	54.839	Rhinopithecus_roxellana
ENSSFOG00015017560	trmt13	98	54.409	ENSSBOG00000026541	TRMT13	96	54.194	Saimiri_boliviensis_boliviensis
ENSSFOG00015017560	trmt13	90	53.505	ENSSHAG00000005213	TRMT13	95	53.118	Sarcophilus_harrisii
ENSSFOG00015017560	trmt13	98	53.448	ENSSMAG00000014592	trmt13	97	53.448	Scophthalmus_maximus
ENSSFOG00015017560	trmt13	98	56.540	ENSSDUG00000015508	trmt13	97	56.159	Seriola_dumerili
ENSSFOG00015017560	trmt13	99	55.975	ENSSLDG00000019060	trmt13	98	55.975	Seriola_lalandi_dorsalis
ENSSFOG00015017560	trmt13	97	49.241	ENSSARG00000010344	TRMT13	97	48.707	Sorex_araneus
ENSSFOG00015017560	trmt13	96	54.286	ENSSPUG00000016339	TRMT13	99	54.286	Sphenodon_punctatus
ENSSFOG00015017560	trmt13	97	57.081	ENSSPAG00000011922	trmt13	99	56.466	Stegastes_partitus
ENSSFOG00015017560	trmt13	98	54.584	ENSSSCG00000006869	TRMT13	97	53.518	Sus_scrofa
ENSSFOG00015017560	trmt13	97	55.973	ENSTGUG00000005253	TRMT13	98	55.240	Taeniopygia_guttata
ENSSFOG00015017560	trmt13	97	53.796	ENSTRUG00000008400	trmt13	99	52.034	Takifugu_rubripes
ENSSFOG00015017560	trmt13	86	43.032	ENSTBEG00000008911	TRMT13	99	42.543	Tupaia_belangeri
ENSSFOG00015017560	trmt13	98	52.473	ENSUAMG00000017251	TRMT13	96	52.903	Ursus_americanus
ENSSFOG00015017560	trmt13	98	54.194	ENSUMAG00000007901	TRMT13	99	54.312	Ursus_maritimus
ENSSFOG00015017560	trmt13	76	70.370	ENSVPAG00000001034	TRMT13	84	70.370	Vicugna_pacos
ENSSFOG00015017560	trmt13	99	54.025	ENSVVUG00000021996	TRMT13	98	53.814	Vulpes_vulpes
ENSSFOG00015017560	trmt13	98	55.088	ENSXETG00000013204	trmt13	98	54.867	Xenopus_tropicalis
ENSSFOG00015017560	trmt13	98	55.531	ENSXMAG00000010765	trmt13	100	55.531	Xiphophorus_maculatus