EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015018522 (Gene tree)
Gene ID: 108938676
Gene Symbol: ppargc1a (1 of many)
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 33659 bases
Position: chrKV411175.1:1761705-1795363
Accession: 108938676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015028870	RRM_1	PF00076.22	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015029199	-	2409	XM_018759498	ENSSFOP00015028870	802 (aa)	XP_018615014	-

Gene Model

Click here to download ENSSFOG00015018522's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04371	Apelin signaling pathway	KEGG
sfm04910	Insulin signaling pathway	KEGG
sfm04920	Adipocytokine signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015018522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015018522	ppargc1a	66	73.913	ENSAPOG00000018632	ppargc1a	85	70.485	Acanthochromis_polyacanthus
ENSSFOG00015018522	ppargc1a	70	53.356	ENSACIG00000009732	ppargc1a	100	53.529	Amphilophus_citrinellus
ENSSFOG00015018522	ppargc1a	66	74.534	ENSAOCG00000006754	ppargc1a	100	54.123	Amphiprion_ocellaris
ENSSFOG00015018522	ppargc1a	70	53.377	ENSAPEG00000022574	ppargc1a	100	53.935	Amphiprion_percula
ENSSFOG00015018522	ppargc1a	90	74.534	ENSACLG00000001002	ppargc1a	100	51.103	Astatotilapia_calliptera
ENSSFOG00015018522	ppargc1a	98	53.731	ENSAMXG00000002461	ppargc1a	99	55.404	Astyanax_mexicanus
ENSSFOG00015018522	ppargc1a	60	51.961	ENSCAFG00000018275	PPARGC1B	53	48.333	Canis_familiaris
ENSSFOG00015018522	ppargc1a	91	65.839	ENSCHIG00000015991	PPARGC1A	100	48.517	Capra_hircus
ENSSFOG00015018522	ppargc1a	92	66.460	ENSCCAG00000024681	PPARGC1A	86	66.460	Cebus_capucinus
ENSSFOG00015018522	ppargc1a	72	48.768	ENSCATG00000032575	PPARGC1A	67	48.084	Cercocebus_atys
ENSSFOG00015018522	ppargc1a	72	48.604	ENSCANG00000033426	PPARGC1A	67	48.084	Colobus_angolensis_palliatus
ENSSFOG00015018522	ppargc1a	66	72.671	ENSCSEG00000006884	ppargc1a	77	71.311	Cynoglossus_semilaevis
ENSSFOG00015018522	ppargc1a	94	61.702	ENSCVAG00000016547	ppargc1a	100	48.657	Cyprinodon_variegatus
ENSSFOG00015018522	ppargc1a	67	51.261	ENSDORG00000012605	Ppargc1b	51	51.261	Dipodomys_ordii
ENSSFOG00015018522	ppargc1a	72	49.079	ENSECAG00000009164	PPARGC1A	95	45.216	Equus_caballus
ENSSFOG00015018522	ppargc1a	100	52.750	ENSELUG00000017027	ppargc1a	100	53.378	Esox_lucius
ENSSFOG00015018522	ppargc1a	90	71.429	ENSFHEG00000021990	ppargc1a	100	53.044	Fundulus_heteroclitus
ENSSFOG00015018522	ppargc1a	70	53.202	ENSGAFG00000015514	ppargc1a	100	53.172	Gambusia_affinis
ENSSFOG00015018522	ppargc1a	99	46.931	ENSGAGG00000007043	PPARGC1A	100	45.714	Gopherus_agassizii
ENSSFOG00015018522	ppargc1a	72	48.604	ENSGGOG00000009810	PPARGC1A	67	48.084	Gorilla_gorilla
ENSSFOG00015018522	ppargc1a	90	74.534	ENSHBUG00000005269	ppargc1a	100	51.462	Haplochromis_burtoni
ENSSFOG00015018522	ppargc1a	54	52.041	ENSHGLG00000005967	PPARGC1B	51	45.000	Heterocephalus_glaber_female
ENSSFOG00015018522	ppargc1a	52	61.039	ENSHCOG00000014886	ppargc1a	66	46.217	Hippocampus_comes
ENSSFOG00015018522	ppargc1a	94	70.782	ENSIPUG00000020313	ppargc1a	70	70.782	Ictalurus_punctatus
ENSSFOG00015018522	ppargc1a	70	46.565	ENSSTOG00000024758	PPARGC1B	54	49.167	Ictidomys_tridecemlineatus
ENSSFOG00015018522	ppargc1a	90	72.671	ENSKMAG00000005390	ppargc1a	100	49.682	Kryptolebias_marmoratus
ENSSFOG00015018522	ppargc1a	70	56.230	ENSLBEG00000019562	ppargc1a	86	71.193	Labrus_bergylta
ENSSFOG00015018522	ppargc1a	72	48.604	ENSMFAG00000000534	PPARGC1A	67	47.909	Macaca_fascicularis
ENSSFOG00015018522	ppargc1a	62	54.082	ENSMNEG00000034121	PPARGC1B	55	50.000	Macaca_nemestrina
ENSSFOG00015018522	ppargc1a	72	48.604	ENSMNEG00000028682	PPARGC1A	67	47.909	Macaca_nemestrina
ENSSFOG00015018522	ppargc1a	72	48.768	ENSMLEG00000034233	PPARGC1A	67	48.084	Mandrillus_leucophaeus
ENSSFOG00015018522	ppargc1a	66	74.534	ENSMZEG00005001739	ppargc1a	60	70.902	Maylandia_zebra
ENSSFOG00015018522	ppargc1a	90	74.534	ENSMMOG00000011847	ppargc1a	100	50.164	Mola_mola
ENSSFOG00015018522	ppargc1a	72	50.673	ENSMODG00000000549	PPARGC1A	100	47.971	Monodelphis_domestica
ENSSFOG00015018522	ppargc1a	56	71.311	ENSMALG00000004625	ppargc1a	76	70.082	Monopterus_albus
ENSSFOG00015018522	ppargc1a	69	45.455	ENSNGAG00000016998	Ppargc1b	53	46.094	Nannospalax_galili
ENSSFOG00015018522	ppargc1a	90	74.534	ENSNBRG00000023403	ppargc1a	100	51.821	Neolamprologus_brichardi
ENSSFOG00015018522	ppargc1a	72	50.000	ENSOANG00000006680	PPARGC1A	100	49.041	Ornithorhynchus_anatinus
ENSSFOG00015018522	ppargc1a	67	73.292	ENSORLG00000004788	ppargc1a	100	51.326	Oryzias_latipes
ENSSFOG00015018522	ppargc1a	67	73.292	ENSORLG00020014690	ppargc1a	100	52.826	Oryzias_latipes_hni
ENSSFOG00015018522	ppargc1a	73	73.913	ENSORLG00015012206	ppargc1a	100	50.753	Oryzias_latipes_hsok
ENSSFOG00015018522	ppargc1a	90	73.292	ENSOMEG00000000670	ppargc1a	100	52.839	Oryzias_melastigma
ENSSFOG00015018522	ppargc1a	72	48.344	ENSPANG00000005420	PPARGC1A	67	47.120	Papio_anubis
ENSSFOG00015018522	ppargc1a	70	43.478	ENSPSIG00000008358	PPARGC1B	53	43.077	Pelodiscus_sinensis
ENSSFOG00015018522	ppargc1a	72	48.915	ENSPEMG00000010892	Ppargc1a	100	47.518	Peromyscus_maniculatus_bairdii
ENSSFOG00015018522	ppargc1a	100	49.461	ENSPCIG00000015835	PPARGC1A	100	49.161	Phascolarctos_cinereus
ENSSFOG00015018522	ppargc1a	51	59.368	ENSPLAG00000002827	ppargc1a	100	49.943	Poecilia_latipinna
ENSSFOG00015018522	ppargc1a	68	75.566	ENSPMEG00000000720	ppargc1a	60	69.959	Poecilia_mexicana
ENSSFOG00015018522	ppargc1a	100	52.254	ENSPREG00000019171	ppargc1a	100	52.771	Poecilia_reticulata
ENSSFOG00015018522	ppargc1a	56	54.082	ENSPPYG00000015938	PPARGC1B	54	52.101	Pongo_abelii
ENSSFOG00015018522	ppargc1a	72	48.167	ENSPCOG00000022858	PPARGC1A	67	48.168	Propithecus_coquereli
ENSSFOG00015018522	ppargc1a	90	74.534	ENSPNYG00000006846	ppargc1a	100	51.696	Pundamilia_nyererei
ENSSFOG00015018522	ppargc1a	100	52.619	ENSPNAG00000010393	ppargc1a	90	72.671	Pygocentrus_nattereri
ENSSFOG00015018522	ppargc1a	72	48.933	ENSRBIG00000032333	PPARGC1A	100	47.199	Rhinopithecus_bieti
ENSSFOG00015018522	ppargc1a	72	48.933	ENSRROG00000010419	PPARGC1A	100	47.199	Rhinopithecus_roxellana
ENSSFOG00015018522	ppargc1a	57	52.041	ENSSBOG00000028738	PPARGC1B	62	37.255	Saimiri_boliviensis_boliviensis
ENSSFOG00015018522	ppargc1a	72	49.747	ENSSHAG00000010033	PPARGC1A	96	49.104	Sarcophilus_harrisii
ENSSFOG00015018522	ppargc1a	100	52.614	ENSSLDG00000006987	ppargc1a	100	52.643	Seriola_lalandi_dorsalis
ENSSFOG00015018522	ppargc1a	88	71.200	ENSSARG00000000575	PPARGC1A	83	71.200	Sorex_araneus
ENSSFOG00015018522	ppargc1a	92	67.081	ENSSPUG00000013556	PPARGC1A	87	67.081	Sphenodon_punctatus
ENSSFOG00015018522	ppargc1a	91	72.353	ENSSPAG00000023514	ppargc1a	100	54.095	Stegastes_partitus
ENSSFOG00015018522	ppargc1a	81	42.484	ENSVVUG00000014358	PPARGC1B	54	48.333	Vulpes_vulpes
ENSSFOG00015018522	ppargc1a	72	46.612	ENSXETG00000020468	ppargc1a	100	45.509	Xenopus_tropicalis