EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015018128 (Gene tree)
Gene ID: 108929649
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7148 bases
Position: chrKV410902.1:1483718-1490865
Accession: 108929649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015028230	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015028551	-	2954	XM_018744340	ENSSFOP00015028230	198 (aa)	XP_018599856	A0A1W4ZH47

Gene Model

Click here to download ENSSFOG00015018128's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015018128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015018128	-	94	30.108	ENSSFOG00015014993	-	93	30.108
ENSSFOG00015018128	-	67	33.813	ENSSFOG00015015390	ARL4A	70	33.813
ENSSFOG00015018128	-	87	30.233	ENSSFOG00015020707	ARF5	89	30.233
ENSSFOG00015018128	-	100	90.404	ENSSFOG00015014010	sar1a	100	90.404
ENSSFOG00015018128	-	65	35.385	ENSSFOG00015001190	arl11	74	35.385
ENSSFOG00015018128	-	65	32.031	ENSSFOG00015015338	-	73	32.031
ENSSFOG00015018128	-	64	34.351	ENSSFOG00015020603	arl4aa	66	34.351
ENSSFOG00015018128	-	96	31.937	ENSSFOG00015022345	-	96	31.937
ENSSFOG00015018128	-	72	33.108	ENSSFOG00015018615	ARL4C	73	33.108
ENSSFOG00015018128	-	94	30.000	ENSSFOG00015023135	arl6	96	30.000
ENSSFOG00015018128	-	93	30.645	ENSSFOG00015001665	arl1	96	30.645
ENSSFOG00015018128	-	92	30.108	ENSSFOG00015007701	-	94	30.108
ENSSFOG00015018128	-	72	33.108	ENSSFOG00015007064	arl4cb	72	33.108
ENSSFOG00015018128	-	100	95.455	ENSSFOG00015020051	sar1b	100	95.455
ENSSFOG00015018128	-	80	31.447	ENSSFOG00015023057	arl13b	59	31.447
ENSSFOG00015018128	-	52	32.353	ENSSFOG00015008219	arl2	73	33.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015018128	-	100	86.364	ENSAPOG00000017891	-	100	86.364	Acanthochromis_polyacanthus
ENSSFOG00015018128	-	100	91.414	ENSAPOG00000007186	sar1b	100	91.414	Acanthochromis_polyacanthus
ENSSFOG00015018128	-	100	91.919	ENSACIG00000013634	sar1b	100	91.919	Amphilophus_citrinellus
ENSSFOG00015018128	-	100	85.354	ENSACIG00000024513	-	100	85.354	Amphilophus_citrinellus
ENSSFOG00015018128	-	100	90.909	ENSAOCG00000005888	sar1b	100	90.909	Amphiprion_ocellaris
ENSSFOG00015018128	-	100	86.364	ENSAOCG00000002627	-	100	86.364	Amphiprion_ocellaris
ENSSFOG00015018128	-	100	86.364	ENSAPEG00000019680	-	100	86.364	Amphiprion_percula
ENSSFOG00015018128	-	100	90.909	ENSAPEG00000022771	sar1b	100	90.909	Amphiprion_percula
ENSSFOG00015018128	-	100	90.404	ENSATEG00000012904	sar1b	100	90.404	Anabas_testudineus
ENSSFOG00015018128	-	100	84.848	ENSATEG00000023368	-	100	84.848	Anabas_testudineus
ENSSFOG00015018128	-	100	92.929	ENSACAG00000001470	-	100	92.929	Anolis_carolinensis
ENSSFOG00015018128	-	100	86.364	ENSACLG00000005011	-	100	86.364	Astatotilapia_calliptera
ENSSFOG00015018128	-	100	92.424	ENSACLG00000014649	sar1b	100	92.424	Astatotilapia_calliptera
ENSSFOG00015018128	-	100	86.869	ENSAMXG00000034192	-	91	86.869	Astyanax_mexicanus
ENSSFOG00015018128	-	59	94.872	ENSAMXG00000018108	sar1b	84	94.872	Astyanax_mexicanus
ENSSFOG00015018128	-	100	85.354	ENSCSEG00000016976	-	100	85.354	Cynoglossus_semilaevis
ENSSFOG00015018128	-	100	85.859	ENSCSEG00000015238	sar1b	97	85.859	Cynoglossus_semilaevis
ENSSFOG00015018128	-	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSSFOG00015018128	-	100	94.444	ENSDARG00000103403	sar1b	100	94.444	Danio_rerio
ENSSFOG00015018128	-	99	70.918	FBgn0038947	Sar1	99	70.918	Drosophila_melanogaster
ENSSFOG00015018128	-	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSSFOG00015018128	-	100	94.949	ENSELUG00000020912	sar1b	100	94.949	Esox_lucius
ENSSFOG00015018128	-	100	92.929	ENSFHEG00000019865	sar1b	100	92.929	Fundulus_heteroclitus
ENSSFOG00015018128	-	100	94.444	ENSGMOG00000008023	sar1b	100	94.444	Gadus_morhua
ENSSFOG00015018128	-	100	91.919	ENSGAFG00000007081	sar1b	100	91.919	Gambusia_affinis
ENSSFOG00015018128	-	100	90.909	ENSGACG00000001474	sar1b	100	90.909	Gasterosteus_aculeatus
ENSSFOG00015018128	-	100	86.364	ENSHBUG00000018397	-	100	86.364	Haplochromis_burtoni
ENSSFOG00015018128	-	100	92.424	ENSHBUG00000000915	sar1b	100	92.424	Haplochromis_burtoni
ENSSFOG00015018128	-	100	92.424	ENSHCOG00000010953	sar1b	100	92.424	Hippocampus_comes
ENSSFOG00015018128	-	100	88.384	ENSIPUG00000010046	sar1b	100	88.384	Ictalurus_punctatus
ENSSFOG00015018128	-	100	93.434	ENSIPUG00000020925	sar1b	100	93.434	Ictalurus_punctatus
ENSSFOG00015018128	-	100	85.354	ENSKMAG00000014875	-	100	85.354	Kryptolebias_marmoratus
ENSSFOG00015018128	-	100	91.414	ENSKMAG00000019693	sar1b	100	91.414	Kryptolebias_marmoratus
ENSSFOG00015018128	-	100	87.374	ENSLBEG00000016945	-	100	87.374	Labrus_bergylta
ENSSFOG00015018128	-	100	88.889	ENSLBEG00000027550	sar1b	100	88.889	Labrus_bergylta
ENSSFOG00015018128	-	100	74.874	ENSLACG00000017029	-	100	74.874	Latimeria_chalumnae
ENSSFOG00015018128	-	100	87.879	ENSLACG00000010795	sar1b	100	87.879	Latimeria_chalumnae
ENSSFOG00015018128	-	100	92.424	ENSLOCG00000005214	-	100	92.424	Lepisosteus_oculatus
ENSSFOG00015018128	-	100	94.949	ENSLOCG00000010197	sar1b	100	94.949	Lepisosteus_oculatus
ENSSFOG00015018128	-	100	90.909	ENSMAMG00000021732	sar1b	100	90.909	Mastacembelus_armatus
ENSSFOG00015018128	-	100	92.424	ENSMZEG00005008942	sar1b	100	92.424	Maylandia_zebra
ENSSFOG00015018128	-	100	86.364	ENSMZEG00005001012	-	100	86.364	Maylandia_zebra
ENSSFOG00015018128	-	90	95.531	ENSMGAG00000005387	-	91	95.531	Meleagris_gallopavo
ENSSFOG00015018128	-	100	84.848	ENSMMOG00000013803	-	100	84.848	Mola_mola
ENSSFOG00015018128	-	100	92.424	ENSMALG00000016635	sar1b	97	91.209	Monopterus_albus
ENSSFOG00015018128	-	100	92.424	ENSNBRG00000008013	sar1b	100	92.424	Neolamprologus_brichardi
ENSSFOG00015018128	-	100	86.364	ENSNBRG00000014004	-	100	86.364	Neolamprologus_brichardi
ENSSFOG00015018128	-	100	92.424	ENSONIG00000017278	sar1b	100	92.424	Oreochromis_niloticus
ENSSFOG00015018128	-	100	92.424	ENSORLG00000000932	sar1b	100	92.424	Oryzias_latipes
ENSSFOG00015018128	-	100	92.424	ENSORLG00020021985	sar1b	100	92.424	Oryzias_latipes_hni
ENSSFOG00015018128	-	100	92.424	ENSORLG00015007044	sar1b	100	92.424	Oryzias_latipes_hsok
ENSSFOG00015018128	-	100	92.424	ENSOMEG00000001052	sar1b	100	92.424	Oryzias_melastigma
ENSSFOG00015018128	-	100	92.929	ENSPKIG00000017353	-	100	92.929	Paramormyrops_kingsleyae
ENSSFOG00015018128	-	100	91.919	ENSPKIG00000010688	sar1b	100	91.919	Paramormyrops_kingsleyae
ENSSFOG00015018128	-	59	93.103	ENSPMGG00000001234	sar1b	91	93.103	Periophthalmus_magnuspinnatus
ENSSFOG00015018128	-	100	85.075	ENSPMAG00000003593	sar1b	100	85.075	Petromyzon_marinus
ENSSFOG00015018128	-	100	91.919	ENSPFOG00000005666	sar1b	100	91.919	Poecilia_formosa
ENSSFOG00015018128	-	59	89.744	ENSPLAG00000001016	-	75	89.744	Poecilia_latipinna
ENSSFOG00015018128	-	100	92.424	ENSPLAG00000012223	sar1b	100	92.424	Poecilia_latipinna
ENSSFOG00015018128	-	100	91.919	ENSPMEG00000016831	sar1b	100	91.919	Poecilia_mexicana
ENSSFOG00015018128	-	60	88.983	ENSPREG00000002020	-	87	88.983	Poecilia_reticulata
ENSSFOG00015018128	-	100	91.919	ENSPREG00000005312	sar1b	90	91.919	Poecilia_reticulata
ENSSFOG00015018128	-	100	92.424	ENSPNYG00000012440	sar1b	100	92.424	Pundamilia_nyererei
ENSSFOG00015018128	-	100	86.364	ENSPNYG00000021357	-	100	86.364	Pundamilia_nyererei
ENSSFOG00015018128	-	100	87.374	ENSPNAG00000001123	-	100	87.374	Pygocentrus_nattereri
ENSSFOG00015018128	-	100	94.949	ENSPNAG00000014683	sar1b	100	94.949	Pygocentrus_nattereri
ENSSFOG00015018128	-	100	86.364	ENSSMAG00000002165	-	100	86.364	Scophthalmus_maximus
ENSSFOG00015018128	-	100	89.899	ENSSMAG00000007106	sar1b	80	89.899	Scophthalmus_maximus
ENSSFOG00015018128	-	100	92.424	ENSSDUG00000020926	sar1b	100	92.424	Seriola_dumerili
ENSSFOG00015018128	-	100	85.859	ENSSDUG00000019629	-	100	85.859	Seriola_dumerili
ENSSFOG00015018128	-	100	85.859	ENSSLDG00000024197	-	100	85.859	Seriola_lalandi_dorsalis
ENSSFOG00015018128	-	100	92.424	ENSSLDG00000017052	sar1b	100	92.424	Seriola_lalandi_dorsalis
ENSSFOG00015018128	-	100	93.434	ENSSPUG00000010247	-	100	93.434	Sphenodon_punctatus
ENSSFOG00015018128	-	100	91.919	ENSSPAG00000017634	sar1b	100	91.919	Stegastes_partitus
ENSSFOG00015018128	-	100	85.859	ENSSPAG00000015626	-	100	85.859	Stegastes_partitus
ENSSFOG00015018128	-	100	88.384	ENSTRUG00000023908	sar1b	100	88.384	Takifugu_rubripes
ENSSFOG00015018128	-	100	88.889	ENSTNIG00000016097	sar1b	100	88.889	Tetraodon_nigroviridis
ENSSFOG00015018128	-	90	92.135	ENSXCOG00000004160	sar1b	87	92.135	Xiphophorus_couchianus
ENSSFOG00015018128	-	61	87.500	ENSXCOG00000006154	-	81	87.500	Xiphophorus_couchianus
ENSSFOG00015018128	-	100	91.919	ENSXMAG00000008294	sar1b	100	91.919	Xiphophorus_maculatus