EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015017614 (Gene tree)
Gene ID: 108926306
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 20289 bases
Position: chrKV410852.1:139585-159873
Accession: 108926306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015027516	Not1	PF04054.15	8.9e-122	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015027826	-	7005	XM_018738911	ENSSFOP00015027516	2334 (aa)	XP_018594427	-

Gene Model

Click here to download ENSSFOG00015017614's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015017614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015017614	cnot1	100	90.584	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSFOG00015017614	cnot1	97	93.097	ENSAPOG00000005042	cnot1	100	92.910	Acanthochromis_polyacanthus
ENSSFOG00015017614	cnot1	100	90.626	ENSAMEG00000017298	CNOT1	100	90.882	Ailuropoda_melanoleuca
ENSSFOG00015017614	cnot1	90	91.298	ENSACIG00000016003	cnot1	100	91.484	Amphilophus_citrinellus
ENSSFOG00015017614	cnot1	100	91.488	ENSAPEG00000022342	cnot1	100	91.530	Amphiprion_percula
ENSSFOG00015017614	cnot1	97	92.977	ENSATEG00000012892	cnot1	100	93.226	Anabas_testudineus
ENSSFOG00015017614	cnot1	100	90.038	ENSAPLG00000007162	CNOT1	100	90.038	Anas_platyrhynchos
ENSSFOG00015017614	cnot1	92	90.624	ENSACAG00000001602	CNOT1	98	90.624	Anolis_carolinensis
ENSSFOG00015017614	cnot1	100	90.960	ENSANAG00000038198	CNOT1	100	91.221	Aotus_nancymaae
ENSSFOG00015017614	cnot1	100	89.916	ENSACLG00000014234	cnot1	100	92.847	Astatotilapia_calliptera
ENSSFOG00015017614	cnot1	100	92.812	ENSAMXG00000013170	cnot1	100	93.109	Astyanax_mexicanus
ENSSFOG00015017614	cnot1	100	90.310	ENSBTAG00000020782	CNOT1	100	90.584	Bos_taurus
ENSSFOG00015017614	cnot1	81	39.326	WBGene00002845	let-711	87	39.606	Caenorhabditis_elegans
ENSSFOG00015017614	cnot1	100	90.310	ENSCJAG00000011318	CNOT1	100	90.566	Callithrix_jacchus
ENSSFOG00015017614	cnot1	100	89.996	ENSCAFG00000008426	CNOT1	100	90.251	Canis_familiaris
ENSSFOG00015017614	cnot1	100	92.245	ENSCAFG00020010156	CNOT1	100	92.505	Canis_lupus_dingo
ENSSFOG00015017614	cnot1	100	90.310	ENSCHIG00000010452	CNOT1	100	90.566	Capra_hircus
ENSSFOG00015017614	cnot1	100	92.374	ENSTSYG00000006888	CNOT1	100	92.634	Carlito_syrichta
ENSSFOG00015017614	cnot1	100	88.132	ENSCPOG00000013026	CNOT1	100	88.394	Cavia_porcellus
ENSSFOG00015017614	cnot1	100	90.746	ENSCCAG00000026333	CNOT1	100	91.006	Cebus_capucinus
ENSSFOG00015017614	cnot1	100	92.331	ENSCATG00000032625	CNOT1	100	92.591	Cercocebus_atys
ENSSFOG00015017614	cnot1	100	90.310	ENSCLAG00000006289	CNOT1	100	90.566	Chinchilla_lanigera
ENSSFOG00015017614	cnot1	100	90.352	ENSCSAG00000004731	CNOT1	100	90.608	Chlorocebus_sabaeus
ENSSFOG00015017614	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	96.296	Choloepus_hoffmanni
ENSSFOG00015017614	cnot1	98	90.004	ENSCPBG00000026222	CNOT1	99	90.048	Chrysemys_picta_bellii
ENSSFOG00015017614	cnot1	100	57.149	ENSCING00000009149	-	100	57.090	Ciona_intestinalis
ENSSFOG00015017614	cnot1	92	58.348	ENSCSAVG00000002414	-	93	79.470	Ciona_savignyi
ENSSFOG00015017614	cnot1	100	90.700	ENSCANG00000040534	CNOT1	100	90.959	Colobus_angolensis_palliatus
ENSSFOG00015017614	cnot1	100	92.291	ENSCGRG00001016365	Cnot1	100	92.334	Cricetulus_griseus_chok1gshd
ENSSFOG00015017614	cnot1	100	92.291	ENSCGRG00000001714	Cnot1	100	92.334	Cricetulus_griseus_crigri
ENSSFOG00015017614	cnot1	100	86.689	ENSCVAG00000018930	cnot1	100	86.856	Cyprinodon_variegatus
ENSSFOG00015017614	cnot1	100	91.541	ENSDARG00000004174	cnot1	100	92.127	Danio_rerio
ENSSFOG00015017614	cnot1	100	88.265	ENSDNOG00000013250	CNOT1	100	88.265	Dasypus_novemcinctus
ENSSFOG00015017614	cnot1	95	51.330	FBgn0085436	Not1	96	46.772	Drosophila_melanogaster
ENSSFOG00015017614	cnot1	84	88.102	ENSETEG00000012806	CNOT1	84	88.102	Echinops_telfairi
ENSSFOG00015017614	cnot1	81	81.672	ENSEBUG00000011534	cnot1	95	81.672	Eptatretus_burgeri
ENSSFOG00015017614	cnot1	97	94.444	ENSEASG00005005819	CNOT1	99	94.444	Equus_asinus_asinus
ENSSFOG00015017614	cnot1	100	90.352	ENSECAG00000009889	CNOT1	100	90.608	Equus_caballus
ENSSFOG00015017614	cnot1	89	90.725	ENSEEUG00000006015	CNOT1	90	91.199	Erinaceus_europaeus
ENSSFOG00015017614	cnot1	100	91.901	ENSELUG00000014085	cnot1	100	92.225	Esox_lucius
ENSSFOG00015017614	cnot1	100	90.130	ENSFCAG00000025155	CNOT1	100	90.385	Felis_catus
ENSSFOG00015017614	cnot1	100	90.189	ENSFALG00000007285	CNOT1	100	90.189	Ficedula_albicollis
ENSSFOG00015017614	cnot1	100	92.245	ENSFDAG00000013399	CNOT1	100	92.505	Fukomys_damarensis
ENSSFOG00015017614	cnot1	100	90.955	ENSFHEG00000020574	cnot1	100	91.122	Fundulus_heteroclitus
ENSSFOG00015017614	cnot1	92	93.253	ENSGMOG00000012864	cnot1	100	93.438	Gadus_morhua
ENSSFOG00015017614	cnot1	100	90.063	ENSGALG00000002301	CNOT1	100	90.063	Gallus_gallus
ENSSFOG00015017614	cnot1	100	89.849	ENSGAFG00000015005	cnot1	100	90.059	Gambusia_affinis
ENSSFOG00015017614	cnot1	92	93.395	ENSGACG00000002606	cnot1	100	92.727	Gasterosteus_aculeatus
ENSSFOG00015017614	cnot1	100	90.025	ENSGAGG00000022646	CNOT1	100	90.109	Gopherus_agassizii
ENSSFOG00015017614	cnot1	100	90.394	ENSGGOG00000009547	CNOT1	100	90.650	Gorilla_gorilla
ENSSFOG00015017614	cnot1	100	90.000	ENSHBUG00000001729	cnot1	100	92.847	Haplochromis_burtoni
ENSSFOG00015017614	cnot1	100	92.117	ENSHGLG00000014322	CNOT1	100	92.377	Heterocephalus_glaber_female
ENSSFOG00015017614	cnot1	100	90.974	ENSHCOG00000006501	cnot1	100	91.308	Hippocampus_comes
ENSSFOG00015017614	cnot1	100	89.862	ENSIPUG00000011915	cnot1	100	90.448	Ictalurus_punctatus
ENSSFOG00015017614	cnot1	100	92.288	ENSSTOG00000005490	CNOT1	100	92.548	Ictidomys_tridecemlineatus
ENSSFOG00015017614	cnot1	100	91.731	ENSJJAG00000000633	Cnot1	100	91.991	Jaculus_jaculus
ENSSFOG00015017614	cnot1	100	91.384	ENSKMAG00000006149	cnot1	100	91.552	Kryptolebias_marmoratus
ENSSFOG00015017614	cnot1	95	91.420	ENSLBEG00000004740	cnot1	100	91.989	Labrus_bergylta
ENSSFOG00015017614	cnot1	100	90.818	ENSLACG00000010869	CNOT1	100	90.818	Latimeria_chalumnae
ENSSFOG00015017614	cnot1	100	93.716	ENSLOCG00000006324	cnot1	100	93.842	Lepisosteus_oculatus
ENSSFOG00015017614	cnot1	100	90.235	ENSLAFG00000000098	CNOT1	100	90.490	Loxodonta_africana
ENSSFOG00015017614	cnot1	100	92.331	ENSMFAG00000035888	CNOT1	100	92.591	Macaca_fascicularis
ENSSFOG00015017614	cnot1	100	92.288	ENSMMUG00000014625	CNOT1	100	92.548	Macaca_mulatta
ENSSFOG00015017614	cnot1	100	90.189	ENSMNEG00000031820	CNOT1	100	90.236	Macaca_nemestrina
ENSSFOG00015017614	cnot1	100	91.217	ENSMLEG00000040933	CNOT1	100	91.478	Mandrillus_leucophaeus
ENSSFOG00015017614	cnot1	100	90.021	ENSMAMG00000016524	cnot1	100	90.273	Mastacembelus_armatus
ENSSFOG00015017614	cnot1	97	92.847	ENSMZEG00005016210	cnot1	100	92.847	Maylandia_zebra
ENSSFOG00015017614	cnot1	100	90.378	ENSMGAG00000001908	CNOT1	100	90.378	Meleagris_gallopavo
ENSSFOG00015017614	cnot1	100	92.245	ENSMICG00000007071	CNOT1	100	92.631	Microcebus_murinus
ENSSFOG00015017614	cnot1	100	92.117	ENSMOCG00000017969	Cnot1	100	92.377	Microtus_ochrogaster
ENSSFOG00015017614	cnot1	97	92.289	ENSMMOG00000019134	cnot1	100	92.600	Mola_mola
ENSSFOG00015017614	cnot1	100	90.021	ENSMODG00000014199	CNOT1	100	90.277	Monodelphis_domestica
ENSSFOG00015017614	cnot1	100	90.982	ENSMALG00000008645	cnot1	100	91.149	Monopterus_albus
ENSSFOG00015017614	cnot1	95	98.095	MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	Mus_caroli
ENSSFOG00015017614	cnot1	100	92.117	ENSMUSG00000036550	Cnot1	100	92.377	Mus_musculus
ENSSFOG00015017614	cnot1	100	92.074	MGP_PahariEiJ_G0023028	Cnot1	100	92.334	Mus_pahari
ENSSFOG00015017614	cnot1	100	92.117	MGP_SPRETEiJ_G0032549	Cnot1	100	92.377	Mus_spretus
ENSSFOG00015017614	cnot1	100	90.394	ENSMPUG00000004830	CNOT1	100	90.650	Mustela_putorius_furo
ENSSFOG00015017614	cnot1	100	90.185	ENSMLUG00000003728	CNOT1	100	90.440	Myotis_lucifugus
ENSSFOG00015017614	cnot1	100	92.202	ENSNGAG00000018628	Cnot1	100	92.463	Nannospalax_galili
ENSSFOG00015017614	cnot1	94	92.847	ENSNBRG00000019358	cnot1	100	92.847	Neolamprologus_brichardi
ENSSFOG00015017614	cnot1	100	92.374	ENSNLEG00000003566	CNOT1	100	92.634	Nomascus_leucogenys
ENSSFOG00015017614	cnot1	86	94.444	ENSMEUG00000006145	CNOT1	86	94.444	Notamacropus_eugenii
ENSSFOG00015017614	cnot1	83	99.029	ENSOPRG00000005604	CNOT1	84	99.029	Ochotona_princeps
ENSSFOG00015017614	cnot1	100	92.202	ENSODEG00000016337	CNOT1	100	92.463	Octodon_degus
ENSSFOG00015017614	cnot1	100	91.506	ENSONIG00000007358	cnot1	100	91.632	Oreochromis_niloticus
ENSSFOG00015017614	cnot1	92	91.551	ENSOANG00000012109	CNOT1	99	91.740	Ornithorhynchus_anatinus
ENSSFOG00015017614	cnot1	100	90.310	ENSOCUG00000006911	CNOT1	100	90.650	Oryctolagus_cuniculus
ENSSFOG00015017614	cnot1	100	91.901	ENSORLG00000013734	cnot1	100	92.153	Oryzias_latipes
ENSSFOG00015017614	cnot1	100	93.627	ENSORLG00020017012	cnot1	100	93.884	Oryzias_latipes_hni
ENSSFOG00015017614	cnot1	100	93.541	ENSORLG00015007091	cnot1	100	93.755	Oryzias_latipes_hsok
ENSSFOG00015017614	cnot1	100	92.811	ENSOMEG00000015124	cnot1	100	93.325	Oryzias_melastigma
ENSSFOG00015017614	cnot1	100	90.566	ENSOGAG00000000543	CNOT1	100	90.566	Otolemur_garnettii
ENSSFOG00015017614	cnot1	100	90.310	ENSOARG00000001567	CNOT1	100	90.566	Ovis_aries
ENSSFOG00015017614	cnot1	100	92.331	ENSPPAG00000022013	CNOT1	100	92.591	Pan_paniscus
ENSSFOG00015017614	cnot1	100	90.394	ENSPPRG00000004867	CNOT1	100	90.650	Panthera_pardus
ENSSFOG00015017614	cnot1	100	90.394	ENSPTIG00000012589	CNOT1	100	90.650	Panthera_tigris_altaica
ENSSFOG00015017614	cnot1	100	92.331	ENSPTRG00000008183	CNOT1	100	92.591	Pan_troglodytes
ENSSFOG00015017614	cnot1	100	88.932	ENSPANG00000020901	CNOT1	100	89.193	Papio_anubis
ENSSFOG00015017614	cnot1	97	88.889	ENSPKIG00000002914	CNOT1	99	88.889	Paramormyrops_kingsleyae
ENSSFOG00015017614	cnot1	100	94.426	ENSPKIG00000023538	CNOT1	100	94.426	Paramormyrops_kingsleyae
ENSSFOG00015017614	cnot1	100	90.231	ENSPSIG00000005499	CNOT1	100	90.231	Pelodiscus_sinensis
ENSSFOG00015017614	cnot1	100	78.835	ENSPMAG00000009381	cnot1	100	78.811	Petromyzon_marinus
ENSSFOG00015017614	cnot1	100	91.824	ENSPCIG00000007343	CNOT1	100	92.041	Phascolarctos_cinereus
ENSSFOG00015017614	cnot1	99	92.510	ENSPFOG00000003497	cnot1	98	92.725	Poecilia_formosa
ENSSFOG00015017614	cnot1	95	90.611	ENSPLAG00000014018	cnot1	100	90.667	Poecilia_latipinna
ENSSFOG00015017614	cnot1	95	88.822	ENSPMEG00000005868	cnot1	100	88.822	Poecilia_mexicana
ENSSFOG00015017614	cnot1	95	90.837	ENSPREG00000018793	cnot1	100	90.894	Poecilia_reticulata
ENSSFOG00015017614	cnot1	100	90.394	ENSPPYG00000007410	CNOT1	100	90.650	Pongo_abelii
ENSSFOG00015017614	cnot1	87	92.021	ENSPCAG00000003241	CNOT1	88	92.021	Procavia_capensis
ENSSFOG00015017614	cnot1	100	92.202	ENSPCOG00000027139	CNOT1	100	92.588	Propithecus_coquereli
ENSSFOG00015017614	cnot1	100	87.710	ENSPVAG00000004243	CNOT1	100	88.260	Pteropus_vampyrus
ENSSFOG00015017614	cnot1	97	92.847	ENSPNYG00000012919	cnot1	100	92.847	Pundamilia_nyererei
ENSSFOG00015017614	cnot1	100	91.345	ENSPNAG00000000246	cnot1	100	91.849	Pygocentrus_nattereri
ENSSFOG00015017614	cnot1	100	90.059	ENSRNOG00000012271	Cnot1	100	90.314	Rattus_norvegicus
ENSSFOG00015017614	cnot1	100	90.360	ENSRBIG00000044598	CNOT1	100	90.621	Rhinopithecus_bieti
ENSSFOG00015017614	cnot1	100	92.331	ENSRROG00000000906	CNOT1	100	92.591	Rhinopithecus_roxellana
ENSSFOG00015017614	cnot1	100	88.291	ENSSBOG00000029155	CNOT1	100	88.552	Saimiri_boliviensis_boliviensis
ENSSFOG00015017614	cnot1	100	89.983	ENSSHAG00000012187	CNOT1	100	90.197	Sarcophilus_harrisii
ENSSFOG00015017614	cnot1	100	91.301	ENSSMAG00000013844	cnot1	100	92.847	Scophthalmus_maximus
ENSSFOG00015017614	cnot1	97	92.915	ENSSDUG00000021491	cnot1	100	93.039	Seriola_dumerili
ENSSFOG00015017614	cnot1	100	92.446	ENSSLDG00000014816	cnot1	100	93.412	Seriola_lalandi_dorsalis
ENSSFOG00015017614	cnot1	85	97.800	ENSSARG00000000762	CNOT1	88	97.800	Sorex_araneus
ENSSFOG00015017614	cnot1	100	91.115	ENSSPAG00000018802	cnot1	100	91.408	Stegastes_partitus
ENSSFOG00015017614	cnot1	100	90.268	ENSSSCG00000002799	CNOT1	100	90.528	Sus_scrofa
ENSSFOG00015017614	cnot1	100	90.201	ENSTGUG00000005919	CNOT1	100	90.201	Taeniopygia_guttata
ENSSFOG00015017614	cnot1	100	89.954	ENSTNIG00000018706	cnot1	100	89.954	Tetraodon_nigroviridis
ENSSFOG00015017614	cnot1	80	97.183	ENSTBEG00000000720	CNOT1	80	97.183	Tupaia_belangeri
ENSSFOG00015017614	cnot1	95	88.631	ENSTTRG00000008460	CNOT1	95	88.986	Tursiops_truncatus
ENSSFOG00015017614	cnot1	100	90.394	ENSUAMG00000009251	CNOT1	100	90.650	Ursus_americanus
ENSSFOG00015017614	cnot1	100	90.394	ENSUMAG00000021291	CNOT1	100	90.650	Ursus_maritimus
ENSSFOG00015017614	cnot1	97	87.789	ENSVPAG00000008846	CNOT1	97	88.231	Vicugna_pacos
ENSSFOG00015017614	cnot1	100	90.746	ENSVVUG00000024037	CNOT1	100	91.006	Vulpes_vulpes
ENSSFOG00015017614	cnot1	100	84.354	ENSXETG00000015900	cnot1	100	84.409	Xenopus_tropicalis
ENSSFOG00015017614	cnot1	100	89.975	ENSXCOG00000013552	cnot1	100	90.185	Xiphophorus_couchianus
ENSSFOG00015017614	cnot1	100	90.017	ENSXMAG00000006031	cnot1	100	90.227	Xiphophorus_maculatus