EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015018117 (Gene tree)
Gene ID: 108936834
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 19536 bases
Position: chrKV411125.1:3789766-3809301
Accession: 108936834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015028312	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSSFOP00015028312	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSSFOP00015028312	Anticodon_1	PF08264.13	6.6e-16	1	1
ENSSFOP00015028312	tRNA-synt_1	PF00133.22	1.8e-38	1	2
ENSSFOP00015028312	tRNA-synt_1	PF00133.22	1.8e-38	2	2
ENSSFOP00015028312	tRNA-synt_1e	PF01406.19	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015028633	-	7022	XM_018756436	ENSSFOP00015028312	1261 (aa)	XP_018611952	-

Gene Model

Click here to download ENSSFOG00015018117's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015018117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015018117	larsb	90	80.776	ENSG00000133706	LARS	96	81.574	Homo_sapiens
ENSSFOG00015018117	larsb	90	85.253	ENSAPOG00000010585	larsb	100	85.446	Acanthochromis_polyacanthus
ENSSFOG00015018117	larsb	90	80.600	ENSAMEG00000017584	LARS	96	80.600	Ailuropoda_melanoleuca
ENSSFOG00015018117	larsb	90	83.860	ENSACIG00000014026	larsb	97	83.888	Amphilophus_citrinellus
ENSSFOG00015018117	larsb	90	85.227	ENSAOCG00000016931	larsb	97	85.227	Amphiprion_ocellaris
ENSSFOG00015018117	larsb	90	85.315	ENSAPEG00000017720	larsb	97	85.315	Amphiprion_percula
ENSSFOG00015018117	larsb	90	81.459	ENSATEG00000010441	larsb	96	81.634	Anabas_testudineus
ENSSFOG00015018117	larsb	87	80.530	ENSAPLG00000008145	LARS	96	80.987	Anas_platyrhynchos
ENSSFOG00015018117	larsb	90	78.188	ENSACAG00000013916	LARS	97	78.452	Anolis_carolinensis
ENSSFOG00015018117	larsb	90	71.680	ENSANAG00000014375	LARS	96	71.869	Aotus_nancymaae
ENSSFOG00015018117	larsb	90	84.965	ENSACLG00000010881	larsb	97	84.965	Astatotilapia_calliptera
ENSSFOG00015018117	larsb	90	86.555	ENSAMXG00000019979	larsb	97	86.555	Astyanax_mexicanus
ENSSFOG00015018117	larsb	90	80.088	ENSBTAG00000006765	LARS	96	80.300	Bos_taurus
ENSSFOG00015018117	larsb	89	57.293	WBGene00003073	lars-1	95	57.293	Caenorhabditis_elegans
ENSSFOG00015018117	larsb	90	79.595	ENSCJAG00000021314	LARS	97	80.332	Callithrix_jacchus
ENSSFOG00015018117	larsb	90	80.688	ENSCAFG00000006431	LARS	96	80.688	Canis_familiaris
ENSSFOG00015018117	larsb	90	80.742	ENSCAFG00020025009	LARS	96	80.742	Canis_lupus_dingo
ENSSFOG00015018117	larsb	90	80.299	ENSCHIG00000014949	LARS	96	80.511	Capra_hircus
ENSSFOG00015018117	larsb	90	80.053	ENSTSYG00000001253	LARS	96	80.053	Carlito_syrichta
ENSSFOG00015018117	larsb	87	62.980	ENSCAPG00000015676	LARS	93	63.163	Cavia_aperea
ENSSFOG00015018117	larsb	90	78.873	ENSCPOG00000012329	LARS	97	78.873	Cavia_porcellus
ENSSFOG00015018117	larsb	90	80.441	ENSCCAG00000020789	LARS	97	80.387	Cebus_capucinus
ENSSFOG00015018117	larsb	87	80.948	ENSCATG00000033463	LARS	97	81.071	Cercocebus_atys
ENSSFOG00015018117	larsb	90	79.420	ENSCLAG00000011193	LARS	97	79.420	Chinchilla_lanigera
ENSSFOG00015018117	larsb	90	80.299	ENSCSAG00000012280	LARS	95	80.299	Chlorocebus_sabaeus
ENSSFOG00015018117	larsb	80	72.883	ENSCHOG00000009309	LARS	86	72.883	Choloepus_hoffmanni
ENSSFOG00015018117	larsb	90	80.810	ENSCPBG00000008415	LARS	99	81.120	Chrysemys_picta_bellii
ENSSFOG00015018117	larsb	90	64.960	ENSCING00000008535	-	96	64.960	Ciona_intestinalis
ENSSFOG00015018117	larsb	89	65.636	ENSCSAVG00000009040	-	98	70.740	Ciona_savignyi
ENSSFOG00015018117	larsb	90	80.529	ENSCANG00000031137	LARS	97	80.529	Colobus_angolensis_palliatus
ENSSFOG00015018117	larsb	84	75.119	ENSCGRG00001004647	Lars	96	75.119	Cricetulus_griseus_chok1gshd
ENSSFOG00015018117	larsb	90	76.910	ENSCGRG00000007284	Lars	97	76.910	Cricetulus_griseus_crigri
ENSSFOG00015018117	larsb	90	84.192	ENSCSEG00000014984	larsb	97	84.192	Cynoglossus_semilaevis
ENSSFOG00015018117	larsb	90	86.252	ENSCVAG00000014685	larsb	97	86.252	Cyprinodon_variegatus
ENSSFOG00015018117	larsb	60	87.105	ENSDARG00000019280	larsb	95	87.105	Danio_rerio
ENSSFOG00015018117	larsb	87	79.745	ENSDNOG00000017963	LARS	96	80.109	Dasypus_novemcinctus
ENSSFOG00015018117	larsb	90	75.375	ENSDORG00000014913	Lars	96	75.375	Dipodomys_ordii
ENSSFOG00015018117	larsb	89	60.545	FBgn0284253	LeuRS	96	60.984	Drosophila_melanogaster
ENSSFOG00015018117	larsb	88	64.376	ENSETEG00000003145	LARS	100	64.376	Echinops_telfairi
ENSSFOG00015018117	larsb	86	60.384	ENSEBUG00000014985	larsb	97	60.384	Eptatretus_burgeri
ENSSFOG00015018117	larsb	90	80.387	ENSEASG00005020569	LARS	97	80.387	Equus_asinus_asinus
ENSSFOG00015018117	larsb	90	80.299	ENSECAG00000008963	LARS	99	80.505	Equus_caballus
ENSSFOG00015018117	larsb	82	65.526	ENSEEUG00000014854	LARS	89	65.526	Erinaceus_europaeus
ENSSFOG00015018117	larsb	90	85.312	ENSELUG00000023311	larsb	97	85.312	Esox_lucius
ENSSFOG00015018117	larsb	90	80.300	ENSFCAG00000008715	LARS	100	81.338	Felis_catus
ENSSFOG00015018117	larsb	90	80.458	ENSFALG00000003209	LARS	89	80.634	Ficedula_albicollis
ENSSFOG00015018117	larsb	90	79.736	ENSFDAG00000020764	LARS	96	79.630	Fukomys_damarensis
ENSSFOG00015018117	larsb	82	86.307	ENSFHEG00000010437	larsb	96	86.307	Fundulus_heteroclitus
ENSSFOG00015018117	larsb	90	83.099	ENSGMOG00000013645	larsb	96	83.099	Gadus_morhua
ENSSFOG00015018117	larsb	90	80.315	ENSGALG00000007494	LARS	98	80.414	Gallus_gallus
ENSSFOG00015018117	larsb	90	85.052	ENSGAFG00000005029	larsb	97	85.052	Gambusia_affinis
ENSSFOG00015018117	larsb	90	83.627	ENSGACG00000020720	larsb	96	83.627	Gasterosteus_aculeatus
ENSSFOG00015018117	larsb	90	80.018	ENSGAGG00000002353	LARS	97	80.106	Gopherus_agassizii
ENSSFOG00015018117	larsb	90	80.742	ENSGGOG00000004103	LARS	96	80.742	Gorilla_gorilla
ENSSFOG00015018117	larsb	90	83.848	ENSHBUG00000003051	larsb	100	85.299	Haplochromis_burtoni
ENSSFOG00015018117	larsb	90	79.332	ENSHGLG00000006937	LARS	97	79.332	Heterocephalus_glaber_female
ENSSFOG00015018117	larsb	90	79.332	ENSHGLG00100002801	LARS	97	79.332	Heterocephalus_glaber_male
ENSSFOG00015018117	larsb	90	84.514	ENSHCOG00000003651	larsb	97	84.514	Hippocampus_comes
ENSSFOG00015018117	larsb	90	84.229	ENSIPUG00000010756	lars	98	84.581	Ictalurus_punctatus
ENSSFOG00015018117	larsb	90	80.475	ENSSTOG00000002356	LARS	97	80.475	Ictidomys_tridecemlineatus
ENSSFOG00015018117	larsb	90	78.716	ENSJJAG00000015265	Lars	97	78.716	Jaculus_jaculus
ENSSFOG00015018117	larsb	90	84.541	ENSKMAG00000009903	larsb	97	84.803	Kryptolebias_marmoratus
ENSSFOG00015018117	larsb	90	85.315	ENSLBEG00000025237	larsb	97	85.315	Labrus_bergylta
ENSSFOG00015018117	larsb	90	81.618	ENSLACG00000009321	LARS	97	82.058	Latimeria_chalumnae
ENSSFOG00015018117	larsb	90	84.521	ENSLOCG00000010442	larsb	97	84.521	Lepisosteus_oculatus
ENSSFOG00015018117	larsb	90	79.347	ENSLAFG00000000318	LARS	96	79.347	Loxodonta_africana
ENSSFOG00015018117	larsb	90	80.441	ENSMFAG00000038685	LARS	97	80.441	Macaca_fascicularis
ENSSFOG00015018117	larsb	90	80.387	ENSMMUG00000029787	LARS	97	80.387	Macaca_mulatta
ENSSFOG00015018117	larsb	90	78.414	ENSMNEG00000044014	LARS	97	78.414	Macaca_nemestrina
ENSSFOG00015018117	larsb	90	80.264	ENSMLEG00000037563	LARS	97	80.264	Mandrillus_leucophaeus
ENSSFOG00015018117	larsb	90	84.615	ENSMAMG00000021385	larsb	97	84.615	Mastacembelus_armatus
ENSSFOG00015018117	larsb	90	84.907	ENSMZEG00005002662	larsb	97	84.878	Maylandia_zebra
ENSSFOG00015018117	larsb	87	80.563	ENSMGAG00000009388	LARS	97	81.017	Meleagris_gallopavo
ENSSFOG00015018117	larsb	90	69.224	ENSMAUG00000003063	Lars	96	69.224	Mesocricetus_auratus
ENSSFOG00015018117	larsb	90	80.088	ENSMICG00000035589	-	97	80.088	Microcebus_murinus
ENSSFOG00015018117	larsb	88	67.536	ENSMICG00000035435	-	96	67.536	Microcebus_murinus
ENSSFOG00015018117	larsb	90	79.017	ENSMOCG00000002092	Lars	97	79.017	Microtus_ochrogaster
ENSSFOG00015018117	larsb	90	81.802	ENSMMOG00000013802	larsb	96	81.802	Mola_mola
ENSSFOG00015018117	larsb	90	74.647	ENSMODG00000010231	LARS	96	74.647	Monodelphis_domestica
ENSSFOG00015018117	larsb	90	83.100	ENSMALG00000018444	larsb	96	83.100	Monopterus_albus
ENSSFOG00015018117	larsb	90	78.841	MGP_CAROLIEiJ_G0022225	Lars	97	78.841	Mus_caroli
ENSSFOG00015018117	larsb	90	78.665	ENSMUSG00000024493	Lars	97	78.665	Mus_musculus
ENSSFOG00015018117	larsb	90	78.665	MGP_PahariEiJ_G0018958	Lars	97	78.665	Mus_pahari
ENSSFOG00015018117	larsb	90	79.017	MGP_SPRETEiJ_G0023135	Lars	97	79.017	Mus_spretus
ENSSFOG00015018117	larsb	90	80.423	ENSMPUG00000007844	LARS	96	80.423	Mustela_putorius_furo
ENSSFOG00015018117	larsb	90	79.347	ENSMLUG00000001125	LARS	96	79.347	Myotis_lucifugus
ENSSFOG00015018117	larsb	90	79.189	ENSNGAG00000011596	Lars	96	79.189	Nannospalax_galili
ENSSFOG00015018117	larsb	90	84.819	ENSNBRG00000005764	larsb	97	84.790	Neolamprologus_brichardi
ENSSFOG00015018117	larsb	90	80.300	ENSNLEG00000009816	LARS	96	80.300	Nomascus_leucogenys
ENSSFOG00015018117	larsb	70	80.108	ENSOPRG00000003076	LARS	80	80.108	Ochotona_princeps
ENSSFOG00015018117	larsb	90	76.678	ENSODEG00000004882	LARS	96	76.678	Octodon_degus
ENSSFOG00015018117	larsb	90	85.052	ENSONIG00000008493	larsb	97	85.052	Oreochromis_niloticus
ENSSFOG00015018117	larsb	90	77.233	ENSOANG00000005755	LARS	97	77.233	Ornithorhynchus_anatinus
ENSSFOG00015018117	larsb	90	80.688	ENSOCUG00000015684	LARS	96	80.688	Oryctolagus_cuniculus
ENSSFOG00015018117	larsb	90	84.703	ENSORLG00000001622	larsb	97	84.703	Oryzias_latipes
ENSSFOG00015018117	larsb	90	84.790	ENSORLG00020019950	larsb	97	84.790	Oryzias_latipes_hni
ENSSFOG00015018117	larsb	90	84.790	ENSORLG00015003895	larsb	97	84.790	Oryzias_latipes_hsok
ENSSFOG00015018117	larsb	90	84.978	ENSOMEG00000005677	larsb	98	84.978	Oryzias_melastigma
ENSSFOG00015018117	larsb	87	78.170	ENSOGAG00000008750	LARS	97	78.170	Otolemur_garnettii
ENSSFOG00015018117	larsb	90	80.106	ENSOARG00000002454	-	97	80.106	Ovis_aries
ENSSFOG00015018117	larsb	90	80.035	ENSOARG00000015911	-	96	80.035	Ovis_aries
ENSSFOG00015018117	larsb	90	80.830	ENSPPAG00000027964	LARS	96	80.830	Pan_paniscus
ENSSFOG00015018117	larsb	90	80.511	ENSPPRG00000023492	LARS	96	80.511	Panthera_pardus
ENSSFOG00015018117	larsb	90	80.335	ENSPTIG00000013110	LARS	96	80.335	Panthera_tigris_altaica
ENSSFOG00015018117	larsb	90	80.742	ENSPTRG00000017372	LARS	96	80.742	Pan_troglodytes
ENSSFOG00015018117	larsb	90	80.441	ENSPANG00000002663	LARS	97	80.441	Papio_anubis
ENSSFOG00015018117	larsb	90	87.357	ENSPKIG00000006650	larsb	96	85.250	Paramormyrops_kingsleyae
ENSSFOG00015018117	larsb	90	80.282	ENSPSIG00000015641	LARS	97	80.282	Pelodiscus_sinensis
ENSSFOG00015018117	larsb	60	86.974	ENSPMGG00000019556	LARS	95	86.974	Periophthalmus_magnuspinnatus
ENSSFOG00015018117	larsb	90	75.593	ENSPEMG00000010933	Lars	97	75.593	Peromyscus_maniculatus_bairdii
ENSSFOG00015018117	larsb	90	79.718	ENSPCIG00000030572	LARS	96	79.718	Phascolarctos_cinereus
ENSSFOG00015018117	larsb	90	85.315	ENSPFOG00000002361	larsb	97	85.315	Poecilia_formosa
ENSSFOG00015018117	larsb	90	85.490	ENSPLAG00000016550	larsb	97	85.490	Poecilia_latipinna
ENSSFOG00015018117	larsb	90	85.052	ENSPMEG00000018422	larsb	97	85.052	Poecilia_mexicana
ENSSFOG00015018117	larsb	90	84.878	ENSPREG00000005668	larsb	97	84.878	Poecilia_reticulata
ENSSFOG00015018117	larsb	90	78.804	ENSPPYG00000015908	LARS	94	78.804	Pongo_abelii
ENSSFOG00015018117	larsb	83	75.000	ENSPCAG00000005621	LARS	99	75.000	Procavia_capensis
ENSSFOG00015018117	larsb	90	78.540	ENSPCOG00000019325	LARS	97	78.540	Propithecus_coquereli
ENSSFOG00015018117	larsb	87	70.100	ENSPVAG00000011237	LARS	97	71.285	Pteropus_vampyrus
ENSSFOG00015018117	larsb	90	84.960	ENSPNYG00000015254	larsb	97	84.960	Pundamilia_nyererei
ENSSFOG00015018117	larsb	90	85.400	ENSPNAG00000027191	larsb	97	85.400	Pygocentrus_nattereri
ENSSFOG00015018117	larsb	90	78.490	ENSRNOG00000018304	Lars	97	78.490	Rattus_norvegicus
ENSSFOG00015018117	larsb	88	78.843	ENSRBIG00000043198	LARS	99	78.843	Rhinopithecus_bieti
ENSSFOG00015018117	larsb	84	45.150	YPL160W	CDC60	99	45.249	Saccharomyces_cerevisiae
ENSSFOG00015018117	larsb	90	77.954	ENSSBOG00000026661	LARS	96	80.863	Saimiri_boliviensis_boliviensis
ENSSFOG00015018117	larsb	90	80.756	ENSSHAG00000006084	LARS	96	80.969	Sarcophilus_harrisii
ENSSFOG00015018117	larsb	82	85.331	ENSSMAG00000004078	larsb	97	85.331	Scophthalmus_maximus
ENSSFOG00015018117	larsb	90	84.965	ENSSDUG00000021142	larsb	97	84.965	Seriola_dumerili
ENSSFOG00015018117	larsb	90	84.965	ENSSLDG00000007054	larsb	97	84.965	Seriola_lalandi_dorsalis
ENSSFOG00015018117	larsb	76	71.223	ENSSARG00000013481	LARS	82	71.223	Sorex_araneus
ENSSFOG00015018117	larsb	90	79.982	ENSSPUG00000013805	LARS	97	80.509	Sphenodon_punctatus
ENSSFOG00015018117	larsb	90	85.664	ENSSPAG00000012124	larsb	97	85.664	Stegastes_partitus
ENSSFOG00015018117	larsb	90	76.787	ENSSSCG00000014411	LARS	96	76.991	Sus_scrofa
ENSSFOG00015018117	larsb	90	79.894	ENSTGUG00000000092	-	96	80.071	Taeniopygia_guttata
ENSSFOG00015018117	larsb	90	83.042	ENSTRUG00000005358	larsb	97	83.042	Takifugu_rubripes
ENSSFOG00015018117	larsb	90	80.665	ENSTNIG00000018214	larsb	97	80.752	Tetraodon_nigroviridis
ENSSFOG00015018117	larsb	82	77.236	ENSTBEG00000003757	LARS	91	77.236	Tupaia_belangeri
ENSSFOG00015018117	larsb	87	77.443	ENSTTRG00000016712	LARS	93	77.443	Tursiops_truncatus
ENSSFOG00015018117	larsb	88	80.505	ENSUAMG00000019907	LARS	99	80.505	Ursus_americanus
ENSSFOG00015018117	larsb	90	80.600	ENSUMAG00000010585	LARS	96	80.600	Ursus_maritimus
ENSSFOG00015018117	larsb	83	79.533	ENSVPAG00000000557	LARS	89	79.533	Vicugna_pacos
ENSSFOG00015018117	larsb	90	80.600	ENSVVUG00000021124	LARS	96	80.600	Vulpes_vulpes
ENSSFOG00015018117	larsb	90	81.706	ENSXETG00000002320	lars	97	81.706	Xenopus_tropicalis
ENSSFOG00015018117	larsb	90	84.965	ENSXMAG00000001454	larsb	97	84.965	Xiphophorus_maculatus